DFT, IR, Raman and NMR study of the coordination ability of coumarin-3-carboxylic acid to Pr(III)

Synthesis, antimicrobial properties and in silico evaluation of coumarin derivatives mediated by 1,4-dibromobutane

In this study, monobrominated coumarins (5-6) and bis-coumarins (7-9) were synthesized from 3-carboxylic coumarin and 7-hydroxy-4-methyl coumarin using 1,4-dibromobutane as a binding agent, according to the synthesis procedures described in the literature. Amongst these coumarins, three are new compounds: monobrominated coumarin 5 and bis-coumarins 7 and 9. The structures of the synthesized coumarins were confirmed by FTIR, NMR and HRMS-ESI. In vitro antimicrobial evaluation of these coumarins against strains of twelve bacteria and four fungi revealed their bactericidal and fungicidal properties, with increased antibacterial activity for monocoumarins and improved antifungal activity for bis-coumarins. It was also found that the antibacterial activity was enhanced by the etheric bond, Br atom and alkyl chain and reduced by the ester bonds at position 3 of the pyrone ring or an additional coumarin unit, while the antifungal activity was reinforced by ester bonds and deactivated by the Br atom. For the first time, the in silico investigations of such coumarins were carried out and it was observed that they are less toxic, suitable for oral administration with good permeability through cell membrane, are able to circulate freely in the bloodstream and cross Blood-Brain-Barriers. Moreover, their molecular docking in DNA indicated stable coumarin-DNA complexes with good scores. The results of molecular dynamics simulations performed for 200 ns revealed the rigidity and stability of bis-coumarins (7-9) in the DNA binding pocket and predict that they are potent binders.Communicated by Ramaswamy H. Sarma.

Ratiometric fluorescence detection of sulfide ions based on lanthanide coordination polymer using guanosine diphosphate as ligand

The efficiency of energy transfer from guanine nucleotide to terbium ion (Tb³⁺) is affected by the phosphate group significantly. Compared with the biomolecules 5'-GMP (guanosine monophosphate), guanosine diphosphate (GDP) exhibits better sensitize ability to Tb³⁺ ions luminescence. Assisted with the carboxycoumarin ligand, we synthesized a more stable optical Coumarin@GDP-Tb polymer with the characteristic emission peaks located on 440 nm and 545 nm in this work. The Coumarin@GDP-Tb polymer is not only rich in metal binding sites, but also maintains a moderate ionic binding force, which helps metal ions to bind or leave it easily. Experiment result shows that Coumarin@GDP-Tb polymer has the appropriate binding force for Fe²⁺ ions, which can be destroyed by sulfur ions (S^2-) as the formation of FeS precipitation. Based on this, Coumarin@GDP-Tb was designed as the ratio fluorescence probe for sulfur ions detection, where the fluorescence at 545 nm can be selectively quenched by Fe²⁺ ions, while that at 440 nm was unaffected, in the presence of S^2- ions, the quenched fluorescence can be recovered remarkably. With the increasing S^2- ions from 0.1-45 μM, the ratio of fluorescence intensity at 545 nm to 440 nm (F₅₄₅/F₄₄₀) is linear to S^2- concentration, and the detection limit of S^2- was calculated to be 0.073 μM. Contrast to those fluorescence probes with single wavelength emission, Coumarin@GDP-Tb displays a comparable sensitivity, the introduced self-adjust wavelength improved the detection accuracy efficiently. The above 98.1 % recovery rates of S^2- ions in the actual water sample demonstrated the practicability of Coumarin@GDP-Tb fluorescence probe.

Energy transfer mechanism in luminescence Eu(III) and Tb(III) complexes of coumarin-3-carboxylic acid: A theoretical study

Excited state energy level diagrams of coumarin-3-carboxylic acid (HCCA) chromophore, Eu(CCA)Cl₂(H₂O)₂ (1), Eu(CCA)₂Cl(H₂O)₂ (2)_, Eu(CCA)₃(H₂O)₃ (3), Tb(CCA)₂Cl(H₂O) (4) and Tb(CCA)₂(NO₃)(H₂O) (5) in gas phase and polar solution have been calculated by means of DFT/TDDFT/ωB97XD methods. Based on these results, the ability of CCA to sensitize Eu(III) and Tb(III) luminescence has been examined. The competitive excited state processes in the complexes - fluorescence, intersystem crossing (ISC) and phosphorescence, were analyzed depending on the environment, number of the ligands, Ln(III) ion type (Eu and Tb) and counteranion (Cl^- and NO₃^-). It has been found that the environment altered the S₁ state energy, oscillator strength, fluorescence lifetime as well as the S₁ character - polar solution stabilized the S₁(ππ*) state, whereas non-polar solution (gas phase, solid state) stabilized the S₁(nπ*) state. The S₁(nπ*) state was decisive for the efficient energy transfer as it suppressed the S₁ emission of CCA and favored ISC or direct transfer to the emitting levels of Eu(III). The HCCA triplet (T₁) state minimum energy (~2.7, ~2.6^ZPE eV) and (ππ*) character were retained in Eu/Tb-CCA complexes regardless of the environment. The energy gap between the higher energy T₁ donor state and the acceptor levels ⁵D₁ of Eu(III) (~0.5 eV) and ⁵D₄ of Tb(III) (~0.1 eV) provided optimal resonance conditions for effective energy transfer for Eu(III), but less probability for Tb(III). The nonradiative energy (CCA → Eu(III)) transfer rates and quantum luminescence yield for 2 and 3 were calculated by a strategy combining DFT geometries, INDO/S excitation energies and calculated Judd-Ofelt parameters. The excitation channel T₁ → ⁵D₀ through an exchange mechanism was predicted as the most probable one to populate the main emissive Eu-centered state in complexes 2 and 3. The more efficient luminescence of 3 than that of 2 was discussed and explained.

