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Qian X, Zhang H, Zheng M, Li C, Wang J, Huang H, Deng K. A dual-mode strategy based on β-galactosidase and target-induced DNA polymerase protection for transcription factor detection using colorimetry and a glucose meter. Analyst 2023; 148:6078-6086. [PMID: 37909394 DOI: 10.1039/d3an01414b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2023]
Abstract
In this work, we report a novel dual-mode method for the highly specific and sensitive detection of transcription factors (TFs) via the integration of Klenow polymerase protection induced by target-specific recognition, cascade-signal amplification using the hybridization chain reaction (HCR) and CRISPR/Cas12a system, and dual-signal transduction mediated by β-galactosidase (β-gal) and two substrates. A dual-mode signal-sensing interface was constructed by immobilizing the oligo DNA probe (P1) tethered β-gal in a 96-well plate. A hairpin H1 with the ability to initiate HCRs was designed to contain the TF binding site. The binding between the TF and H1 protected the H1 from being extended by the Klenow fragment. After thermal denaturation, the reserved H1 launched the HCR and the HCR products activated CRISPR/Cas12a to cleave P1 and reduce the β-gal on the sensing interface, and thus the contents of the TFs and the corresponding signals mediated by the catalysis of β-gal showed a correlation. This work was the first attempt at utilizing β-gal for dual-signal transduction. It is a pioneering study to utilize the HCR-CRISPR/Cas12a system for dual-mode TF sensors. It revealed that DNA polymerase protection through the binding of TF and DNA could be applied as a new pattern to develop TF sensors.
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Affiliation(s)
- Xinmei Qian
- Key Laboratory of Theoretical Organic Chemistry and Function Molecule, Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, China.
- Hunan Provincial Key Laboratory of Controllable Preparation and Functional Application of Fine Polymers, Hunan Provincial Key Laboratory of Advanced Materials for New Energy Storage and Conversion, School of Chemistry and Chemical Engineering, Hunan University of Science and Technology, Xiangtan 411201, China
| | - Heng Zhang
- Hunan Provincial Key Laboratory of Controllable Preparation and Functional Application of Fine Polymers, Hunan Provincial Key Laboratory of Advanced Materials for New Energy Storage and Conversion, School of Chemistry and Chemical Engineering, Hunan University of Science and Technology, Xiangtan 411201, China
| | - Mingyu Zheng
- Key Laboratory of Theoretical Organic Chemistry and Function Molecule, Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, China.
| | - Chunxiang Li
- Hunan Provincial Key Laboratory of Controllable Preparation and Functional Application of Fine Polymers, Hunan Provincial Key Laboratory of Advanced Materials for New Energy Storage and Conversion, School of Chemistry and Chemical Engineering, Hunan University of Science and Technology, Xiangtan 411201, China
| | - Jinglun Wang
- Hunan Provincial Key Laboratory of Controllable Preparation and Functional Application of Fine Polymers, Hunan Provincial Key Laboratory of Advanced Materials for New Energy Storage and Conversion, School of Chemistry and Chemical Engineering, Hunan University of Science and Technology, Xiangtan 411201, China
| | - Haowen Huang
- Key Laboratory of Theoretical Organic Chemistry and Function Molecule, Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, China.
| | - Keqin Deng
- Key Laboratory of Theoretical Organic Chemistry and Function Molecule, Ministry of Education, Hunan University of Science and Technology, Xiangtan 411201, China.
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Anchoring lactase in pectin-based hydrogels for lactose hydrolysis reactions. Process Biochem 2022. [DOI: 10.1016/j.procbio.2022.08.026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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3
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Ming S, Li S, Chen Z, Chen X, Wang F, Deng S, Marszałek K, Zhu Z, Zhang W, Barba FJ. Bioinspired Lipase Immobilized Membrane for Improving Hesperidin Lipophilization. Antioxidants (Basel) 2022; 11:1906. [PMID: 36290627 PMCID: PMC9598331 DOI: 10.3390/antiox11101906] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2022] [Revised: 09/21/2022] [Accepted: 09/22/2022] [Indexed: 07/29/2023] Open
Abstract
Lipophilization is a promising way to improve the bioavailability of flavonoids. However, the traditional enzymatic esterification methods are time-consuming, and present low yields and purity. Herein, a novel membrane-based lipophilization technology-bioinspired lipase immobilized membranes (BLIMs), including CAL-B@PES, CAL-B@PDA/PES and GA/CAL-B@PDA/PES- were fabricated to improve the antioxidant flavanone glycoside hesperidin lipophilization. Via reverse filtration, PDA coating and GA crosslinking, Candida antarctica lipase B (CAL-B) was stably immobilized on membrane to fabricate BLIMs. Among the three BLIMs, GA/CAL-B@PDA/PES had the greatest enzyme activity and enzyme loading, the strongest tolerance of changes in external environmental conditions (temperatures, pH, heating time, storage time and numbers of cycles) and the highest hesperidin esterification efficiency. Moreover, the optimal operating condition for GA/CAL-B@PDA/PES fabrication was the CAL-B concentration of 0.36 mg/mL, operation pressure of 2 bar, GA concentration of 5% and crosslinking time of 1 h. Afterwards, the hesperidin esterification process did not affect the micromorphology of BLIM, but clearly improved the BLIM permeability and esterified product efficiency. The present study reveals the fabrication mechanism of BLIMs and offers insights into the optimizing strategy that governs the membrane-based lipophilization technology process.
