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Krishnamoorthi A, Salom D, Wu A, Palczewski K, Rentzepis PM. Ultrafast transient absorption spectra and kinetics of human blue cone visual pigment at room temperature. Proc Natl Acad Sci U S A 2024; 121:e2414037121. [PMID: 39356673 PMCID: PMC11474067 DOI: 10.1073/pnas.2414037121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2024] [Accepted: 09/01/2024] [Indexed: 10/04/2024] Open
Abstract
The ultrafast photochemical reaction mechanism, transient spectra, and transition kinetics of the human blue cone visual pigment have been recorded at room temperature. Ultrafast time-resolved absorption spectroscopy revealed the progressive formation and decay of several metastable photo-intermediates, corresponding to the Batho to Meta-II photo-intermediates previously observed with bovine rhodopsin and human green cone opsin, on the picosecond to millisecond timescales following pulsed excitation. The experimental data reveal several interesting similarities and differences between the photobleaching sequences of bovine rhodopsin, human green cone opsin, and human blue cone opsin. While Meta-II formation kinetics are comparable between bovine rhodopsin and blue cone opsin, the transition kinetics of earlier photo-intermediates and qualitative characteristics of the Meta-I to Meta-II transition are more similar for blue cone opsin and green cone opsin. Additionally, the blue cone photo-intermediate spectra exhibit a high degree of overlap with uniquely small spectral shifts. The observed variation in Meta-II formation kinetics between rod and cone visual pigments is explained based on key structural differences.
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Affiliation(s)
- Arjun Krishnamoorthi
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX77843
| | - David Salom
- Department of Ophthalmology, Gavin Herbert Eye Institute, University of California Irvine, Irvine, CA92697
- Department of Ophthalmology, School of Medicine, University of California Irvine, Irvine, CA92697
| | - Arum Wu
- Department of Ophthalmology, Gavin Herbert Eye Institute, University of California Irvine, Irvine, CA92697
- Department of Ophthalmology, School of Medicine, University of California Irvine, Irvine, CA92697
| | - Krzysztof Palczewski
- Department of Ophthalmology, Gavin Herbert Eye Institute, University of California Irvine, Irvine, CA92697
- Department of Ophthalmology, School of Medicine, University of California Irvine, Irvine, CA92697
- Department of Chemistry, University of California Irvine, Irvine, CA92697
- Department of Physiology and Biophysics, University of California Irvine, Irvine, CA92697
- Department of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA92697
| | - Peter M. Rentzepis
- Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX77843
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Brito M, Sorbier C, Mignet N, Boudy V, Borchard G, Vacher G. Understanding the Impact of Polyunsaturated Fatty Acids on Age-Related Macular Degeneration: A Review. Int J Mol Sci 2024; 25:4099. [PMID: 38612907 PMCID: PMC11012607 DOI: 10.3390/ijms25074099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 04/01/2024] [Accepted: 04/03/2024] [Indexed: 04/14/2024] Open
Abstract
Age-related Macular Degeneration (AMD) is a multifactorial ocular pathology that destroys the photoreceptors of the macula. Two forms are distinguished, dry and wet AMD, with different pathophysiological mechanisms. Although treatments were shown to be effective in wet AMD, they remain a heavy burden for patients and caregivers, resulting in a lack of patient compliance. For dry AMD, no real effective treatment is available in Europe. It is, therefore, essential to look for new approaches. Recently, the use of long-chain and very long-chain polyunsaturated fatty acids was identified as an interesting new therapeutic alternative. Indeed, the levels of these fatty acids, core components of photoreceptors, are significantly decreased in AMD patients. To better understand this pathology and to evaluate the efficacy of various molecules, in vitro and in vivo models reproducing the mechanisms of both types of AMD were developed. This article reviews the anatomy and the physiological aging of the retina and summarizes the clinical aspects, pathophysiological mechanisms of AMD and potential treatment strategies. In vitro and in vivo models of AMD are also presented. Finally, this manuscript focuses on the application of omega-3 fatty acids for the prevention and treatment of both types of AMD.
