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Rafik A, Lakhdar F, Zouihri H, Guedira T, Acharjee N, Islam MS, Salah M, Zeroual A. Exploring nonlinear optical properties in a hybrid dihydrogen phosphate system: an experimental and theoretical approach. J Mol Model 2024; 30:151. [PMID: 38668860 DOI: 10.1007/s00894-024-05936-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Accepted: 04/09/2024] [Indexed: 05/12/2024]
Abstract
CONTEXT The controlled slow evaporation process conducted at room temperature has produced a novel hybrid material denoted as (2-hydroxyethyl) trimethylammonium dihydrogen phosphate [2-HDETDHP] (C5H14NO+, H2PO4-), synthesized through the solution growth method. X-ray crystallography analysis reveals a triclinic structure with a filling rate of P and a Z value of 2. This hybrid material displays noteworthy absorption characteristics in the middle and far ultraviolet regions. UV-visible spectroscopy further establishes its transparency in the visible and near-visible ultraviolet domains. FT-IR spectroscopy examines various vibration modes, elucidating their relationships with the functional groups within the structure. Two- and three-dimensional fingerprint maps, coupled with three-dimensional crystal structures through Hirshfeld Surface Analysis, unveil the dominance of O•••H and H•••H interactions in the structure, comprising 49.40% and 50.40%, respectively. Fingerprint plots derived from the Hirshfeld surface assess the percentages of hydrogen bonding interactions, with 80.6% attributed to a fragment patch. The experiment of antimicrobial efficacy of a synthesized product, conducted in triplicate, demonstrated the synthesized product's potential antimicrobial activity. METHODS Hirshfeld surfaces are employed to investigate intermolecular hydrogen bonding, specifically within single phosphate groups. The molecular structure of 2-HDETDHP was refined using single-crystal X-ray analysis, while its optical characteristics were examined through UV-visible spectroscopy. FT-IR spectroscopy is employed for the assignment of molecular vibrations of functional groups in the affined structure. Quantum calculations were executed with the GAUSSIAN 09 software package at B3LYP/6-311G level of theory, to optimize the molecular geometries. The antimicrobial efficacy of a synthesized product was evaluated using the disc diffusion method against antibiotic-resistant Candida albicans, Candida tropicalis, Aspergillus niger, Staphylococcus aureus, and Escherichia coli. Microorganisms were cultured on nutrient agar, and inhibition zones were measured after incubation, with streptomycin and amphotericin as positive controls.
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Affiliation(s)
- Abdellatif Rafik
- Laboratory of Organic Chemistry, Catalysis and Environment Laboratory, Faculty of Science, Ibn Tofail University, Kenitra City, Morocco
| | - Fatima Lakhdar
- Laboratory of Marine Biotechnology and Environment-CNRST Labeled Research Unit, Faculty of Sciences, Chouaib Doukkali University, BP 20, 24000, El Jadida, Morocco
| | - Hafid Zouihri
- Laboratory of Materials Chemistry and Biotechnology of Natural Products, Moulay Ismail University of Meknes, Faculty of Sciences, Meknes, Morocco
| | - Taoufiq Guedira
- Laboratory of Organic Chemistry, Catalysis and Environment Laboratory, Faculty of Science, Ibn Tofail University, Kenitra City, Morocco
| | - Nivedita Acharjee
- Department of Chemistry, Durgapur Government College, Durgapur, West Bengal, India
| | | | - Mohammed Salah
- Molecular Modeling and Spectroscopy Research Team, Department of Chemistry, Faculty of Sciences, Chouaïb Doukkali University, El Jadida, Morocco.
| | - Abdellah Zeroual
- Molecular Modeling and Spectroscopy Research Team, Department of Chemistry, Faculty of Sciences, Chouaïb Doukkali University, El Jadida, Morocco
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Combined experimental and theoretical investigations on 9-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,9-dihydro-6H-purin-6-one 4-nitrophenol (IPNP) molecule. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Experimental and Hirshfeld Surface Investigations for Unexpected Aminophenazone Cocrystal Formation under Thiourea Reaction Conditions via Possible Enamine Assisted Rearrangement. CRYSTALS 2022. [DOI: 10.3390/cryst12050608] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Considering the astounding biomedicine properties of pharmaceutically active drug, 4-aminophenazone, also known as 4-aminoantipyrine, the work reported in this manuscript details the formation of novel cocrystals of rearranged 4-aminophenazone and 4-nitro-N-(4-nitrobenzoyl) benzamide in 1:1 stoichiometry under employed conditions for thiourea synthesis by exploiting the use of its active amino component. However, detailed analysis via various characterization techniques such as FT-IR, nuclear magnetic resonance spectroscopy and single crystal XRD, for this unforeseen, but useful cocrystalline synthetic adduct (4 and 5) prompted us to delve into its mechanistic pathway under provided reaction conditions. The coformer 4-nitro-N-(4-nitrobenzoyl) benzamide originates via nucleophilic addition reaction following tetrahedral mechanism between para-nitro substituted benzoyl amide and its acid halide (1). While the enamine nucleophilic addition reaction by 4-aminophenazone on 4-nitrosubstituted aroyl isothiocyanates under reflux temperature suggests the emergence of rearranged counterpart of cocrystal named N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carbonothioyl)-4-nitrobenzamide. Crystallographic studies reveal triclinic system P-1 space group for cocrystal (4 and 5) and depicts two different crystallographically independent molecules with prominent C–H···O and N–H···O hydrogen bonding effective for structure stabilization. Hirshfeld surface analysis also displays hydrogen bonding and van der Waals interactions as dominant interactions in crystal packing. Further insight into the cocrystal synthetic methodologies supported the occurrence of solution-based evaporation/cocrystallization methodology in our case during purification step, promoting the synthesis of this first-ever reported novel cocrystal of 4-aminophenazone with promising future application in medicinal industry.
