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Bakhite E, Mohamed SK, Lai CH, Subramani K, Marae IS, Abuelhassan S, Soliman AAE, Youssef MSK, Abuelizz HA, Mague JT, Al-Salahi R, El Bakri Y. Synthesis, Crystal Structure, Hirshfeld Surface Analysis, and Computational Approach of a New Pyrazolo[3,4- g]isoquinoline Derivative as Potent against Leucine-Rich Repeat Kinase 2 (LRRK2). ACS OMEGA 2024; 9:30751-30770. [PMID: 39035914 PMCID: PMC11256088 DOI: 10.1021/acsomega.4c03208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Revised: 06/22/2024] [Accepted: 06/25/2024] [Indexed: 07/23/2024]
Abstract
Ethyl-2-((8-cyano-3,5,9a-trimethyl-1-(4-oxo-4,5-dihydrothiazol-2-yl)-4-phenyl-3a,4,9,9a-tetrahydro-1H-pyrazolo[3,4-g]isoquinolin-7-yl)thio)acetate (5) was synthesized, and its structure was characterized by IR, MS, and NMR (1H and 13C) and verified by a single-crystal X-ray structure determination. Compound 5 adopts a "pincer" conformation. In the crystal, the hydrogen bonds of -H···O, C-H···O, and O-H···S form thick layers of molecules that are parallel to (101). The layers are linked by C-H···π(ring) interactions. The Hirshfeld surface analysis shows that intermolecular hydrogen bonding plays a more important role than both intramolecular hydrogen bonding and π···π stacking in the crystal. The intramolecular noncovalent interactions in 5 were studied by QTAIM, NCI, and DFT-NBO calculations. Based on structural activity relationship studies, leucine-rich repeat kinase 2 (LRRK2) was found to bind 5 and was further subjected to molecular docking studies, molecular dynamics, and ADMET analysis to probe potential drug candidacy.
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Affiliation(s)
- Etify
A. Bakhite
- Department
of Chemistry, Faculty of Science, Assiut
University, Assiut 71516, Egypt
| | - Shaaban Kamel Mohamed
- Chemistry
and Environmental Division, Manchester Metropolitan
University, Manchester M1 5GD, England
- Chemistry
Department, Faculty of Science, Minia University, El-Minia 61519, Egypt
| | - Chin-Hung Lai
- Department
of Medical Applied Chemistry, Chung Shan
Medical University, Taichung 40241, Taiwan
- Department
of Medical Education, Chung Shan Medical
University Hospital, Taichung 40201, Taiwan
| | - Karthikeyan Subramani
- Center
for
Healthcare Advancement, Innovation and Research, Vellore Institute of Technology University, Chennai Campus, Chennai 600127, India
| | - Islam S. Marae
- Department
of Chemistry, Faculty of Science, Assiut
University, Assiut 71516, Egypt
| | - Suzan Abuelhassan
- Department
of Chemistry, Faculty of Science, Assiut
University, Assiut 71516, Egypt
| | | | | | - Hatem A. Abuelizz
- Department
of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia
| | - Joel T. Mague
- Department
of Chemistry, Tulane University, New Orleans, Louisiana 70118, United States
| | - Rashad Al-Salahi
- Department
of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia
| | - Youness El Bakri
- Department
of Theoretical and Applied Chemistry, South
Ural State University, Lenin prospect 76, Chelyabinsk 454080, Russian Federation