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Affiliation(s)
- Maëlis Brito
- Unither Développement Bordeaux, Avenue Toussaint Catros, 33185 Le Haillan, France
- Université Paris Cité, CNRS, INSERM, UTCBS, Unité de Technologies Chimiques et Biologiques pour la Santé, F-75006 Paris, France
- Département de Recherche et Développement (DRDP), Agence Générale des Equipements et Produits de Santé (AGEPS), Assistance Publique Hôpitaux de Paris (AP-HP), 7 Rue du Fer-à-Moulin, 75005 Paris, France
- Institute of Pharmaceutical Sciences of Western Switzerland (ISPSO), School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, 1206 Geneva, Switzerland
| | - Capucine Sorbier
- Unither Développement Bordeaux, Avenue Toussaint Catros, 33185 Le Haillan, France
| | - Nathalie Mignet
- Université Paris Cité, CNRS, INSERM, UTCBS, Unité de Technologies Chimiques et Biologiques pour la Santé, F-75006 Paris, France
| | - Vincent Boudy
- Université Paris Cité, CNRS, INSERM, UTCBS, Unité de Technologies Chimiques et Biologiques pour la Santé, F-75006 Paris, France
- Département de Recherche et Développement (DRDP), Agence Générale des Equipements et Produits de Santé (AGEPS), Assistance Publique Hôpitaux de Paris (AP-HP), 7 Rue du Fer-à-Moulin, 75005 Paris, France
| | - Gerrit Borchard
- Institute of Pharmaceutical Sciences of Western Switzerland (ISPSO), School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, 1206 Geneva, Switzerland
| | - Gaëlle Vacher
- Institute of Pharmaceutical Sciences of Western Switzerland (ISPSO), School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, 1206 Geneva, Switzerland
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3
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Lucas RJ, Allen AE, Brainard GC, Brown TM, Dauchy RT, Didikoglu A, Do MTH, Gaskill BN, Hattar S, Hawkins P, Hut RA, McDowell RJ, Nelson RJ, Prins JB, Schmidt TM, Takahashi JS, Verma V, Voikar V, Wells S, Peirson SN. Recommendations for measuring and standardizing light for laboratory mammals to improve welfare and reproducibility in animal research. PLoS Biol 2024; 22:e3002535. [PMID: 38470868 PMCID: PMC10931507 DOI: 10.1371/journal.pbio.3002535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/14/2024] Open
Abstract
Light enables vision and exerts widespread effects on physiology and behavior, including regulating circadian rhythms, sleep, hormone synthesis, affective state, and cognitive processes. Appropriate lighting in animal facilities may support welfare and ensure that animals enter experiments in an appropriate physiological and behavioral state. Furthermore, proper consideration of light during experimentation is important both when it is explicitly employed as an independent variable and as a general feature of the environment. This Consensus View discusses metrics to use for the quantification of light appropriate for nonhuman mammals and their application to improve animal welfare and the quality of animal research. It provides methods for measuring these metrics, practical guidance for their implementation in husbandry and experimentation, and quantitative guidance on appropriate light exposure for laboratory mammals. The guidance provided has the potential to improve data quality and contribute to reduction and refinement, helping to ensure more ethical animal use.
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Affiliation(s)
- Robert J. Lucas
- Centre for Biological Timing, School of Biological Sciences, Faculty of Biology Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Annette E. Allen
- Centre for Biological Timing, School of Biological Sciences, Faculty of Biology Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - George C. Brainard
- Department of Neurology, Thomas Jefferson University, Philadelphia, Pennsylvania, United States of America
| | - Timothy M. Brown
- Centre for Biological Timing, School of Biological Sciences, Faculty of Biology Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Robert T. Dauchy
- Department of Structural and Cellular Biology, Tulane University School of Medicine, Tulane, Louisiana, United States of America
| | - Altug Didikoglu
- Department of Neuroscience, Izmir Institute of Technology, Gülbahçe, Urla, Izmir, Turkey
| | - Michael Tri H. Do
- F.M. Kirby Neurobiology Center and Department of Neurology, Boston Children’s Hospital and Harvard Medical School, Center for Life Science, Boston, Massachusetts, United States of America
| | - Brianna N. Gaskill
- Novartis Institute for Biomedical Research, Cambridge, Massachusetts, United States of America
| | - Samer Hattar
- Section on Light and Circadian Rhythms (SLCR), National Institute of Mental Health, John Edward Porter Neuroscience Research Center, Bethesda, Maryland, United States of America
| | | | - Roelof A. Hut
- Chronobiology Unit, Groningen Institute of Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands
| | - Richard J. McDowell
- Centre for Biological Timing, School of Biological Sciences, Faculty of Biology Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Randy J. Nelson
- Department of Neuroscience, Rockefeller Neuroscience Institute, West Virginia University, Morgantown, West Virginia, United States of America
| | - Jan-Bas Prins
- The Francis Crick Institute, London, United Kingdom
- Leiden University Medical Centre, Leiden, the Netherlands
| | - Tiffany M. Schmidt
- Department of Neurobiology, Northwestern University, Evanston, Illinois, United States of America
| | - Joseph S. Takahashi
- Department of Neuroscience, Peter O’Donnell Jr Brain Institute, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
- Howard Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
| | - Vandana Verma
- NASA Ames Research Center, Space Biosciences Division, Moffett Field, California, United States of America
| | - Vootele Voikar
- Laboratory Animal Center and Neuroscience Center, HiLIFE, University of Helsinki, Helsinki, Finland
| | - Sara Wells
- The Mary Lyon Centre, MRC Harwell, Harwell Campus, Oxfordshire, United Kingdom
| | - Stuart N. Peirson
- Sleep and Circadian Neuroscience Institute (SCNi), Kavli Institute for Nanoscience Discovery, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom
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Feord RC, Gomoliszewska A, Pienaar A, Mouland JW, Brown TM. Colour opponency is widespread across the mouse subcortical visual system and differentially targets GABAergic and non-GABAergic neurons. Sci Rep 2023; 13:9313. [PMID: 37291239 PMCID: PMC10250360 DOI: 10.1038/s41598-023-35885-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Accepted: 05/25/2023] [Indexed: 06/10/2023] Open
