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Alshammari MB, Aly AA, Ahmad A, Brown AB, Mohamed AH. Recent synthetic strategies of spiro-azetidin-2-one, -pyrrolidine, -indol(one) and -pyran derivatives-a review. RSC Adv 2023; 13:32786-32823. [PMID: 37942448 PMCID: PMC10628897 DOI: 10.1039/d3ra06054c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 10/24/2023] [Indexed: 11/10/2023] Open
Abstract
Spiro-heterocycles have received special attention in medicinal chemistry because of their promising biological activity. Over the years, many synthetic methodologies have been established for the construction of spirocyclic compounds. Spiro heterocycles such as spiro-azetidin-2-one, -pyrrolidine, -indol(one) and -pyran derivatives have been found to exhibit diversified biological and pharmacological activity in addition to their therapeutic properties. In view of these facts, we decided in this review to present representative synthetic approaches of the aforementioned spiro heterocycles, especially in the past 20 years.
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Affiliation(s)
- Mohammed B Alshammari
- Chemistry Department, College of Sciences and Humanities, Prince Sattam Bin Abdulaziz University Al-Kharij Saudi Arabia
| | - Ashraf A Aly
- Chemistry Department, Faculty of Science, Minia University 61519 El-Minia Egypt
| | - Akil Ahmad
- Chemistry Department, College of Sciences and Humanities, Prince Sattam Bin Abdulaziz University Al-Kharij Saudi Arabia
| | - Alan B Brown
- Department of Chemistry and Chemical Engineering, Florida Institute of Technology Melbourne FL 32901 USA
| | - Asmaa H Mohamed
- Chemistry Department, Faculty of Science, Minia University 61519 El-Minia Egypt
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Rajesh Kumar T, Premkumar R, Langeswaran K, Ramavenkateswari K, Anitha S, Sangavi P, Sangeetha R. Virtual screening, molecular docking, molecular dynamics and quantum chemical studies on (2-methoxy-4-prop-2-enylphenyl) N-(2-methoxy-4-nitrophenyl) carbamate: a novel inhibitor of hepatocellular carcinoma. J Biomol Struct Dyn 2023; 41:13595-13604. [PMID: 37010992 DOI: 10.1080/07391102.2023.2192795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 01/29/2023] [Indexed: 04/04/2023]
Abstract
HDAC protein is associated with hepatocellular carcinoma. Different medicinal plants were selected for this study to analyze the inhibitory efficacy against the target protein, HDAC. Using virtual screening, we filtered out the best compounds, and molecular docking (XP) was carried out for the top compounds which filtered out. The molecular docking results showed that the title compound (2-methoxy-4-prop-2-enylphenyl) N-(2-methoxy-4-nitrophenyl) carbamate (MEMNC) has the highest docking score of about -7.7 kcal/mol against the targeted protein histone deacetylase (HDAC) compared with the other selected phytocompounds. From the molecular dynamics analysis, the RMSD and RMSF plots depicted the overall stability of the protein-ligand complex. Toxicity properties show the acceptable range of various kinds of toxicity that were predicted using the ProTox-II server. In addition, DFT quantum chemical and physicochemical properties of the MEMNC molecule were reported. Initially, the molecular structure of the MEMNC molecule was optimized and harmonic vibrational frequencies were calculated using DFT/B3LYP method with a cc-pVTZ basis set using Gaussian 09 program. The calculated vibrational wavenumber values were assigned based on Potential Energy Distribution calculations using the VEDA 4.0 program and correlated well with the previous literature values. The molecule has bioactivity as a result of intramolecular charge transfer interactions, as demonstrated by frontier molecular orbital analysis. Molecular electrostatic potential surface and Mulliken atomic charge distribution analyses validate the reactive sites of the molecule. Thus, the title compound can be used as a potential inhibitor of HDAC protein, which paves the way for designing novel drugs to treat Hepatocellular carcinoma.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- T Rajesh Kumar
- Department of Physics, G.T.N. Arts College, Dindigul, Tamil Nadu, India
| | - R Premkumar
- Department of Physics, N.M.S.S.V.N. College, Nagamalai, Madurai, Tamil Nadu, India
