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Mata Calidonio J, Maddox AI, Hamad-Schifferli K. A novel immunoassay technique using principal component analysis for enhanced detection of emerging viral variants. LAB ON A CHIP 2024; 24:3985-3995. [PMID: 39046406 DOI: 10.1039/d4lc00505h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/25/2024]
Abstract
Rapid diagnostics are critical infectious disease tools that are designed to detect a known biomarker using antibodies specific to that biomarker. However, a way to detect unknown disease variants has not yet been achieved in a paper test format. We describe here a route to make an adaptable paper immunoassay that can detect an unknown biomarker, demonstrating it on SARS-CoV-2 variants. The immunoassay repurposes cross reactive antibodies raised against the alpha variant. Gold nanoparticles of two different colors conjugated to two different antibodies create a colorimetric signal, and machine learning of the resulting colorimetric pattern is used to train the assay to discriminate between variants of alpha and Omicron BA.5. By using principal component analysis, the colorimetric test patterns can pick up and discriminate an unknown variant that it has not encountered before, Omicron BA.1. The test has an accuracy of 100% and a potential calculated discriminatory power of 900. We show that it can be used adaptively and that it can be used to pick up emerging variants without the need to raise new antibodies.
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Affiliation(s)
| | - Arianna I Maddox
- Department of Biology, University of Massachusetts Boston, Boston, MA, USA
| | - Kimberly Hamad-Schifferli
- Department of Engineering, University of Massachusetts Boston, Boston, MA, USA.
- School for the Environment, University of Massachusetts Boston, Boston, MA, USA
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Huang Y, Guo X, Wu Y, Chen X, Feng L, Xie N, Shen G. Nanotechnology's frontier in combatting infectious and inflammatory diseases: prevention and treatment. Signal Transduct Target Ther 2024; 9:34. [PMID: 38378653 PMCID: PMC10879169 DOI: 10.1038/s41392-024-01745-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 12/27/2023] [Accepted: 01/11/2024] [Indexed: 02/22/2024] Open
Abstract
Inflammation-associated diseases encompass a range of infectious diseases and non-infectious inflammatory diseases, which continuously pose one of the most serious threats to human health, attributed to factors such as the emergence of new pathogens, increasing drug resistance, changes in living environments and lifestyles, and the aging population. Despite rapid advancements in mechanistic research and drug development for these diseases, current treatments often have limited efficacy and notable side effects, necessitating the development of more effective and targeted anti-inflammatory therapies. In recent years, the rapid development of nanotechnology has provided crucial technological support for the prevention, treatment, and detection of inflammation-associated diseases. Various types of nanoparticles (NPs) play significant roles, serving as vaccine vehicles to enhance immunogenicity and as drug carriers to improve targeting and bioavailability. NPs can also directly combat pathogens and inflammation. In addition, nanotechnology has facilitated the development of biosensors for pathogen detection and imaging techniques for inflammatory diseases. This review categorizes and characterizes different types of NPs, summarizes their applications in the prevention, treatment, and detection of infectious and inflammatory diseases. It also discusses the challenges associated with clinical translation in this field and explores the latest developments and prospects. In conclusion, nanotechnology opens up new possibilities for the comprehensive management of infectious and inflammatory diseases.
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Affiliation(s)
- Yujing Huang
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China
| | - Xiaohan Guo
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China
| | - Yi Wu
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China
| | - Xingyu Chen
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China
| | - Lixiang Feng
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China
| | - Na Xie
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China.
| | - Guobo Shen
- Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, and West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, 610041, China.
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Wang X, Zhang R, Ma X, Xu Z, Ma M, Zhang T, Ma Y, Shi F. Carbon dots@noble metal nanoparticle composites: research progress report. Analyst 2024; 149:665-688. [PMID: 38205593 DOI: 10.1039/d3an01580g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
Carbon dots@noble metal nanoparticle composites are formed by combining carbon dots and metal nanoparticles using various strategies. Carbon dots exhibit a reducing ability and function as stabilisers; consequently, metal-ion solutions can be directly reduced by them to synthesise gold, silver, and gold-silver alloy particles. Carbon dots@gold/silver/gold-silver particle composites have demonstrated the potential for several practical applications owing to their superior properties and simple preparation process. Until now, several review articles have been published to summarise fluorescent carbon dots or noble metal nanomaterials. Compared with metal-free carbon dots, carbon dots@noble metal nanoparticles have a unique morphology and structure, resulting in new physicochemical properties, which allow for sensing, bioimaging, and bacteriostasis applications. Therefore, to promote the effective development of carbon dots@noble metal nanoparticle composites, this paper primarily reviews carbon dots@gold/silver/gold-silver alloy nanoparticle composites for the first time in terms of the following aspects. (1) The synthesis strategies of carbon dots@noble metal nanoparticle composites are outlined. The principle and function of carbon dots in the synthesis strategies are examined. The advantages and disadvantages of these methods and composites are analysed. (2) The characteristics and properties of such composites are described. (3) The applications of these composite materials are summarised. Finally, the potentials and limitations of carbon dots@noble metal nanoparticle composites are discussed, thus laying the foundation for their further development.