Abstract
Colour vision plays many important roles in animal behaviour but the brain pathways processing colour remain surprisingly poorly understood, including in the most commonly used laboratory mammal, mice. Indeed, particular features of mouse retinal organisation present challenges in defining the mechanisms underlying colour vision in mice and have led to suggestions that this may substantially rely on 'non-classical' rod-cone opponency. By contrast, studies using mice with altered cone spectral sensitivity, to facilitate application of photoreceptor-selective stimuli, have revealed widespread cone-opponency across the subcortical visual system. To determine the extent to which such findings are truly reflective of wildtype mouse colour vision, and facilitate neural circuit mapping of colour-processing pathways using intersectional genetic approaches, we here establish and validate stimuli for selectively manipulating excitation of the native mouse S- and M-cone opsin classes. We then use these to confirm the widespread appearance of cone-opponency (> 25% of neurons) across the mouse visual thalamus and pretectum. We further extend these approaches to map the occurrence of colour-opponency across optogenetically identified GABAergic (GAD2-expressing) cells in key non-image forming visual centres (pretectum and intergeniculate leaflet/ventral lateral geniculate; IGL/vLGN). Strikingly, throughout, we find S-ON/M-OFF opponency is specifically enriched in non-GABAergic cells, with identified GABAergic cells in the IGL/VLGN entirely lacking this property. Collectively, therefore, we establish an important new approach for studying cone function in mice, confirming a surprisingly extensive appearance of cone-opponent processing in the mouse visual system and providing new insight into functional specialisation of the pathways processing such signals.
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Affiliation(s)
- R C Feord
- Centre for Biological Timing, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK
| | - A Gomoliszewska
- Centre for Biological Timing, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK
| | - A Pienaar
- Centre for Biological Timing, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK
| | - J W Mouland
- Centre for Biological Timing, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK
| | - T M Brown
- Centre for Biological Timing, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.
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5
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Thüs P, Lunau K, Wester P. Associative colour learning and discrimination in the South African Cape rock sengi Elephantulus edwardii (Macroscelidea, Afrotheria, Mammalia). MAMMALIA 2022. [DOI: 10.1515/mammalia-2022-0034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Abstract
Beside insects, sengis also consume plant material such as leaves, fruits, seeds and floral nectar. It is known that they use olfaction for foraging, but little is known about their vision and visual learning capabilities. Colour vision has been tested in two species, showing that they are likely dichromats (green- and blue-sensitive retinal cone-photoreceptors, meaning red-green colour blind). Our aim was to examine the learning and colour discrimination abilities of another species, Elephantulus edwardii. Using training procedures and choice experiments, we tested the hypotheses that the animals can associate a reward with trained colours and that they can discriminate between different colour hues. The sengis preferred the trained colours over the others, indicating associative learning. They could discriminate between all tested colours (blue, red, green, yellow). The sengis’ colour choice behaviour indicates that the animals can use also colour features to find food plant material. Additionally, learning abilities most likely are essential for the sengis’ foraging activities, for instance by associating floral or fruit shape, colour or scent with nectar or ripe fruit, to increase the efficiency to locate food sources.
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Affiliation(s)
- Patricia Thüs
- Institute of Sensory Ecology , Heinrich-Heine-University , Düsseldorf , Germany
| | - Klaus Lunau
- Institute of Sensory Ecology , Heinrich-Heine-University , Düsseldorf , Germany
| | - Petra Wester
- Institute of Sensory Ecology , Heinrich-Heine-University , Düsseldorf , Germany
- School of Life Sciences , University of KwaZulu-Natal , PB X01 , Pietermaritzburg 3209 , South Africa
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6
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Christenson MP, Mousavi SN, Oriol E, Heath SL, Behnia R. Exploiting colour space geometry for visual stimulus design across animals. Philos Trans R Soc Lond B Biol Sci 2022; 377:20210280. [PMID: 36058250 PMCID: PMC9441238 DOI: 10.1098/rstb.2021.0280] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2021] [Accepted: 01/18/2022] [Indexed: 11/12/2022] Open
Abstract
Colour vision represents a vital aspect of perception that ultimately enables a wide variety of species to thrive in the natural world. However, unified methods for constructing chromatic visual stimuli in a laboratory setting are lacking. Here, we present stimulus design methods and an accompanying programming package to efficiently probe the colour space of any species in which the photoreceptor spectral sensitivities are known. Our hardware-agnostic approach incorporates photoreceptor models within the framework of the principle of univariance. This enables experimenters to identify the most effective way to combine multiple light sources to create desired distributions of light, and thus easily construct relevant stimuli for mapping the colour space of an organism. We include methodology to handle uncertainty of photoreceptor spectral sensitivity as well as to optimally reconstruct hyperspectral images given recent hardware advances. Our methods support broad applications in colour vision science and provide a framework for uniform stimulus designs across experimental systems. This article is part of the theme issue 'Understanding colour vision: molecular, physiological, neuronal and behavioural studies in arthropods'.
