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Gültekin E, Bekircan O, Kara Y, Güler Hİ, Soylu MS, Kolaylı S. 1,3,4-Thiadiazole and 1,2,4-triazole-5-thione derivatives bearing 2-pentyl-5-phenyl-2,4-dihydro-3H-1,2,4-triazole-3-one ring: Synthesis, molecular docking, urease inhibition, and crystal structure. Arch Pharm (Weinheim) 2023; 356:e2200355. [PMID: 36316247 DOI: 10.1002/ardp.202200355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 10/06/2022] [Accepted: 10/07/2022] [Indexed: 01/03/2023]
Abstract
Two series of 1,3,4-thiadiazole (40a-o) and 1,2,4-triazole-5-thione (41a-l) derivatives bearing a 2-pentyl-5-phenyl-1,2,4-triazole-3-one ring were synthesized and then studied for their urease inhibitory activities using thiourea as a standard drug. Among the two groups, the first group (40a-o) did not show good activity while the second group (41a-l) showed excellent activity. Compound 41j (1091.24 ± 14.02 µM) of the second series of compounds showed lower activity than thiourea, while the remaining 11 compounds (41a-i, k, and l) showed better activity than thiourea (183.92 ± 13.14 µM). Among the 11 compounds, 41b (15.96 ± 2.28 µM) having the 3-F group on the phenyl ring showed the highest inhibitory activity. Urease kinetic studies of 41b, which is the most active compound, determined it to have an un-competitive inhibition potential. Moreover, in silico analysis against urease from jack bean with 27 new heterocyclic compounds and the reference molecule was carried out to see the necessary interactions responsible for urease activity. The docking calculations of all compounds supported stronger binding to the receptor than the reference molecule, with high inhibition constants. In addition, compound 40m was characterized by single-crystal X-ray diffraction analysis. X-ray analysis reveals that the structures of the compound 40m crystallize in the monoclinic P21/c space group with the cell parameters: a = 10.2155(9) Å, b = 22.1709(18) Å, c = 21.4858(17) Å, β = 99.677(8)°, V = 4797.0(7) Å3 . X-ray diffraction analyses were also performed to gain insights into the role of weak intermolecular interactions and C-H…X (halogen) interactions in compound 40m that influence the crystal packing.
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Affiliation(s)
- Ergün Gültekin
- Science Technology Research and Application Center, Artvin Coruh University, Artvin, Turkey
| | - Olcay Bekircan
- Department of Chemistry, Faculty of Science, Karadeniz Technical University, Trabzon, Turkey
| | - Yakup Kara
- Department of Chemistry, Faculty of Science, Karadeniz Technical University, Trabzon, Turkey
| | - Halil İbrahim Güler
- Department of Molecular Biology and Genetics, Faculty of Science, Karadeniz Technical University, Trabzon, Turkey
| | - Mustafa Serkan Soylu
- Department of Physics, Art and Science Faculty, Giresun University, Giresun, Turkey
| | - Sevgi Kolaylı
- Department of Chemistry, Faculty of Science, Karadeniz Technical University, Trabzon, Turkey
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Garg U, Azim Y. Experimental and computational analyses of the cocrystal of Tetrahydrofuran-2,3,4,5-tetracarboxylic acid and urea. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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Kodasi B, Joshi SD, Kamble RR, Keri RS, Bayannavar PK, Nesaragi AR, Dixit S, Vootla SK, Metre TV. Cu microcrystals garnished with copper nanoparticles catalyzed one‐pot facile synthesis of novel 1,2,3‐triazoles via click chemistry as antifungal agents. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Barnabas Kodasi
- Department of Studies in Chemistry Karnatak University Dharwad India
| | - Shrinivas D. Joshi
- Novel Drug Design and Discovery Laboratory, Department of Pharmaceutical Chemistry S.E.T.'s College of Pharmacy Dharwad India
| | | | - Rangappa S. Keri
- Centre for Nano and Material Science Jain University Bangalore India
| | | | | | - Shruti Dixit
- Department of Biotechnology Karnatak University Dharwad India
| | | | - Tukaram V. Metre
- Department of Studies in Chemistry Karnatak University Dharwad India
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Bayannavar PK, Kamble RR, Joshi SD, Nesaragi AR, Shaikh SKJ, Sudha BS, Dodamani SS, Hoolageri SR. Design and Synthesis of Angiotensin Converting Enzyme (ACE) Inhibitors: Analysis of the Role of Tetrazole Ring Appended to Biphenyl Moiety. ChemistrySelect 2022. [DOI: 10.1002/slct.202103336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Praveen K. Bayannavar
- Department of Studies in Chemistry Karnatak University Pavate Nagar Dharwad 580003 Karnataka India
| | - Ravindra R. Kamble
- Department of Studies in Chemistry Karnatak University Pavate Nagar Dharwad 580003 Karnataka India
| | - Shrinivas D. Joshi
- Novel Drug Design and Discovery Laboratory Department of Pharmaceutical Chemistry S.E.T.'s College of Pharmacy, Sangolli Rayanna Nagar Dharwad 580002 Karnataka India
| | - Aravind R. Nesaragi
- Department of Studies in Chemistry Karnatak University Pavate Nagar Dharwad 580003 Karnataka India
| | - Saba Kauser J. Shaikh
- Department of Studies in Chemistry Karnatak University Pavate Nagar Dharwad 580003 Karnataka India
| | - Belgur S. Sudha
- Department of Chemistry Yuvaraja's College University of Mysore, Mysore 570 005 Karnataka India
| | - Suneel S. Dodamani
- Dr. Prabhakar Kore Basic Science Research Centre KLE University, Nehru Nagar Belagavi 590010 Karnataka India
| | - Swati R. Hoolageri
- Department of Studies in Chemistry Karnatak University Pavate Nagar Dharwad 580003 Karnataka India
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Marganakop SB, Kamble RR, Sannaikar MS, Bayannavar PK, Kumar SM, Inamdar SR, Shirahatti AM, Desai SM, Joshi SD. SCXRD, DFT and molecular docking based structural analyses towards novel 3-piperazin-1-yl-benzo[d]isothiazole and 3-piperidin-4-yl-benzo[d]isoxazoles appended to quinoline as pharmacological agents. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Synthesis of metal free organic dyes: Experimental and theoretical approach to sensitize one-dimensional cadmium sulphide nanowires for solar cell application. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.116862] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Sehout I, Boulebd H, Boulcina R, Nemouchi S, Bendjeddou L, Bramki A, Merazig H, Debache A. Synthesis, crystal structure, Hirshfeld surface analysis, biological evaluation, DFT calculations, and in silico ADME analysis of 4-arylidene pyrazolone derivatives as promising antibacterial agents. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129586] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Shashi R, Begum NS, Panday AK. A Rapid Ultrasound Synthesis of Xanthenediones Catalyzed by Boric acid in Ethanol-Water Medium: Single Crystal, DFT and Hirshfeld Surface Analysis of Two Representative Compounds. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129794] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Abidi SSA, Garg U, Azim Y, Alam M, Gupta AK, Pradeep CP, Azum N, Asiri AM. Spectroscopic, Structural, DFT and Molecular Docking Studies on Novel Cocrystal Salt Hydrate of Chromotropic Acid and Its Antibiofilm Activity. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2020. [DOI: 10.1007/s13369-020-04822-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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