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Affiliation(s)
- Shanxiu Ming
- National R&D Center for Se-Rich Agricultural Products Processing Technology, Hubei Engineering Research Center for Deep Processing of Green Se-Rich Agricultural Products, School of Modern Industry for Selenium Science and Engineering, Wuhan Polytechnic University, Wuhan 430205, China
| | - Shuyi Li
- National R&D Center for Se-Rich Agricultural Products Processing Technology, Hubei Engineering Research Center for Deep Processing of Green Se-Rich Agricultural Products, School of Modern Industry for Selenium Science and Engineering, Wuhan Polytechnic University, Wuhan 430205, China
| | - Zhe Chen
- National R&D Center for Se-Rich Agricultural Products Processing Technology, Hubei Engineering Research Center for Deep Processing of Green Se-Rich Agricultural Products, School of Modern Industry for Selenium Science and Engineering, Wuhan Polytechnic University, Wuhan 430205, China
| | - Xujun Chen
- National R&D Center for Se-Rich Agricultural Products Processing Technology, Hubei Engineering Research Center for Deep Processing of Green Se-Rich Agricultural Products, School of Modern Industry for Selenium Science and Engineering, Wuhan Polytechnic University, Wuhan 430205, China
| | - Feifei Wang
- National R&D Center for Se-Rich Agricultural Products Processing Technology, Hubei Engineering Research Center for Deep Processing of Green Se-Rich Agricultural Products, School of Modern Industry for Selenium Science and Engineering, Wuhan Polytechnic University, Wuhan 430205, China
| | - Shaonan Deng
- Hubei Nanbai Shengtainongye Co., Ltd., Enshi 445000, China
| | - Krystian Marszałek
- Prof. Wacław Dąbrowski Institute of Agricultural and Food Biotechnology—State Research Institute, Department of Fruit and Vegetable Product Technology, 36 Rakowiecka St., 02-532 Warsaw, Poland
- Department of Food Technology and Human Nutrition, Institute of Food Technology and Nutrition, College of Natural Science, University of Rzeszow, Zelwerowicza 2D, 35-601 Rzeszow, Poland
| | - Zhenzhou Zhu
- National R&D Center for Se-Rich Agricultural Products Processing Technology, Hubei Engineering Research Center for Deep Processing of Green Se-Rich Agricultural Products, School of Modern Industry for Selenium Science and Engineering, Wuhan Polytechnic University, Wuhan 430205, China
| | - Wenxiang Zhang
- Biological and Environmental Science and Engineering Division, Water Desalination and Reuse Research Center, King Abdullah University of Science and Technology, Riyadh 11543, Saudi Arabia
| | - Francisco J. Barba
- Department of Preventive Medicine and Public Health, Food Science, Toxicology and Forensic Medicine, Faculty of Pharmacy, University of Valencia, 46100 Valencia, Spain
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Jin C, Li N, Lin E, Chen X, Wang T, Wang Y, Yang M, Liu W, Yu J, Zhang Z, Chen Y. Enzyme Immobilization in Porphyrinic Covalent Organic Frameworks for Photoenzymatic Asymmetric Catalysis. ACS Catal 2022. [DOI: 10.1021/acscatal.2c01114] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Chaonan Jin
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Ning Li
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
| | - En Lin
- College of Chemistry, Nankai University, Tianjin 300071, China
| | - Xuepeng Chen
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Ting Wang
- College of Chemistry, Nankai University, Tianjin 300071, China
| | - Yan Wang
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Mingfang Yang
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Wansheng Liu
- College of Chemistry, Nankai University, Tianjin 300071, China
| | - Jiangyue Yu
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Zhenjie Zhang
- College of Chemistry, Nankai University, Tianjin 300071, China
| | - Yao Chen
- State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, Tianjin 300071, China
- National Institute for Advanced Materials, Nankai University, Tianjin 300071, China
- Frontiers Science Center for Cell Responses, Nankai University, Tianjin 300071, China
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Hanauer DC, de Souza AG, Cargnin MA, Gasparin BC, Rosa DDS, Paulino AT. Pectin-based biohydrogels reinforced with eucalyptus sawdust: Synthesis, characterization, β-D-Galactosidase immobilization and activity. J IND ENG CHEM 2021. [DOI: 10.1016/j.jiec.2021.02.022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Todea A, Benea IC, Bîtcan I, Péter F, Klébert S, Feczkó T, Károly Z, Biró E. One-pot biocatalytic conversion of lactose to gluconic acid and galacto-oligosaccharides using immobilized β-galactosidase and glucose oxidase. Catal Today 2021. [DOI: 10.1016/j.cattod.2020.06.090] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Verma N, Saini R, Gahlaut A, Hooda V. Stabilization and optimization of purified diamine oxidase by immobilization onto activated PVC membrane. FOOD BIOTECHNOL 2020. [DOI: 10.1080/08905436.2020.1833912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Neelam Verma