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Affiliation(s)
- Matthias P. Christenson
- Zuckerman Mind Brain Behavior Institute, Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - S. Navid Mousavi
- Zuckerman Mind Brain Behavior Institute, Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - Elie Oriol
- Laboratoire de Physique de l'Ecole Normale Supérieure, CNRS, Ecole Normale Supérieure, PSL University, Sorbonne Université, Université de Paris, Paris, France
| | - Sarah L. Heath
- Zuckerman Mind Brain Behavior Institute, Department of Neuroscience, Columbia University, New York, NY 10027, USA
| | - Rudy Behnia
- Zuckerman Mind Brain Behavior Institute, Department of Neuroscience, Columbia University, New York, NY 10027, USA
- Kavli Institute for Brain Science, Columbia University, New York, NY 10027, USA
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Abstract
Ants are ecologically one of the most important groups of insects and exhibit impressive capabilities for visual learning and orientation. Studies on numerous ant species demonstrate that ants can learn to discriminate between different colours irrespective of light intensity and modify their behaviour accordingly. However, the findings across species are variable and inconsistent, suggesting that our understanding of colour vision in ants and what roles ecological and phylogenetic factors play is at an early stage. This review provides a brief synopsis of the critical findings of the past century of research by compiling studies that address molecular, physiological and behavioural aspects of ant colour vision. With this, we aim to improve our understanding of colour vision and to gain deeper insights into the mysterious and colourful world of ants. This article is part of the theme issue ‘Understanding colour vision: molecular, physiological, neuronal and behavioural studies in arthropods’.
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Affiliation(s)
- Ayse Yilmaz
- Department of Biology, Lund Vision Group, University of Lund, 223 62 Lund, Sweden
| | - Johannes Spaethe
- Behavioral Physiology and Sociobiology (Zoology II), Biocenter, University of Würzburg, Sanderring 2, 97070 Würzburg, Germany
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8
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Surov IA. Quantum core affect. Color-emotion structure of semantic atom. Front Psychol 2022; 13:838029. [PMID: 36248471 PMCID: PMC9554469 DOI: 10.3389/fpsyg.2022.838029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Accepted: 08/08/2022] [Indexed: 12/04/2022] Open
Abstract
Psychology suffers from the absence of mathematically-formalized primitives. As a result, conceptual and quantitative studies lack an ontological basis that would situate them in the company of natural sciences. The article addresses this problem by describing a minimal psychic structure, expressed in the algebra of quantum theory. The structure is demarcated into categories of emotion and color, renowned as elementary psychological phenomena. This is achieved by means of quantum-theoretic qubit state space, isomorphic to emotion and color experiences both in meaning and math. In particular, colors are mapped to the qubit states through geometric affinity between the HSL-RGB color solids and the Bloch sphere, widely used in physics. The resulting correspondence aligns with the recent model of subjective experience, producing a unified spherical map of emotions and colors. This structure is identified as a semantic atom of natural thinking-a unit of affectively-colored personal meaning, involved in elementary acts of a binary decision. The model contributes to finding a unified ontology of both inert and living Nature, bridging previously disconnected fields of research. In particular, it enables theory-based coordination of emotion, decision, and cybernetic sciences, needed to achieve new levels of practical impact.
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de Grip WJ, Ganapathy S. Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering. Front Chem 2022; 10:879609. [PMID: 35815212 PMCID: PMC9257189 DOI: 10.3389/fchem.2022.879609] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Accepted: 05/16/2022] [Indexed: 01/17/2023] Open
Abstract
The first member and eponym of the rhodopsin family was identified in the 1930s as the visual pigment of the rod photoreceptor cell in the animal retina. It was found to be a membrane protein, owing its photosensitivity to the presence of a covalently bound chromophoric group. This group, derived from vitamin A, was appropriately dubbed retinal. In the 1970s a microbial counterpart of this species was discovered in an archaeon, being a membrane protein also harbouring retinal as a chromophore, and named bacteriorhodopsin. Since their discovery a photogenic panorama unfolded, where up to date new members and subspecies with a variety of light-driven functionality have been added to this family. The animal branch, meanwhile categorized as type-2 rhodopsins, turned out to form a large subclass in the superfamily of G protein-coupled receptors and are essential to multiple elements of light-dependent animal sensory physiology. The microbial branch, the type-1 rhodopsins, largely function as light-driven ion pumps or channels, but also contain sensory-active and enzyme-sustaining subspecies. In this review we will follow the development of this exciting membrane protein panorama in a representative number of highlights and will present a prospect of their extraordinary future potential.