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Garadi WA, Bakri YE, Lai CH, Anouar EH, Ghayati LE, Mague JT, Essassi EM. Synthesis, X-ray, spectroscopic characterization, Hirshfeld surface analysis, DFT calculation and molecular docking investigations of a novel 7-phenyl-2,3,4,5-tetrahydro-1H-1,4- diazepin-5-one derivative. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130146] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Efficient synthesis of (5-oxo-6,7-dihydro-4H-[1,2,4]triazolo-[1,5-a]pyrimidin-6-yl)acetanilides based on the recyclization of N-arylitaconimides with 3-amino[1,2,4]triazoles. Russ Chem Bull 2021. [DOI: 10.1007/s11172-021-3118-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Pogaku V, Krishnan R, Basavoju S. Synthesis and biological evaluation of new benzo[d][1,2,3]triazol-1-yl-pyrazole-based dihydro-[1,2,4]triazolo[4,3-a]pyrimidines as potent antidiabetic, anticancer and antioxidant agents. RESEARCH ON CHEMICAL INTERMEDIATES 2020. [DOI: 10.1007/s11164-020-04285-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Garadi WA, Bakri YE, Lai C, Karthikeyan S, Ghayati LE, Mague JT, Essassi EM. Synthesis, Crystal Structure and Computational Investigation of New 4‐Phenyl‐decahydro‐1 H‐1,5‐benzodiazepin‐2‐one as Potent Inhibitor of Mu‐opioid Receptor. ChemistrySelect 2020. [DOI: 10.1002/slct.202000356] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Wedad Al Garadi
- Laboratoire de Chimie Organique HétérocycliqueCentre de Recherche des Sciences des MédicamentsPôle de Compétences PharmacochimieURAC 21Faculté des SciencesUniversité Mohammed V Rabat Avenue Ibn Battouta, BP 1014 Rabat Morocco
| | - Youness El Bakri
- Laboratoire de Chimie Organique HétérocycliqueCentre de Recherche des Sciences des MédicamentsPôle de Compétences PharmacochimieURAC 21Faculté des SciencesUniversité Mohammed V Rabat Avenue Ibn Battouta, BP 1014 Rabat Morocco
- South Ural State University Lenin prospect 76 Chelyabinsk 454080 Russian Federation
| | - Chin‐Hung Lai
- Department of Medical Applied ChemistryChung Shan Medical University Taichung 40241 Taiwan
- Department of Medical EducationChung Shan Medical University Hospital 402 Taichung Taiwan
| | - Subramani Karthikeyan
- Organic Chemistry DepartmentScience FacultyRUDN University Miklukho-Maklayast. 6 117198 Moscow Russian Federation
| | - Lhoussaine El Ghayati
- Laboratoire de Chimie Organique HétérocycliqueCentre de Recherche des Sciences des MédicamentsPôle de Compétences PharmacochimieURAC 21Faculté des SciencesUniversité Mohammed V Rabat Avenue Ibn Battouta, BP 1014 Rabat Morocco
| | - Joel T. Mague
- Department of ChemistryTulane University New Orleans LA 70118 USA
| | - El Mokhtar Essassi
- Laboratoire de Chimie Organique HétérocycliqueCentre de Recherche des Sciences des MédicamentsPôle de Compétences PharmacochimieURAC 21Faculté des SciencesUniversité Mohammed V Rabat Avenue Ibn Battouta, BP 1014 Rabat Morocco
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Yuan F, Li Y, Yuan CM, Liu YL, Zhou CS, Chen FY, Cao BY, Li ZJ, Li KB, Yu HS. Effect of pH on the construction of zinc coordination polymers based on carboxylate functionalized triazole derivative ligand. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.126905] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Pogaku V, Gangarapu K, Basavoju S, Tatapudi KK, Katragadda SB. Design, synthesis, molecular modelling, ADME prediction and anti-hyperglycemic evaluation of new pyrazole-triazolopyrimidine hybrids as potent α-glucosidase inhibitors. Bioorg Chem 2019; 93:103307. [DOI: 10.1016/j.bioorg.2019.103307] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2019] [Revised: 09/13/2019] [Accepted: 09/19/2019] [Indexed: 12/14/2022]
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Jabli D, Milad R, Abderrabba M, Efrit ML. Synthesis, Antibacterial Activity and DFT Calculation of Naphtopyrano, Furo and Pyrazolo [3,2,e] [1,2,4]Triazolo-[1,5-c]Pyrimidine Derivatives. CHEMISTRY AFRICA-A JOURNAL OF THE TUNISIAN CHEMICAL SOCIETY 2019. [DOI: 10.1007/s42250-019-00081-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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