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Menon P, Kunjumon J, Jose AK, Aleena P, Bansal M, Vinitha G, Maity T, Abraham PM, Sajan D, George SD. Structural, Third Order Nonlinear and Magnetic Properties of Pristine and Ni-doped CuO nanoparticles: Diluted Magnetic Semiconductors. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.129582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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2
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Thangarasu S, Chitradevi A, Siva V, Shameem A, Murugan A, Viswanathan TM, Athimoolam S, Bahadur SA. Structural, Spectroscopic, Cytotoxicity and Molecular Docking Studies of Charge Transfer Salt: 4-Aminiumantipyrine Salicylate. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2022.2064883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- S. Thangarasu
- Department of Physics, School of Advanced Sciences, Kalasalingam Academy of Research and Education, Krishnankoil, India
- Condensed Matter Physics Laboratory, International Research Centre, Kalasalingam Academy of Research and Education, Krishnankoil, India
| | - A. Chitradevi
- Department of Physics, Sri Subramanya College of Engineering and Technology, Palani, India
| | - V. Siva
- Department of Physics, Karpagam Academy of Higher Education, Coimbatore, India
| | - A. Shameem
- Department of Physics, School of Advanced Sciences, Kalasalingam Academy of Research and Education, Krishnankoil, India
- Condensed Matter Physics Laboratory, International Research Centre, Kalasalingam Academy of Research and Education, Krishnankoil, India
| | - A. Murugan
- Department of Physics, School of Advanced Sciences, Kalasalingam Academy of Research and Education, Krishnankoil, India
- Condensed Matter Physics Laboratory, International Research Centre, Kalasalingam Academy of Research and Education, Krishnankoil, India
| | - T. M. Viswanathan
- Department of Biotechnology, School of Bio and Chemical Engineering, Kalasalingam Academy of Research and Education, Krishnankoil, India
| | - S. Athimoolam
- Department of Physics, University College of Engineering Nagercoil, Anna University, Nagercoil, India
| | - S. Asath Bahadur
- Department of Physics, School of Advanced Sciences, Kalasalingam Academy of Research and Education, Krishnankoil, India
- Condensed Matter Physics Laboratory, International Research Centre, Kalasalingam Academy of Research and Education, Krishnankoil, India
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Öztürkkan FE, Özdemir M, Akbaba GB, Sertçelik M, Yalçın B, Necefoğlu H, Hökelek T. Synthesis, crystal structure, potential drug properties for Coronavirus of Co(II) and Zn(II) 2-chlorobenzoate with 3-cyanopyridine complexes. J Mol Struct 2022; 1250:131825. [PMID: 34744184 PMCID: PMC8556650 DOI: 10.1016/j.molstruc.2021.131825] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Revised: 10/24/2021] [Accepted: 10/26/2021] [Indexed: 01/18/2023]
Abstract
Two new complexes of Co(II) and Zn(II) 2-chlorobenzoate (2-ClBA) with 3-cyanopyridine (CNP) of the general formula [Co(2-ClBA)2(CNP)2(H2O)2] and [Zn(2-ClBA)2(CNP)2(H2O)2] were synthesized. The structures of the complexes were characterized by single crystal XRD and FT-IR and NMR spectroscopy and Mass Spectrometry (MALDI-TOF MS) methods. Mononuclear complexes exhibit octahedral coordination. In addition, Hirshfeld surface analysis was performed to determine non-covalent interactions in crystal packing. The geometry optimization of the molecules was carried out using the LANL2DZ level of theory of the DFT method and the obtained findings were confirmed by comparing with the data obtained from the single crystal X-ray diffraction method. The theoretical and experimental bond angles and lengths are very close to each other. The effectiveness of the complexes against SARS-CoV-2 enzymes was investigated in silico using the molecular docking method, and a binding score of -8.0 kcal/mol on NSP16 of complex 1 as an inhibitor was obtained. To investigate the drug potential of the complexes, their pharmacokinetic and toxicokinetic properties were estimated by ADMET calculations.