| | - K Langeswaran
- Cancer Informatics Laboratory, Department of Bioinformatics, Alagappa University, Science Campus, Karaikudi, Tamil Nadu, India
| | | | - S Anitha
- Department of Physics, Arulmigu Palaniandavar College of Arts and Science, Palani, Tamil Nadu, India
| | - P Sangavi
- Cancer Informatics Laboratory, Department of Bioinformatics, Alagappa University, Science Campus, Karaikudi, Tamil Nadu, India
| | - R Sangeetha
- Department of Physics, Mannar Thirumalai Naicker College, Pasumalai, Madurai, Tamil Nadu, India
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Kirubhanand C, Merciline Leonora J, Anitha S, Sangeetha R, Nachammai KT, Langeswaran K, Gowtham Kumar S. Targeting potential receptor molecules in non-small cell lung cancer (NSCLC) using in silico approaches. Front Mol Biosci 2023; 10:1124563. [PMID: 36845553 PMCID: PMC9947406 DOI: 10.3389/fmolb.2023.1124563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 01/23/2023] [Indexed: 02/11/2023] Open
Abstract
Introduction: Non-Small Cell Lung Cancer is the most prevalent type of cancer in lung cancer. Chemotherapy, radiation therapy, and other conventional cancer treatments have a low success rate. Thus, creating new medications is essential to halt the spread of lung cancer. Methods: In this study bioactive nature of lochnericine against Non-Small Cell Lung Cancer (NSCLC) was analyzed using various computational approaches such as quantum chemical calculations, molecular docking, and molecular dynamic simulation. Furthermore, the MTT assay shows the anti-proliferation activity of lochnericine. Results and Discussion: Using Frontier Molecular Orbital (FMO), the calculated band gap energy value associated with bioactive compounds and the molecule's potential bioactivity is confirmed. The H38 hydrogen atom and O1 oxygen atom in the molecule are effectively electrophilic, and potential nucleophilic attack sites were confirmed through analysis of the Molecular electrostatic potential surface. Furthermore, the electrons within the molecule were delocalized, which confers bioactivity on the title molecule and was authorized through Mulliken atomic charge distribution analysis. A molecular docking study revealed that lochnericine inhibits non-small cell lung cancer-associated targeted protein. The lead molecule and targeted protein complex were stable during molecular dynamics simulation studies till the simulation period. Further, lochnericine demonstrated remarkable anti-proliferative and apoptotic features against A549 lung cancer cells. The current investigation powerfully suggests that lochnericine is a potential candidate for lung cancer.
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Affiliation(s)
- C. Kirubhanand
- Department of Anatomy, All India Institute of Medical Sciences, Nagpur, Maharashtra, India
| | - J. Merciline Leonora
- PG and Research Department of Physics, Government Arts College, Madurai, Tamil Nadu, India
| | - S. Anitha
- Department of Physics, ArulmiguPalaniandavar College of Arts and Science, Palani, Tamil Nadu, India
| | - R. Sangeetha
- Department of Physics, Mannar Thirumalai Naicker College, Madurai, Tamil Nadu, India
| | - K. T. Nachammai
- Department of Biotechnology, Science Campus, Alagappa University, Karaikudi, Tamil Nadu, India
| | - K. Langeswaran
- Department of Biotechnology, Science Campus, Alagappa University, Karaikudi, Tamil Nadu, India,*Correspondence: S. Gowtham Kumar, ; K. Langeswaran,
| | - S. Gowtham Kumar
- Faculty of Allied Health Sciences, Chettinad Hospital & Research Institute, Chettinad Academy of Research and Education, Kelambakkam, Tamil Nadu, India,*Correspondence: S. Gowtham Kumar, ; K. Langeswaran,
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J. AHM, R. P, R. S, A. L, K. L. Structural, Quantum Chemical, Molecular Docking, and Dynamics Studies of Quercetin—A Potent Inhibitor for Colon Cancer. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2022.2149574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Affiliation(s)
| | - Premkumar R.
- PG and Research Department of Physics, N.M.S.S.V.N. College, Madurai, India
| | - Sangeetha R.
- Department of Physics, Mannar Thirumalai Naicker College, Madurai, India
| | - Lakshmi A.
- Department of Physics, Mannar Thirumalai Naicker College, Madurai, India
| | - Langeswaran K.