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Siva V, Chitra Devi A, Thangarasu S, Viswanathan T, Athimoolam S, Bahadur SA. Design, structural, DFT, molecular docking studies and biological evaluation of 4-aminiumantipyrine dihydrogenphosphate monohydrate. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131866] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Chen B, Ye W, Li Z, Jin S, Wang J, Guo M, Wang D. Structures of four organic acid-base adducts from 4-aminoantipyrine, 3,5-dinitrobenzoic acid, anthranilic acid, 5-nitrosalicylic acid, and 1, 5-naphthalenedisulfonic acid. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131602] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Chitra Devi A, Siva V, Thangarasu S, Athimoolam S, Asath Bahadur S. Supramolecular architecture, thermal, Quantum chemical analysis and in vitro biological properties on sulfate salt of 4-aminoantipyrine. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.131033] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Sivaraj G, Jayamani N, Siva V. Structural, spectroscopic, physical properties and quantum chemical investigation on bromide salt of 4-dimethylaminopyridine NLO material for optoelectronic applications. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128242] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Ruelas-Ávila ME, Cruz-Enríquez A, Campos-Gaxiola JJ, Baldenebro-López J, Höpfl H, Miranda-Soto V, Glossman-Mitnik D. Crystal structure, Hirshfeld surface, DFT calculations and photophysical properties of 2,4,5-tris(4-pyridyl)imidazole hydrogen chloride. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128175] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Saiadali Fathima K, Sathiyendran M, Anitha K. Structure elucidation, biological evaluation and molecular docking studies on a new organic salt: 2-Aminobenzimidazolium 5-nitro-2-hydroxybenzoate. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.09.059] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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Smith MG, Lemmerer A. Novel crystal forms of 4-aminoantipyrine and its derivatives: Co-crystallizing a reluctant molecule. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.07.062] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Tamil Elakkiya M, PremKumar S, Sathiyendran M, Suresh P, Shanmugaiah V, Anitha K. Structural, spectral, computational, thermal and antibacterial studies on a co-crystal: 2-Aminopyrazine phthalic acid. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.07.022] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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K SF, M S, K A. Structural investigation and molecular docking studies of 2-amino-1H-benzimidazolium 2-hydroxybenzoate and 2-amino-1H-benzimidazolium pyridine 2-carboxylate single crystal. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2018; 91:103-114. [PMID: 30033237 DOI: 10.1016/j.msec.2018.05.035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Revised: 04/18/2018] [Accepted: 05/08/2018] [Indexed: 10/16/2022]
Abstract
The molecular complexes of 2-amino-1H-benzimidazolium 2-hydroxybenzoate (2ABHB) and 2-amino-1H-benzimidazolium pyridine 2-carboxylate (2ABP2C) were synthesised from a donor 2-aminobenzimidazole (2AB), and acceptors, 2-hydroxybenzoate (2HB) and pyridine 2-carboxylic acid (P2C) respectively. The brown colour single crystals were successfully grown by slow evaporation solution growth technique. The densities of grown crystals 2ABHB and 2ABP2C were measured by floatation method using carbon tetrachloride and xylene as solvents. The single crystal X-ray diffraction reveals the molecular structures of compounds 2ABHB and 2ABP2C. Both the structures contain positively charged 2-aminobenzimidazolium cation, 2ABHB contains negatively charged 2-hydroxybenzoate anion and 2ABP2C contains pyridine 2 carboxylic acid anions. 1H and 13C NMR spectral analyses were used to predict the presence of proton and carbon in the title compounds. The FTIR and Raman spectra have been recorded to detect the vibrational modes of functional groups present in the 2ABHB and 2ABP2C compounds. The proton transfer between the cation and anion was confirmed by UV-Vis spectra of both compounds. For both the compounds, thermal behaviour and stability of the crystals were studied using thermogravimetric and differential thermal analyses technique respectively. Further, the anti-bacterial activity of 2ABHB and 2ABP2C complex against Staphylococcus aureus, Klebsiella pneumonia, Pseudomonas eruginos and E. coli pathogens were investigated.
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Affiliation(s)
- Saiadali Fathima K
- CAD4 Laboratory, Department of Physics, School of Physics, Madurai Kamaraj University, Madurai 625021, Tamilnadu, India
| | - Sathiyendran M
- Chemistry Research Centre, National Engineering College, Kovilpatti 628503, Tamilnadu, India
| | - Anitha K
- CAD4 Laboratory, Department of Physics, School of Physics, Madurai Kamaraj University, Madurai 625021, Tamilnadu, India.
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Synthesis, growth and characterization of L-Phenylalaninium methanesulfonate nonlinear optical single crystal. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.11.065] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Athira L, Lakshmi CN, Balachandran S, Arul Dhas D, Hubert Joe I. Synthesis, characterization, crystal structure and theoretical studies of 4-[(E)-(3-chloro-4-hydroxyphenyl) diazenyl]-1, 5-dimethyl-2-phenyl-1, 2-dihydro-3H-pyrazol-3-one. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.07.034] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Zaltariov MF, Cojocaru C, Shova S, Sacarescu L, Cazacu M. Synthesis, structural characterization and quantum chemical studies of silicon-containing benzoic acid derivatives. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.05.038] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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