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Affiliation(s)
- Willem J. de Grip
- Leiden Institute of Chemistry, Department of Biophysical Organic Chemistry, Leiden University, Leiden, Netherlands
- Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands
| | - Srividya Ganapathy
- Department of Imaging Physics, Delft University of Technology, Netherlands
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Eaton MD, Benites P, Campillo L, Wilson RE, Sonsthagen SA. Gull Plumages are, and are Not, What They Appear to Human Vision. ANN ZOOL FENN 2022. [DOI: 10.5735/086.059.0116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Muir D. Eaton
- Biology Department, 2500 University Ave, Drake University, Des Moines, Iowa 50310, USA
| | - Pilar Benites
- Museo de Zoología “Alfonso L. Herrera”, Facultad de Ciencias, Universidad Nacional Autónoma de México, Apartado Postal 70-399, Mexico City 04510, Mexico
| | - Luke Campillo
- School of Life Sciences, University of Hawai'i – Mānoa, 2538 McCarthy Mall, Honolulu, HI 96822, USA
| | - Robert E. Wilson
- National Museum of Natural History, Smithsonian Institution, 10th Street & Constitution Ave. NW, Washington, DC 20560, USA
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Silva DJA, Erickson MF, dos Santos Guidi R, Pessoa DMA. Thin-fingered fiddler crabs display a natural preference for UV light cues but show no sensory bias to other hypertrophied claw coloration. Behav Processes 2022; 200:104667. [DOI: 10.1016/j.beproc.2022.104667] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 05/06/2022] [Accepted: 05/30/2022] [Indexed: 12/27/2022]
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Bertolesi GE, Debnath N, Atkinson-Leadbeater K, Niedzwiecka A, McFarlane S. Distinct type II opsins in the eye decode light properties for background adaptation and behavioural background preference. Mol Ecol 2021; 30:6659-6676. [PMID: 34592025 DOI: 10.1111/mec.16203] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 09/02/2021] [Accepted: 09/10/2021] [Indexed: 12/17/2022]
Abstract
Crypsis increases survival by reducing predator detection. Xenopus laevis tadpoles decode light properties from the substrate to induce two responses: a cryptic coloration response where dorsal skin pigmentation is adjusted to the colour of the substrate (background adaptation) and a behavioural crypsis where organisms move to align with a specific colour surface (background preference). Both processes require organisms to detect reflected light from the substrate. We explored the relationship between background adaptation and preference and the light properties able to trigger both responses. We also analysed which retinal photosensor (type II opsin) is involved. Our results showed that these two processes are segregated mechanistically, as there is no correlation between the preference for a specific background with the level of skin pigmentation, and different dorsal retina-localized type II opsins appear to underlie the two crypsis modes. Indeed, inhibition of melanopsin affects background adaptation but not background preference. Instead, we propose pinopsin is the photosensor involved in background preference. pinopsin mRNA is co-expressed with mRNA for the sws1 cone photopigment in dorsally located photoreceptors. Importantly, the developmental onset of pinopsin expression aligns with the emergence of the preference for a white background, but after the background adaptation phenotype appears. Furthermore, white background preference of tadpoles is associated with increased pinopsin expression, a feature that is lost in premetamorphic froglets along with a preference for a white background. Thus, our data show a mechanistic dissociation between background adaptation and background preference, and we suggest melanopsin and pinopsin, respectively, initiate the two responses.