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Affiliation(s)
- Xuejing Wang
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Renyin Zhang
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Xiaoyu Ma
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Zhihua Xu
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Mingze Ma
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Tieying Zhang
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Yu Ma
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
| | - Feng Shi
- College of Life Sciences, Shihezi University, Shihezi 832003, China.
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Athira ET, Satija J. Plasmonic nanoparticle etching-based optical sensors: current status and future prospects. Analyst 2023; 148:6188-6200. [PMID: 37916263 DOI: 10.1039/d3an01244a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2023]
Abstract
Plasmonic nanoparticles are an emerging tool for developing label-free multicolorimetric sensors for biosensing and chemosensing applications. The color absorbed by nanoparticles from visible light is influenced by their size, shape, orientation, and interparticle distance. Differently sized and shaped gold and silver nanoparticles exhibit a wide range of colors, aiding in the development of label-free sensors. Etching is the process of oxidizing nanoparticles, which alters their aspect ratio, shape, plasmonic peak, and outward appearance. It is typically used to create sensitive sensing platforms. Through etching, analytes could be detected in a simple, sensitive, and selective manner. The multicolor readout of nanoparticle etching-based multicolorimetric sensors can overcome the limitations of conventional colorimetric assays and improve the accuracy of visual inspection. This review discusses different approaches for target sensing using nanoparticle etching strategies like direct etching, enzyme-mediated etching, chemical reaction-driven etching, and anti-etching-based sensors and their mechanisms. In the future, etching strategies could be modified into portable sensing devices to detect a variety of analytes, which will aid in the development of on-time, in situ, and point-of-care sensing systems.
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Affiliation(s)
- E T Athira
- Centre for Nanobiotechnology, Vellore Institute of Technology, Vellore, Tamil Nadu, 632014, India.
| | - Jitendra Satija
- Centre for Nanobiotechnology, Vellore Institute of Technology, Vellore, Tamil Nadu, 632014, India.
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Cheng YH, Chande C, Li Z, Haridas Menon N, Kaaliveetil S, Basuray S. Optimization of Electrolytes with Redox Reagents to Improve the Impedimetric Signal for Use with a Low-Cost Analyzer. BIOSENSORS 2023; 13:999. [PMID: 38131759 PMCID: PMC10741443 DOI: 10.3390/bios13120999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 11/10/2023] [Accepted: 11/24/2023] [Indexed: 12/23/2023]
Abstract
The most well-known criterion for POC devices is ASSURED, and affordability, i.e., using low-cost instrumentation, is the most challenging one. This manuscript provides a pathway for transitioning ESSENCE, an impedance-based biosensor platform, from using an expensive benchtop analyzer-KeySight 4294A (~$50k)-to using a significantly portable and cheaper USB oscilloscope-Analog Discovery 2 (~$200) -with similar sensitivity (around 100 times price difference). To achieve this, we carried out a fundamental study of the interplay between an electrolyte like potassium chloride (KCl), and an electrolyte buffer like phosphate buffered saline (PBS) in the presence and absence of a redox buffer like ferro/ferricyanide system and ([Ru(bpy)3]2+). Redox molecules in the electrolyte caused a significant change in the Nyquist curve of the impedance depending on the redox molecule type. The redox species and the background electrolyte have their own RC semicircles in the Nyquist curve, whose overlap depends on the redox concentration and electrolyte ionic strength. We found that by increasing the electrolyte ionic strength or the redox concentration, the RC semicircle moves to higher frequencies and vice versa. Importantly, the use of the buffer electrolyte, instead of KCl, led to a lower standard deviation and overall signal (lesser sensitivity). However, to achieve the best results from the biorecognition signal, we chose a buffered electrolyte like PBS with high ionic strength and lowered the redox probe concentrations to minimize the standard deviation and reduce any noise from migrating to the low-cost analyzer. Comparing the two analyzers shows similar results, with a lowered detection limit from the low-cost analyzer.