Comparisons of the spectroscopic and microbiological activities among coumarin-3-carboxylate, o-phenanthroline and zinc(II) complexes

Coumarins (2H-chromen-2-one) are oxygen-containing heterocyclic compounds that belong to the benzopyranones family. In this work we have synthesized different coordination complexes with coumarin-3-carboxylic acid (HCCA), o-phenanthroline (phen) and zinc(II). In the reported [Zn(CCA)₂(H₂O)₂] complex, coumarin-3-carboxylate (CCA) is acting as a bidentate ligand while in the two prepared complexes, [Zn(phen)₃]CCA(NO₃) (obtained as a single crystal) and [Zn(CCA)₂phen].4H₂O, CCA is acting as a counterion of the complex cation [Zn(phen)₃]⁺² or coordinated to the metal center along with phen, respectively. These compounds were characterized on the basis of elemental analysis and thermogravimetry. NMR, FTIR and Raman spectroscopies of the compounds and the CCA potassium salt (KCCA) allow to determine several similarities and differences among them. Finally, their behavior against alkaline phosphatase enzyme and their antimicrobial activities were also measured.

Lanthanide and transition metal complexes of bioactive coumarins: molecular modeling and spectroscopic studies

The present paper summarizes theoretical and spectroscopic investigations on a series of active coumarins and their lanthanide and transition metal complexes with application in medicine and pharmacy. Molecular modeling as well as IR, Raman, NMR and electronic spectral simulations at different levels of theory were performed to obtain important molecular descriptors: total energy, formation energy, binding energy, stability, conformations, structural parameters, electron density distribution, molecular electrostatic potential, Fukui functions, atomic charges, and reactive indexes. The computations are performed both in gas phase and in solution with consideration of the solvent effect on the molecular structural and energetic parameters. The investigations have shown that the advanced computational methods are reliable for prediction of the metal-coumarin binding mode, electron density distribution, thermodynamic properties as well as the strength and nature of the metal-coumarin interaction (not experimentally accessible) and correctly interpret the experimental spectroscopic data. Known results from biological tests for cytotoxic, antimicrobial, anti-fungal, spasmolytic and anti-HIV activities on the studied metal complexes are reported and discussed.

Synthesis of terbium(III) complex with a biscoumarin derivative and its immobilization in PMMA-based composite thin films with fluorescent properties

An amorphous complex of Tb(III) with the biscoumarin derivative 3,3′-[(4-hydroxyphenyl)methylene)]bis-(4-hydroxy-2H-1-benzopyran-2-one), Tb(H2L)3, was successfully synthesized and characterized. IR- and 1H-NMR-spectroscopy were used to investigate the coordination of the ligand around the Tb(III) ion. Values for the quantum yield and the life time of the excited state of the complex were obtained. The complex was immobilized in transparent and flexible PMMA-based films by a simple casting technique. PMMA/chloroform solutions were used in synthetic procedures that resulted in both glass-supported and self-supporting nanocomposite films. The morphology of the films was studied by scanning electron microscopy, atomic force microscopy and transmission electron microscopy, showing the formation of crack-free films. The presence of the Tb(III) complex in the matrix was proven by the presence of characteristic bands in the IR spectra. Fluorescence microscopy and fluorescence spectroscopy demonstrated the promising optical properties of the films showing the characteristic emission bands of the Tb(III) ions. The longer life time of the excited state of the immobilized complex confirmed the protective role of the PMMA matrix on the optical properties of the complex. The composite films possessing optical properties have the potential for application as active components in optical devices.

2,4-Dichlorophenoxyacetic Acid Derived Schiff Base and Its Lanthanide(III) Complexes: Synthesis, Characterization, Spectroscopic Studies, and Plant Growth Activity

2,4-Dichlorophenoxyacetic acid derived Schiff base (HL) and its lanthanide [La(III), Pr(III), Nd(III), Sm(III), Eu(III), Gd(III), Dy(III), Y(III)] complexes were synthesized and characterized by various spectroscopic (1H,13C, DEPT and 2D HMQC NMR, FT-IR, UV-Vis, and mass) techniques and other analytical methods. HL exhibits “E” and “Z” isomerism and was confirmed by variable temperature1H NMR studies. The spectral and analytical data reveals the bidentate coordination of HL to lanthanide(III) ion, through carboxylic acid group via deprotonation. Fluorescence spectrum of europium complex shows bands at 578, 592, and 612 nm assignable toD05→F07,D05→F17, andD05→F27, respectively. Auxin activity of HL and lanthanum(III) complex on wheat seeds (Triticum durum) was measured at different concentrations. The percentage germination, root length, and shoot length were recorded. An enhancement in the plant growth activity of the ligand was observed on complexation and the best activity was observed at 10−6 M concentration.