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Affiliation(s)
- Gabriel E Bertolesi
- Hotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada.,Department of Cell Biology and Anatomy, Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada
| | - Nilakshi Debnath
- Hotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada.,Department of Cell Biology and Anatomy, Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada
| | | | - Anna Niedzwiecka
- Department of Chemistry, University of Calgary, Calgary, Alberta, Canada
| | - Sarah McFarlane
- Hotchkiss Brain Institute, Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada.,Department of Cell Biology and Anatomy, Alberta Children's Hospital Research Institute, Calgary, Alberta, Canada
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13
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Barros PKS, Castro FN, Pessoa DMA. Detection of conspicuous and cryptic food by common marmosets (Callithrix jacchus): An evaluation of the importance of color and shape cues. Behav Processes 2021; 192:104495. [PMID: 34487831 DOI: 10.1016/j.beproc.2021.104495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Revised: 08/21/2021] [Accepted: 09/01/2021] [Indexed: 11/25/2022]
Abstract
In primates, the advantage of trichromacy (i.e., color vision expressed by most humans) over dichromacy (i.e., color vision expressed by many colorblind humans) has been linked to the detection of yellowish/reddish targets against a background of mature green leaves. Nevertheless, mostly because of studies conducted in humans, we know that achromatic cues might also play an important role in object identification, particularly when camouflage is involved. For instance, dichromacy favors the detection of camouflaged targets by exploitation of shape cues. The present study sought to evaluate the relative importance of color and shape cues on the detection of food targets by female and male marmosets (Callithrix jacchus). Animals were observed with respect to their foraging behavior and the number of food targets captured. We confirmed that females are advantageous in detecting conspicuous food against a green background and revealed that females and males rely on shape cues to segregate cryptic food. Unexpectedly, males outperformed females in cryptic food foraging, while camouflage improved males' (but not females') performance. Here we show that dichromats could potentially benefit from a better segregation of green natural targets (e.g., immature fruits, green insects, and gum trees) when viewed against a green dappled background.
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Affiliation(s)
- Priscilla Kelly Silva Barros
- Laboratory of Sensory Ecology, Department of Physiology and Behavior, Biosciences Center, Federal University of Rio Grande do Norte, Natal, RN, 59072-970, Brazil; Primate Center, Department of Physiology and Behavior, Biosciences Center, Federal University of Rio Grande do Norte, Natal, RN, 59072-970, Brazil
| | - Felipe Nalon Castro
- Laboratory of Human Behavior Evolution, Department of Physiology and Behavior, Biosciences Center, Federal University of Rio Grande do Norte, Natal, RN, 59072-970, Brazil
| | - Daniel Marques Almeida Pessoa
- Laboratory of Sensory Ecology, Department of Physiology and Behavior, Biosciences Center, Federal University of Rio Grande do Norte, Natal, RN, 59072-970, Brazil; Primate Center, Department of Physiology and Behavior, Biosciences Center, Federal University of Rio Grande do Norte, Natal, RN, 59072-970, Brazil.
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14
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de Moraes PZ, Diniz P, Spyrides MHC, Pessoa DMA. The effect of pelage, background, and distance on predator detection and the evolution of primate color vision. Am J Primatol 2021; 83:e23230. [PMID: 33475188 DOI: 10.1002/ajp.23230] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2020] [Revised: 10/23/2020] [Accepted: 11/17/2020] [Indexed: 11/10/2022]
Abstract
Primates' predators, such as carnivore mammals, usually rely on camouflage to increase proximity to prey and start a predatory attempt. Camouflage depends not only on the color pattern presented by a predator's pelage but also on the background scene in which the hunting takes place. Another factor that influences camouflage effectiveness is prey's color vision since a given camouflage strategy might not work for all visual phenotypes. Still, little research has been made on the effect of primate visual phenotype on predator detection. Here, we investigate the effects of natural pelages, background scenarios, visual phenotypes, and detection distances on predator detection. We used photographs of taxidermized carnivores (ocelots, cougars, and lesser grisons) as detection stimuli, taken in three different natural scenarios (forest, savanna, and grassland), and at two viewing distances (near and far). On a touchscreen monitor, sets of four images (only one containing a hidden animal) were randomly presented to 39 human males (19 dichromats and 20 trichromats). We found that trichromats, when compared to dichromats, present a lower latency and a higher accuracy of carnivore detection for some conditions tested. We also found that pelage color, background scenario, and detection distance interact to influence the effectiveness of camouflage. Our results suggest that trichromacy might be even more advantageous for carnivore detection than thought before, since it facilitates detection of mammals with diverse pelage colorations, in environments with different phytophysiognomies, and at longer distances. We also propose that the higher rates of dichromacy found in modern human societies could have resulted from a relaxation in predation.
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Affiliation(s)
- Pedro Z de Moraes
- Laboratory of Sensory Ecology, Department of Physiology and Behavior, Federal University of Rio Grande do Norte, Natal, 59078-970, Brazil
| | - Pedro Diniz
- Ecology Graduation Program, University of Brasilia, Brasilia, 70910-900, Brazil.,Laboratory of Animal Behavior, Department of Zoology, University of Brasilia, Brasilia, 70910-900, Brazil
| | - Maria Helena C Spyrides
- Department of Statistics, Federal University of Rio Grande do Norte, Natal, 59078-970, Brazil
| | - Daniel M A Pessoa
- Laboratory of Sensory Ecology, Department of Physiology and Behavior, Federal University of Rio Grande do Norte, Natal, 59078-970, Brazil.,Primate Center, Department of Physiology and Behavior, Federal University of Rio Grande do Norte, Natal, 59078-970, Brazil
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15
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Abstract
Color is a fundamental aspect of normal visual experience. This chapter provides an overview of the role of color in human behavior, a survey of current knowledge regarding the genetic, retinal, and neural mechanisms that enable color vision, and a review of inherited and acquired defects of color vision including a discussion of diagnostic tests.
