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Selvaganesan K, Ha Y, Sun H, Zhang Z, Sun C, Samardzija A, Galiana G, Constable RT. Encoding scheme design for gradient-free, nonlinear projection imaging using Bloch-Siegert RF spatial encoding in a low-field, open MRI system. Sci Rep 2024; 14:3307. [PMID: 38332252 PMCID: PMC10853509 DOI: 10.1038/s41598-024-53703-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Accepted: 02/03/2024] [Indexed: 02/10/2024] Open
Abstract
Eliminating conventional pulsed B0-gradient coils for magnetic resonance imaging (MRI) can significantly reduce the cost of and increase access to these devices. Phase shifts induced by the Bloch-Siegert shift effect have been proposed as a means for gradient-free, RF spatial encoding for low-field MR imaging. However, nonlinear phasor patterns like those generated from loop coils have not been systematically studied in the context of 2D spatial encoding. This work presents an optimization algorithm to select an efficient encoding trajectory among the nonlinear patterns achievable with a given hardware setup. Performance of encoding trajectories or projections was evaluated through simulated and experimental image reconstructions. Results show that the encodings schemes designed by this algorithm provide more efficient spatial encoding than comparison encoding sets, and the method produces images with the predicted spatial resolution and minimal artifacts. Overall, the work demonstrates the feasibility of performing 2D gradient-free, low-field imaging using the Bloch-Siegert shift which is an important step towards creating low-cost, point-of-care MR systems.
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Affiliation(s)
| | - Yonghyun Ha
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Heng Sun
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
| | - Zhehong Zhang
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
| | - Chenhao Sun
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Anja Samardzija
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
| | - Gigi Galiana
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - R Todd Constable
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA.
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA.
- Yale University School of Medicine, Magnetic Resonance Research Center, 300 Cedar Street, New Haven, CT, 06520, USA.
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Wang H, Ying L, Liang D, Cheng J, Jia S, Qiu Z, Shi C, Zou L, Su S, Chang Y, Zhu Y. Accelerating MR Imaging via Deep Chambolle-Pock Network .. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:6818-6821. [PMID: 31947406 DOI: 10.1109/embc.2019.8857141] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Compressed sensing (CS) has been introduced to accelerate data acquisition in MR Imaging. However, CS-MRI methods suffer from detail loss with large acceleration and complicated parameter selection. To address the limitations of existing CS-MRI methods, a model-driven MR reconstruction is proposed that trains a deep network, named CP-net, which is derived from the Chambolle-Pock algorithm to reconstruct the in vivo MR images of human brains from highly undersampled complex k-space data acquired on different types of MR scanners. The proposed deep network can learn the proximal operator and parameters among the Chambolle-Pock algorithm. All of the experiments show that the proposed CP-net achieves more accurate MR reconstruction results, outperforming state-of-the-art methods across various quantitative metrics.
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Shi C, Cheng J, Su S, Zou L, Chen H, Xie G, Liang D, Liu X, Wang H. Three Dimensional Positive Contrast Susceptibility Fast Spin Echo MR Imaging with Variable Excitation Pulses and PD Algorithm .. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:4824-4827. [PMID: 31946941 DOI: 10.1109/embc.2019.8856573] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
A susceptibility-based positive contrast MR technique is applied to image the MR compatible metallic devices by solving a regularized ℓ1 minimization problem. However, the previous SE/FSE sequence is used for the data acquisition which can result in high SAR and low sampling efficiency in 3D imaging. Therefore, a 3D single slab 3D FSE sequence with slab selective and variable excitation pulse is proposed to implement 3D positive contrast MR imaging for low SAR and acquiring high-resolution 3D images within a shorter timeframe. Furthermore, in order to achieve faster reconstruction and better imaging quality of the 3D positive contrast MRI, the primal-dual iteration algorithm is also used to solve the regularized ℓ1 minimization problem. The visualization of the positive contrast and convergence behaviour of the proposed reconstruction framework base on the first-order PD algorithm were tested and validated on phantom experiments, compared with the previous nonlinear conjugate gradient (NLCG), fast iterative soft thresholding (FISTA) and alternating direction method of multipliers (ADMM) algorithms.
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Shi C, Wang H, Xie G, Su S, Huang Y, Chen H, Liu X, Zheng H, Liang D. Susceptibility-based MR Imaging of Nitinol Stent .. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:5753-5756. [PMID: 31947159 DOI: 10.1109/embc.2019.8856775] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Conventional MR techniques have difficulty to accurately localize the stent position and access the stent restenosis because of the effects of susceptibility and radiofrequency (RF) shielding artifacts caused by stent mesh. Previous studies have demonstrated that a susceptibility-based positive contrast MR method exhibits excellent efficacy for visualizing MR compatible metal devices by taking advantage of their high magnetic susceptibility. However, the method is not evaluated in the visualization of stents. Therefore, the purpose of this study is to prospectively assess whether the susceptibility-based positive contrast method can be used to visualize the nitinol stents, with the comparison of two typical MR positive contrast techniques, i.e., susceptibility gradient mapping using the original resolution (SUMO) and the gradient echo acquisition for super-paramagnetic particles with positive contrast (GRASP). The experiment results showed that the susceptibility-based method provided better visualization and more precise localization of the stent than SUMO and GRASP.