- Department of Biotechnology, Alagappa University, Science Campus, Karaikudi, India
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Multifunctional Derivatives of Spiropyrrolidine Tethered Indeno-Quinoxaline Heterocyclic Hybrids as Potent Antimicrobial, Antioxidant and Antidiabetic Agents: Design, Synthesis, In Vitro and In Silico Approaches. Molecules 2022; 27:molecules27217248. [PMID: 36364077 PMCID: PMC9653804 DOI: 10.3390/molecules27217248] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 10/12/2022] [Accepted: 10/17/2022] [Indexed: 12/04/2022] Open
Abstract
To combat emerging antimicrobial-resistant microbes, there is an urgent need to develop new antimicrobials with better therapeutic profiles. For this, a series of 13 new spiropyrrolidine derivatives were designed, synthesized, characterized and evaluated for their in vitro antimicrobial, antioxidant and antidiabetic potential. Antimicrobial results revealed that the designed compounds displayed good activity against clinical isolated strains, with 5d being the most potent (MIC 3.95 mM against Staphylococcus aureus ATCC 25923) compared to tetracycline (MIC 576.01 mM). The antioxidant activity was assessed by trapping DPPH, ABTS and FRAP assays. The results suggest remarkable antioxidant potential of all synthesized compounds, particularly 5c, exhibiting the strongest activity with IC50 of 3.26 ± 0.32 mM (DPPH), 7.03 ± 0.07 mM (ABTS) and 3.69 ± 0.72 mM (FRAP). Tested for their α-amylase inhibitory effect, the examined analogues display a variable degree of α-amylase activity with IC50 ranging between 0.55 ± 0.38 mM and 2.19 ± 0.23 mM compared to acarbose (IC50 1.19 ± 0.02 mM), with the most active compounds being 5d, followed by 5c and 5j, affording IC50 of 0.55 ± 0.38 mM, 0.92 ± 0.10 mM, and 0.95 ± 0.14 mM, respectively. Preliminary structure–activity relationships revealed the importance of such substituents in enhancing the activity. Furthermore, the ADME screening test was applied to optimize the physicochemical properties and determine their drug-like characteristics. Binding interactions and stability between ligands and active residues of the investigated enzymes were confirmed through molecular docking and dynamic simulation study. These findings provided guidance for further developing leading new spiropyrrolidine scaffolds with improved dual antimicrobial and antidiabetic activities.
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Ganesh M, Suraj S. Expeditious entry into carbocyclic and heterocyclic spirooxindoles. Org Biomol Chem 2022; 20:5651-5693. [PMID: 35792116 DOI: 10.1039/d2ob00767c] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Spirocyclic frameworks have attracted synthetic practitioners due to their unique three-dimensional assembly, improved metabolic stability, solubility, and increased molecular complexity with regard to planar architectures. A recent surge in the number of spirocyclic oxindoles inhibiting enzymes, moderating unique protein-protein interactions, modulating receptors and transporters is testament to their prevalence. Against this background, the construction of spirocyclic frameworks containing an oxindole moiety as a torsional switch via stereoselective methods is in great demand. Herein we present a summary of the past three years in the progress of metal, organic molecule, nanostructured particle mediated, and even uncatalyzed versions of the highly diastereo- and enantioselective pathways leading to oxindole spirocycles.
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Affiliation(s)
- Madhu Ganesh
- Sudhanva Technologies Private Limited, No. 7, Weavers Colony, Basavanapura, Bengaluru, Karnataka 560083, India.
| | - Shammy Suraj
- Department of Chemistry, Indian Institute of Technology, Powai, Mumbai, Maharashtra 400076, India
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Sangeetha R, Premkumar R, Maithili SS, Kirubhanand C, Gowtham Kumar S, Sangavi P, Langeswaran K. Spectroscopic, Solvent Effect, Molecular Docking and Molecular Dynamics Investigations on Phytocompounds from Elettaria cardamomum against Covid-19. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2022.2086270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- R. Sangeetha
- Department of Physics, Mannar Thirumalai Naicker College, Madurai, Tamil Nadu, India
| | - R. Premkumar
- PG and Research Department of Physics, N.M.S.S.V.N. College, Madurai, Tamil Nadu, India
| | | | - C. Kirubhanand
- Department of Anatomy, All India Institute of Medical Sciences, Nagpur, Maharashtra, India
| | - S. Gowtham Kumar
- Faculty of Allied Health Sciences, Chettinad Hospital & Research Institute, Chettinad Academy of Research and Education (Deemed to Be University), Kelambakkam, Tamil Nadu, India
| | - P. Sangavi
- Cancer Informatics Laboratory, Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India
| | - K. Langeswaran
- Cancer Informatics Laboratory, Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India
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Asad M, Arshad MN, Asiri AM, Khan SA, Rehan M, Oves M. Synthesis, Characterization, Molecular Docking and Antimicrobial Activity of Novel Spiropyrrolidine Derivatives. Polycycl Aromat Compd 2021. [DOI: 10.1080/10406638.2021.1936083] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Mohammad Asad
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Muhammad Nadeem Arshad
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Center of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University, Jeddah, Saudi Arabia
| | - Abdullah M. Asiri
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Center of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University, Jeddah, Saudi Arabia
| | - Salman A. Khan
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Physical Sciences Section, School of Sciences, Maulana Azad National Urdu University, Hyderabad, Telangana, India
| | - Mohd Rehan
- King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia
- Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Mohammad Oves
- Center of Excellence in Environmental Studies, King Abdul-Aziz University, Jeddah, Saudi Arabia
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