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Affiliation(s)
- Joseph Carroll
- Department of Ophthalmology & Visual Sciences, Medical College of Wisconsin, Milwaukee, WI, United States.
| | - Bevil R Conway
- Laboratory of Sensorimotor Research, National Eye Institute, National Institute of Mental Health, Bethesda, MD, United States.
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16
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Tregillus KEM, Isherwood ZJ, Vanston JE, Engel SA, MacLeod DIA, Kuriki I, Webster MA. Color Compensation in Anomalous Trichromats Assessed with fMRI. Curr Biol 2020; 31:936-942.e4. [PMID: 33326771 DOI: 10.1016/j.cub.2020.11.039] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2020] [Revised: 10/14/2020] [Accepted: 11/16/2020] [Indexed: 11/16/2022]
Abstract
Anomalous trichromacy is a common form of congenital color deficiency resulting from a genetic alteration in the photopigments of the eye's light receptors. The changes reduce sensitivity to reddish and greenish hues, yet previous work suggests that these observers may experience the world to be more colorful than their altered receptor sensitivities would predict, potentially indicating an amplification of post-receptoral signals. However, past evidence suggesting such a gain adjustment rests on subjective measures of color appearance or salience. We directly tested for neural amplification by using fMRI to measure cortical responses in color-anomalous and normal control observers. Color contrast response functions were measured in two experiments with different tasks to control for attentional factors. Both experiments showed a predictable reduction in chromatic responses for anomalous trichromats in primary visual cortex. However, in later areas V2v and V3v, chromatic responses in the two groups were indistinguishable. Our results provide direct evidence for neural plasticity that compensates for the deficiency in the initial receptor color signals and suggest that the site of this compensation is in early visual cortex.
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Affiliation(s)
- Katherine E M Tregillus
- Department of Psychology, University of Nevada, Reno, 1664 N. Virginia Street, Reno, NV 89557, USA; Department of Psychology, University of Minnesota, Twin Cities, 75 E River Road, Minneapolis, MN 55455, USA.
| | - Zoey J Isherwood
- Department of Psychology, University of Nevada, Reno, 1664 N. Virginia Street, Reno, NV 89557, USA
| | - John E Vanston
- Department of Psychology, University of Nevada, Reno, 1664 N. Virginia Street, Reno, NV 89557, USA
| | - Stephen A Engel
- Department of Psychology, University of Minnesota, Twin Cities, 75 E River Road, Minneapolis, MN 55455, USA
| | - Donald I A MacLeod
- Department of Psychology, University of California, San Diego, Muir Lane, La Jolla, CA 92093, USA
| | - Ichiro Kuriki
- Research Institute for Electrical Communication, Tohoku University, Sendai 2 Chome-1-1 Katahira, Aoba Ward, Sendai Miyagi 980-8577, Japan
| | - Michael A Webster
- Department of Psychology, University of Nevada, Reno, 1664 N. Virginia Street, Reno, NV 89557, USA
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17
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Falcón J, Torriglia A, Attia D, Viénot F, Gronfier C, Behar-Cohen F, Martinsons C, Hicks D. Exposure to Artificial Light at Night and the Consequences for Flora, Fauna, and Ecosystems. Front Neurosci 2020; 14:602796. [PMID: 33304237 PMCID: PMC7701298 DOI: 10.3389/fnins.2020.602796] [Citation(s) in RCA: 55] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Accepted: 10/22/2020] [Indexed: 12/22/2022] Open
Abstract
The present review draws together wide-ranging studies performed over the last decades that catalogue the effects of artificial-light-at-night (ALAN) upon living species and their environment. We provide an overview of the tremendous variety of light-detection strategies which have evolved in living organisms - unicellular, plants and animals, covering chloroplasts (plants), and the plethora of ocular and extra-ocular organs (animals). We describe the visual pigments which permit photo-detection, paying attention to their spectral characteristics, which extend from the ultraviolet into infrared. We discuss how organisms use light information in a way crucial for their development, growth and survival: phototropism, phototaxis, photoperiodism, and synchronization of circadian clocks. These aspects are treated in depth, as their perturbation underlies much of the disruptive effects of ALAN. The review goes into detail on circadian networks in living organisms, since these fundamental features are of critical importance in regulating the interface between environment and body. Especially, hormonal synthesis and secretion are often under circadian and circannual control, hence perturbation of the clock will lead to hormonal imbalance. The review addresses how the ubiquitous introduction of light-emitting diode technology may exacerbate, or in some cases reduce, the generalized ever-increasing light pollution. Numerous examples are given of how widespread exposure to ALAN is perturbing many aspects of plant and animal behaviour and survival: foraging, orientation, migration, seasonal reproduction, colonization and more. We examine the potential problems at the level of individual species and populations and extend the debate to the consequences for ecosystems. We stress, through a few examples, the synergistic harmful effects resulting from the impacts of ALAN combined with other anthropogenic pressures, which often impact the neuroendocrine loops in vertebrates. The article concludes by debating how these anthropogenic changes could be mitigated by more reasonable use of available technology - for example by restricting illumination to more essential areas and hours, directing lighting to avoid wasteful radiation and selecting spectral emissions, to reduce impact on circadian clocks. We end by discussing how society should take into account the potentially major consequences that ALAN has on the natural world and the repercussions for ongoing human health and welfare.