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Rajni Saini
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Anjum Gahlaut
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Vikas Hooda
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
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Verma N, Sisodiya L, Gahlaut A, Hooda V, Hooda V. Novel approach using activated cellulose film for efficient immobilization of purified diamine oxidase to enhance enzyme performance and stability. Prep Biochem Biotechnol 2020; 50:468-476. [PMID: 32267204 DOI: 10.1080/10826068.2019.1709976] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Abstract
The presence of various contaminants in foodstuffs has led to serious public health concerns. Diamine oxidase (DAO) has attracted tremendous attention for guarding food safety as well as clinical and environmental industries. In this study, DAO from Pisum sativum (Pea) seedlings was extracted and purified by dialysis and gel filtration. Purified DAO was covalently immobilized onto the surface of nitrocellulose membrane using glutaraldehyde. The obtained bioaffinity support has efficiently shown high yield immobilization of DAO from pea seedlings. The optimal conditions of free and immobilized DAO activity were evaluated against the substrate, Putrescine dihydrochloride. The influence of pH, temperature, storage stability, and reusability of immobilized enzyme with comparison to the free enzyme was studied and the results showed that the stabilities were significantly enhanced compared with free counterpart. Residual activity of the immobilized enzyme was 59% of the initial activity after being recycled 10 times. We approve that this novel low cost immobilized DAO carrier presents a new approach in large scale applications.
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Affiliation(s)
- Neelam Verma
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Lovely Sisodiya
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Anjum Gahlaut
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Vinita Hooda
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
| | - Vikas Hooda
- Centre for Biotechnology, Maharshi Dayanand University, Rohtak, India
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Sigurdardóttir SB, Lehmann J, Ovtar S, Grivel J, Negra MD, Kaiser A, Pinelo M. Enzyme Immobilization on Inorganic Surfaces for Membrane Reactor Applications: Mass Transfer Challenges, Enzyme Leakage and Reuse of Materials. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201800307] [Citation(s) in RCA: 85] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Sigyn Björk Sigurdardóttir
- Technical University of DenmarkDTU Chemical Engineering Søltofts Plads, Building 229 2800 Kgs. Lyngby Denmark
| | - Jonas Lehmann
- Technical University of DenmarkDTU Energy Frederiksborgvej 399 4000 Roskilde Denmark
| | - Simona Ovtar
- Technical University of DenmarkDTU Energy Frederiksborgvej 399 4000 Roskilde Denmark
| | - Jean‐Claude Grivel
- Technical University of DenmarkDTU Energy Frederiksborgvej 399 4000 Roskilde Denmark
| | - Michela Della Negra
- Technical University of DenmarkDTU Energy Frederiksborgvej 399 4000 Roskilde Denmark
| | - Andreas Kaiser
- Technical University of DenmarkDTU Energy Frederiksborgvej 399 4000 Roskilde Denmark
| | - Manuel Pinelo
- Technical University of DenmarkDTU Chemical Engineering Søltofts Plads, Building 229 2800 Kgs. Lyngby Denmark
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Covalent immobilization of organophosphorus hydrolase enzyme on chemically modified cellulose microfibers: Statistical optimization and characterization. REACT FUNCT POLYM 2018. [DOI: 10.1016/j.reactfunctpolym.2018.01.019] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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Tavano OL, Berenguer-Murcia A, Secundo F, Fernandez-Lafuente R. Biotechnological Applications of Proteases in Food Technology. Compr Rev Food Sci Food Saf 2018; 17:412-436. [DOI: 10.1111/1541-4337.12326] [Citation(s) in RCA: 123] [Impact Index Per Article: 20.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2017] [Revised: 11/22/2017] [Accepted: 11/24/2017] [Indexed: 12/26/2022]
Affiliation(s)
- Olga Luisa Tavano
- Faculty of Nutrition; Alfenas Federal Univ.; 700 Gabriel Monteiro da Silva St Alfenas MG 37130-000 Brazil
| | - Angel Berenguer-Murcia
- Inorganic Chemistry Dept. and Materials Science Inst.; Alicante Univ.; Ap. 99 E-03080 Alicante Spain
| | - Francesco Secundo
- Istit. di Chimica del Riconoscimento Molecolare; CNR; v. Mario Bianco 9 20131 Milan Italy