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Wang H, Zhou Y, Su S, Hu Z, Liao J, Chang Y. Adaptive Volterra Filter for Parallel MRI Reconstruction. EURASIP JOURNAL ON ADVANCES IN SIGNAL PROCESSING 2019; 2019:34. [DOI: 10.1186/s13634-019-0633-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Accepted: 07/08/2019] [Indexed: 09/12/2023]
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Shi C, Cheng J, Xie G, Su S, Chang Y, Chen H, Liu X, Wang H, Liang D. Positive-contrast susceptibility imaging based on first-order primal-dual optimization. Magn Reson Med 2019; 82:1120-1128. [PMID: 31066102 DOI: 10.1002/mrm.27791] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Revised: 04/09/2019] [Accepted: 04/09/2019] [Indexed: 11/08/2022]
Abstract
PURPOSE To achieve faster reconstruction and better imaging quality of positive-contrast MRI based on the susceptibility mapping by incorporating a primal-dual (PD) formulation. METHODS The susceptibility-based positive contrast MR technique was applied to estimate arbitrary magnetic susceptibility distributions of the metallic devices using a kernel deconvolution algorithm with a regularized ℓ 1 minimization. The regularized positive-contrast inversion problem and its PD formulation were derived. The visualization of the positive contrast and convergence behavior of the PD algorithm were compared with those of the nonlinear conjugate gradient algorithm, fast iterative soft-thresholding algorithm, and alternating direction method of multipliers. These methods were tested and validated on computer simulations and phantom experiments. RESULTS The PD approach could provide a faster reconstruction time compared with other methods. Experimental results showed that the PD algorithm could achieve comparable or even better visualization and accuracy of the metallic interventional devices in positive-contrast imaging with different SNRs and orientations to the B0 field. CONCLUSION A susceptibility-based positive-contrast imaging technique by PD algorithm was proposed. The PD approach has more superior performance than other algorithms in terms of reconstruction time and accuracy for imaging the metallic interventional devices.
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Affiliation(s)
- Caiyun Shi
- Paul C. Lauterbur Research Centre for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China.,Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen, China
| | - Jing Cheng
- Paul C. Lauterbur Research Centre for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China.,Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen, China
| | - Guoxi Xie
- Department of Biomedical Engineering, Guangzhou Medical University, Guangzhou, China
| | - Shi Su
- Paul C. Lauterbur Research Centre for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China
| | - Yuchou Chang
- Computer Science and Engineering Technology Department, University of Houston-Downtown, Houston, Texas
| | - Hanwei Chen
- Department of Radiology, Guangzhou Panyu Central Hospital, Guangzhou, China
| | - Xin Liu
- Paul C. Lauterbur Research Centre for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China
| | - Haifeng Wang
- Paul C. Lauterbur Research Centre for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China
| | - Dong Liang
- Paul C. Lauterbur Research Centre for Biomedical Imaging, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China.,Medical AI Research Centre, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, Guangdong, China
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Scheffler K, Loktyushin A, Bause J, Aghaeifar A, Steffen T, Schölkopf B. Spread‐spectrum magnetic resonance imaging. Magn Reson Med 2019; 82:877-885. [DOI: 10.1002/mrm.27766] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Revised: 03/07/2019] [Accepted: 03/16/2019] [Indexed: 11/11/2022]
Affiliation(s)
- Klaus Scheffler
- High‐Field MR Center Max Planck Institute for Biological Cybernetics Tübingen Germany
- Department for Biomedical Magnetic Resonance University of Tübingen Tübingen Germany
| | - Alexander Loktyushin
- High‐Field MR Center Max Planck Institute for Biological Cybernetics Tübingen Germany
- Department of Empirical Inference Max Planck Institute for Intelligence Systems Tübingen Germany
| | - Jonas Bause
- High‐Field MR Center Max Planck Institute for Biological Cybernetics Tübingen Germany
- Department for Biomedical Magnetic Resonance University of Tübingen Tübingen Germany
| | - Ali Aghaeifar
- High‐Field MR Center Max Planck Institute for Biological Cybernetics Tübingen Germany
- Department for Biomedical Magnetic Resonance University of Tübingen Tübingen Germany
| | - Theodor Steffen
- High‐Field MR Center Max Planck Institute for Biological Cybernetics Tübingen Germany
| | - Bernhard Schölkopf
- Department of Empirical Inference Max Planck Institute for Intelligence Systems Tübingen Germany
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