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Affiliation(s)
| | - Mücahit Özdemir
- Department of Chemistry, Marmara University, İstanbul, Turkey
| | | | | | - Bahattin Yalçın
- Department of Chemistry, Marmara University, İstanbul, Turkey
| | | | - Tuncer Hökelek
- Department of Physics, Hacettepe University, Ankara, Turkey
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Siva V, Chitra Devi A, Thangarasu S, Viswanathan T, Athimoolam S, Bahadur SA. Design, structural, DFT, molecular docking studies and biological evaluation of 4-aminiumantipyrine dihydrogenphosphate monohydrate. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131866] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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5
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Siva V, Murugan A, Shameem AS, Priya MU, Thangarasu S, Athimoolam S, Bahadur SA. Design and supramolecular architecture of stepped molecular aggregation in monochloroacetate salt of 2-aminopyridine: Its bacterial and cancer inhibitory properties. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131888] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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6
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Crystal structure, High-resolution X-ray diffraction and Hirshfeld surface analysis of a novel third-order nonlinear optical crystal: Diisopropylammonium oxalate. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.131177] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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7
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Synthesis, structural, spectroscopic, mechanical, linear and nonlinear optical studies on 4-dimethylaminopyridinium p-toluenesulfonate: A comparative theoretical and experimental investigation. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130530] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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8
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Anandaraj L, Jothi L. Effect of shock waves on enhancing the optical properties of Ammonium Pentaborate Hexahydrate single crystal molecular structure. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130068] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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9
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Kang H, Ye J, Wang H, Zhang Y, Qiu Y. DFT study of effect of substituents on second-order NLO response of novel BODIPY dyes. Theor Chem Acc 2021. [DOI: 10.1007/s00214-021-02758-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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10
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Development of new L- Serine Squarate single crystal: Growth, structure, Hirshfeld surface analysis with enrichment ratio of atomic contacts. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129190] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Structural elucidation, hydrogen bonding motifs and solid state properties of p-toluenesulfonate salt of β-alaninine for optoelectronic device application. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128820] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Msalmi R, Elleuch S, Hamdi B, Zouari R, Naїli H. Synthesis, DFT calculations, intermolecular interactions and third order nonlinear optical properties of new organoammonium tetrabromocadmate (II): (C5H6N2Cl)2[CdBr4]·H2O. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128853] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Chetry S, Sharma P, Frontera A, Dutta D, Verma AK, Bhattacharyya MK. Unconventional formation of a 1D-chain of H-bonded water molecules in bipyridine-based supramolecular hexameric hosts of isostructural coordination compounds of Co(II) and Zn(II): Antiproliferative evaluation and theoretical studies. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114809] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Comment on “Synthesis, structural, vibrational, thermal, dielectric and optical properties of third order nonlinear optical single crystal for optical power limiting applications” by V. Siva et al. [J. Mol. Struct. 1191 (2019) 110–117]. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Mishra VR, Ghanavatkar CW, Sharma S, Premarani A, Mathew E, Joe IH, Sekar N. Linear and NLO Properties of Functional Group and Position Isomers of Azo and Azomethine: Comparative Photophysical‐Electrochemical Properties, Z‐Scan and DFT Studies. ChemistrySelect 2020. [DOI: 10.1002/slct.202001072] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Virendra R. Mishra
- Department of Dyestuff Technology Institute of Chemical Technology,Matunga Mumbai India
| | | | - Suryapratap Sharma
- Department of Dyestuff Technology Institute of Chemical Technology,Matunga Mumbai India
- Centre for Molecular and Biophysics Research Department of Physics Mar Ivanios College Thiruananthapuram Kerala 695015 India
| | - Aswathy Premarani
- Centre for Molecular and Biophysics Research Department of Physics Mar Ivanios College Thiruananthapuram Kerala 695015 India
| | - Elizabeth Mathew
- Centre for Molecular and Biophysics Research Department of Physics Mar Ivanios College Thiruananthapuram Kerala 695015 India
| | - Isaac H. Joe
- Centre for Molecular and Biophysics Research Department of Physics Mar Ivanios College Thiruananthapuram Kerala 695015 India
| | - Nagaiyan Sekar
- Department of Dyestuff Technology Institute of Chemical Technology,Matunga Mumbai India
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Siva V, Shameem A, Murugan A, Athimoolam S, Suresh M, Bahadur SA. Investigation on structural, optical, dielectric, mechanical and thermal properties of 4-methoxyaniline hydroquinone cocrystal: A promising optical power limiting material. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127619] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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17
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Synthesis, crystal structure, spectroscopic investigations, physicochemical properties of third-order NLO single crystal for optical applications. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127400] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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18
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Siva V, Suresh M, Athimoolam S, Asath Bahadur S. Crystal structure and Hirshfeld surface analysis of 2-amino-pyridinium hydrogen phthalate. Acta Crystallogr E Crystallogr Commun 2019; 75:1627-1631. [PMID: 31709080 PMCID: PMC6829739 DOI: 10.1107/s2056989019012957] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Accepted: 09/19/2019] [Indexed: 12/01/2022]
Abstract
Amino-pyridine and phthalic acid are well known synthons for supra-molecular architectures for the synthesis of new materials for optical applications. The 2-amino-pyridinium hydrogen phthalate title salt, C5H7N2 +·C8H5O4 -, crystallizes in the non-centrosymmetric space group P21. The nitro-gen atom of the -NH2 group in the cation deviates from the fitted pyridine plane by 0.035 (7) Å. The plane of the pyridinium ring and phenyl ring of the anion are oriented at an angle of 80.5 (3)° to each other in the asymmetric unit. The anion features a strong intra-molecular O-H⋯O hydrogen bond, forming a self-associated S(7) ring motif. The crystal packing is dominated by inter-molecular N-H⋯O hydrogen bonds leading to the formation of 21 helices, with a C(11) chain motif. They propagate along the b axis and enclose R 2 2(8) ring motifs. The helices are linked by C-H⋯O hydrogen bonds, forming layers parallel to the ab plane. Hirshfeld surface analysis and two-dimensional fingerprint plots were used to investigate and qu-antify the inter-molecular inter-actions in the crystal.
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Affiliation(s)
- V. Siva
- Department of Physics, School of Advanced Sciences, Kalasalingam Academy of Research and Education, Krishnankoil - 626 126, India
- Condensed Matter Physics Laboratory, International Research Centre, Kalasalingam Academy of Research and Education, Krishnankoil - 626 126, India
| | - M. Suresh
- Department of Physics, Er. Perumal Manimekalai College of Engineering, Hosur 635 117, India
| | - S. Athimoolam
- Department of Physics, University College of Engineering, Anna University, Nagercoil 629 004, India
| | - S. Asath Bahadur
- Department of Physics, School of Advanced Sciences, Kalasalingam Academy of Research and Education, Krishnankoil - 626 126, India
- Condensed Matter Physics Laboratory, International Research Centre, Kalasalingam Academy of Research and Education, Krishnankoil - 626 126, India
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