Conformations of propargyl alcohol and its interaction with acetylene: A matrix isolation infrared and DFT computations

Hydrogen Delocalization in an Asymmetric Biomolecule: The Curious Case of Alpha-Fenchol

Rotational microwave jet spectroscopy studies of the monoterpenol α-fenchol have so far failed to identify its second most stable torsional conformer, despite computational predictions that it is only very slightly higher in energy than the global minimum. Vibrational FTIR and Raman jet spectroscopy investigations reveal unusually complex OH and OD stretching spectra compared to other alcohols. Via modeling of the torsional states, observed spectral splittings are explained by delocalization of the hydroxy hydrogen atom through quantum tunneling between the two non-equivalent but accidentally near-degenerate conformers separated by a low and narrow barrier. The energy differences between the torsional states are determined to be only 16(1) and 7(1) cm-1hc for the protiated and deuterated alcohol, respectively, which further shrink to 9(1) and 3(1) cm-1hc upon OH or OD stretch excitation. Comparisons are made with the more strongly asymmetric monoterpenols borneol and isopinocampheol as well as with the symmetric, rapidly tunneling propargyl alcohol. In addition, the third-in contrast localized-torsional conformer and the most stable dimer are assigned for α-fenchol, as well as the two most stable dimers for propargyl alcohol.

Predicting OH stretching fundamental wavenumbers of alcohols for conformational assignment: different correction patterns for density functional and wave-function-based methods

A model is presented for the prediction of OH stretching fundamental wavenumbers of alcohol conformers in the gas phase by application of a small set of empirical anharmonicity corrections to calculations in the harmonic approximation. In contrast to the popular application of a uniform scaling factor, the local chemical structure of the alcohol is taken into account to greatly improve accuracy. Interestingly, different correction patterns emerge for results of hybrid density functional (B3LYP-D3 and PBE0-D3) and wave-function-based methods (SCS-LMP2, LCCSD(T*)-F12a and CCSD(T)-F12a 1D). This raises questions about electronic structure deficiencies in these methods and differences in anharmonicity between alcohols. After its initial construction on the basis of literature assignments the model is tested with Raman jet spectroscopy of propargyl alcohol, cyclohexanol, borneol, isopinocampheol and 2-methylbutan-2-ol. For propargyl alcohol a spectral splitting attributed to tunneling is resolved. PBE0-D3 is identified as a well performing and broadly affordable electronic structure method for this model. A mean absolute error of 1.3 cm-1 and a maximum absolute error of 3 cm-1 result for 46 conformers of 24 alcohols in a 60 cm-1 range, when a single parameter is adjusted separately for each alcohol substitution class (methanol, primary, secondary, tertiary).

Conformations of diethyl ether and its interaction with pyrrole at low temperatures

Conformations of diethyl ether (DEE) were studied at low temperatures in N₂ and Ar matrixes. Computations performed at B3LYP/aug-cc-pVDZ level of theory yielded three minima corresponding to tt, tg^± and g^±g^± conformers of DEE. Of the three, the tt and tg^± conformers of DEE were experimentally identified in N₂ and Ar matrixes. Furthermore, hydrogen bonded complexes of pyrrole (py) with DEE have been investigated using Density Functional Theory (DFT) and matrix isolation infrared spectroscopy. Computations performed at B3LYP level of theory using aug-cc-pVDZ basis set on pyrrole with tt and tg^± conformers of DEE gave py-DEE-tt and py-DEE-tg^± complexes, both characterized by NH⋯O interaction. Experimental evidence for the formation of py-DEE-tt and py-DEE-tg^± complexes was affirmed from the shifts in the NH stretching, NH bending regions of pyrrole and COC and CH stretching regions of DEE. NBO analysis was carried out to understand the charge-transfer delocalization interactions in the conformers of DEE and its hydrogen bonded complexes.

Accessing different binding sites of a multifunctional molecule: IR spectroscopy of propargyl alcohol⋯water complexes in helium droplets

Helium droplets facilitate the formation of two distinct local minimum structures for 1 : 1 propargyl alcohol⋯water complex.

From the propargyl alcohol–water complex to the propargyl alcohol dimer: where does the propargyl alcohol–methanol complex fit in?

A correlation was recognized between the structures of PA–H₂O, PA–MeOH and PA dimer complexes that could help predict the structures of larger systems in a systematic way.

A helium nanodroplet setup for mid and far-infrared spectroscopy using pulsed-free-electron lasers: vibrational spectra of propargyl alcohol

Helium nanodroplets spectroscopy in combination with free electron laser. The combination is suitable for studying molecular clusters in 66–3600 cm⁻¹ spectral range, covering the important low-frequency large amplitude intra and inter-molecular motions.