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Dolinina E, Vlasenkova M, Parfenyuk E. Effect of trehalose on structural state of bovine serum albumin adsorbed onto mesoporous silica and the protein release kinetics in vitro. Colloids Surf A Physicochem Eng Asp 2017. [DOI: 10.1016/j.colsurfa.2017.05.014] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Márquez A, Kocsis K, Zickler G, Bourret GR, Feinle A, Hüsing N, Himly M, Duschl A, Berger T, Diwald O. Enzyme adsorption-induced activity changes: a quantitative study on TiO 2 model agglomerates. J Nanobiotechnology 2017; 15:55. [PMID: 28732539 PMCID: PMC5521066 DOI: 10.1186/s12951-017-0283-4] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2017] [Accepted: 06/16/2017] [Indexed: 11/17/2022] Open
Abstract
Background Activity retention upon enzyme adsorption on inorganic nanostructures depends on different system parameters such as structure and composition of the support, composition of the medium as well as enzyme loading. Qualitative and quantitative characterization work, which aims at an elucidation of the microscopic details governing enzymatic activity, requires well-defined model systems. Results Vapor phase-grown and thermally processed anatase TiO2 nanoparticle powders were transformed into aqueous particle dispersions and characterized by dynamic light scattering and laser Doppler electrophoresis. Addition of β-galactosidase (β-gal) to these dispersions leads to complete enzyme adsorption and the generation of β-gal/TiO2 heteroaggregates. For low enzyme loadings (~4% of the theoretical monolayer coverage) we observed a dramatic activity loss in enzymatic activity by a factor of 60–100 in comparison to that of the free enzyme in solution. Parallel ATR-IR-spectroscopic characterization of β-gal/TiO2 heteroaggregates reveals an adsorption-induced decrease of the β-sheet content and the formation of random structures leading to the deterioration of the active site. Conclusions The study underlines that robust qualitative and quantitative statements about enzyme adsorption and activity retention require the use of model systems such as anatase TiO2 nanoparticle agglomerates featuring well-defined structural and compositional properties. Electronic supplementary material The online version of this article (doi:10.1186/s12951-017-0283-4) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Augusto Márquez
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
| | - Krisztina Kocsis
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
| | - Gregor Zickler
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
| | - Gilles R Bourret
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
| | - Andrea Feinle
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
| | - Nicola Hüsing
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
| | - Martin Himly
- Department of Molecular Biology, Paris Lodron University of Salzburg, Hellbrunnerstrasse 34/III, 5020, Salzburg, Austria.
| | - Albert Duschl
- Department of Molecular Biology, Paris Lodron University of Salzburg, Hellbrunnerstrasse 34/III, 5020, Salzburg, Austria
| | - Thomas Berger
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria.
| | - Oliver Diwald
- Department of Chemistry and Physics of Materials, Paris Lodron University of Salzburg, Jakob-Haringer-Strasse 2a, 5020, Salzburg, Austria
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Banjanac K, Carević M, Ćorović M, Milivojević A, Prlainović N, Marinković A, Bezbradica D. Novel β-galactosidase nanobiocatalyst systems for application in the synthesis of bioactive galactosides. RSC Adv 2016. [DOI: 10.1039/c6ra20409k] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Amino modified nonporous fumed nano-silica particles was used for the development of efficient nanobiocatalysts for application in the biosynthesis of bioactive galactosides, galacto-oligosaccharides (GOS).
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Affiliation(s)
- Katarina Banjanac
- Department of Biochemical Engineering and Biotechnology
- Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | - Milica Carević
- Department of Biochemical Engineering and Biotechnology
- Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | - Marija Ćorović
- Department of Biochemical Engineering and Biotechnology
- Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | - Ana Milivojević
- Department of Biochemical Engineering and Biotechnology
- Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | - Nevena Prlainović
- Department of Organic Chemistry
- Innovation Center of Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | - Aleksandar Marinković
- Department of Organic Chemistry
- Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | - Dejan Bezbradica
- Department of Biochemical Engineering and Biotechnology
- Faculty of Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
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