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Affiliation(s)
| | | | | | | | | | - Sagnik Basuray
- Otto H. York Department of Chemical and Materials Engineering, New Jersey Institute of Technology, 323 Dr Martin Luther King Jr Blvd, Newark, NJ 07102, USA
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Xi J, Bu T, Wu H, Wang Y, Cao Y, Xuan C, Feng Q, Wang L. Novel Dumbbell-like CeVO 4 Carrier-Based Immunochromatographic Assay for Highly Sensitive T-2 Toxin Detection in Food Samples. Anal Chem 2023; 95:15531-15539. [PMID: 37753722 DOI: 10.1021/acs.analchem.3c01669] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/28/2023]
Abstract
Improving the sensitivity of immunochromatographic assays (ICAs) lies in the signal strength and probe activity of the labeled tracers, and the color properties and structure of the labeled tracers are key factors affecting the biological activity. In this study, cerium vanadate (CeVO4) of different sizes and shapes (230, 1058, and 710 nm) was synthesized to investigate its impact on the performance of ICA for T-2 detection. The prepared CeVO4 possessed outstanding stability, a large specific surface area, superior biocompatibility, and high compatibility with T-2 mAb (affinity constant was 3.14 × 108 M-1). As labeling probes for competitive ICA, the results showed that 1058 nm of CeVO4 as labels exhibited the best detection performance, with a limit of detection (LOD) of 0.079 ng/mL, which was substantially 19-fold less than the average of gold nanoparticle ICA. Additionally, CeVO4-ICA was effectively used to detect T-2 toxin, and the recovery rate for spiking corn and oatmeal samples was determined to be 81.27-115.44% (relative standard deviation <9.16%). The above information demonstrates the efficiency and applicability of CeVO4-ICA as a technique for quick and thorough identification of T-2 toxin residues in food.
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Affiliation(s)
- Jia Xi
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
| | - Tong Bu
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- College of Food Science and Technology, Henan Agricultural University, Zhengzhou 450002, Henan, China
| | - Haiyu Wu
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
| | - Ying Wang
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
| | - Yuanyuan Cao
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
| | - Chenyu Xuan
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
| | - Qinlin Feng
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
| | - Li Wang
- College of Food Science and Engineering, Northwest A&F University, Yangling 712100, Shaanxi, China
- Shenzhen Research Institute, Northwest A&F University, Shenzhen 518000, China
- School of Chemistry, Guangzhou Key Laboratory of Analytical Chemistry for Biomedicine, South China Normal University, Guangzhou 510006, China
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Vasilakis N, Hanley KA. The Coordinating Research on Emerging Arboviral Threats Encompassing the Neotropics (CREATE-NEO). ZOONOSES (BURLINGTON, MASS.) 2023; 3:16. [PMID: 37860630 PMCID: PMC10586723 DOI: 10.15212/zoonoses-2022-0047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2023]
Abstract
Arthropod-borne viruses, such as dengue, Zika and Mayaro, are emerging at an accelerating rate in the neotropics. The Coordinating Research on Emerging Arboviral Threats Encompassing the Neotropics (CREATE-NEO) project, a part of the NIH funded Centers for Research in Emerging Infectious Diseases (CREID) network provides a nimble and flexible network of surveillance sites in Central and South America coupled to cutting-edge modeling approaches in order to anticipate and counter these threats to public health. Collected data and generated models will be utilized to inform and alert local, regional and global public health agencies of enzootic arboviruses with high risk of spillover, emergence and transmission among humans, and/or international spread. Critically, CREATE-NEO builds capacity in situ to anticipate, detect and respond to emerging arboviruses at their point of origin, thereby maximizing the potential to avert full-blown emergence and widespread epidemics.
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Affiliation(s)
- Nikos Vasilakis
- Department of Pathology, University of Texas Medical Branch, 301 University Blvd., Galveston, TX 77555-0609, USA
- Department of Preventive Medicine and Population Health, The University of Texas Medical Branch, Galveston, TX 77555-1150, USA
- Center for Vector-Borne and Zoonotic Diseases, The University of Texas Medical Branch, Galveston, TX 77555-0609, USA
- Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, 301 University Blvd., Galveston, TX 77555-0609, USA
- Center for Tropical Diseases, University of Texas Medical Branch, 301 University Blvd., Galveston, TX 77555-0609, USA
- Institute for Human Infection and Immunity, University of Texas Medical Branch, 301 University Blvd., Galveston, TX 77555-0610, USA
| | - Kathryn A. Hanley
- Department of Biology, New Mexico State University, Las Cruces, NM 88003, USA
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