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Affiliation(s)
- Jack Falcón
- Laboratoire Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), MNHN, CNRS FRE 2030, SU, IRD 207, UCN, UA, Paris, France
| | - Alicia Torriglia
- Centre de Recherche des Cordeliers, INSERM U 1138, Ophtalmopole Hôpital Cochin, Assistance Publique - Hôpitaux de Paris, Université de Paris - SU, Paris, France
| | - Dina Attia
- ANSES, French Agency for Food, Environmental and Occupational Health & Safety, Maisons-Alfort, France
| | | | - Claude Gronfier
- Lyon Neuroscience Research Center (CRNL), Waking Team, Inserm UMRS 1028, CNRS UMR 5292, Université Claude Bernard Lyon 1, Lyon, France
| | - Francine Behar-Cohen
- Centre de Recherche des Cordeliers, INSERM U 1138, Ophtalmopole Hôpital Cochin, Assistance Publique - Hôpitaux de Paris, Université de Paris - SU, Paris, France
| | | | - David Hicks
- Inserm, CNRS, Institut des Neurosciences Cellulaires et Intégratives, Université de Strasbourg, Strasbourg, France
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18
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Isherwood ZJ, Joyce DS, Parthasarathy MK, Webster MA. Plasticity in perception: insights from color vision deficiencies. Fac Rev 2020; 9:8. [PMID: 33659940 PMCID: PMC7886061 DOI: 10.12703/b/9-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Inherited color vision deficiencies typically result from a loss or alteration of the visual photopigments absorbing light and thus impact the very first step of seeing. There is growing interest in how subsequent steps in the visual pathway might be calibrated to compensate for the altered receptor signals, with the possibility that color coding and color percepts might be less severely impacted than the receptor differences predict. These compensatory adjustments provide important insights into general questions about sensory plasticity and the sensory and cognitive processes underlying how we experience color.
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Affiliation(s)
| | - Daniel S Joyce
- Department of Psychology, University of Nevada, Reno, NV, USA
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19
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Abstract
Cyanobacteriochromes (CBCRs) are photoswitchable linear tetrapyrrole (bilin)-based light sensors in the phytochrome superfamily with a broad spectral range from the near UV through the far red (330 to 760 nm). The recent discovery of far-red absorbing CBCRs (frCBCRs) has garnered considerable interest from the optogenetic and imaging communities because of the deep penetrance of far-red light into mammalian tissue and the small size of the CBCR protein scaffold. The present studies were undertaken to determine the structural basis for far-red absorption by JSC1_58120g3, a frCBCR from the thermophilic cyanobacterium Leptolyngbya sp. JSC-1 that is a representative member of a phylogenetically distinct class. Unlike most CBCRs that bind phycocyanobilin (PCB), a phycobilin naturally occurring in cyanobacteria and only a few eukaryotic phototrophs, JSC1_58120g3's far-red absorption arises from incorporation of the PCB biosynthetic intermediate 181,182-dihydrobiliverdin (181,182-DHBV) rather than the more reduced and more abundant PCB. JSC1_58120g3 can also yield a far-red-absorbing adduct with the more widespread linear tetrapyrrole biliverdin IXα (BV), thus circumventing the need to coproduce or supplement optogenetic cell lines with PCB. Using high-resolution X-ray crystal structures of 181,182-DHBV and BV adducts of JSC1_58120g3 along with structure-guided mutagenesis, we have defined residues critical for its verdin-binding preference and far-red absorption. Far-red sensing and verdin incorporation make this frCBCR lineage an attractive template for developing robust optogenetic and imaging reagents for deep tissue applications.
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20
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Abstract
Defective color vision comes in various forms and its frequency varies from population to population. This article is concerned with only the sex-linked form of essential hereditary color blindness. A model of a 'small' population is constructed to explore the dynamics of occurrence of color blindness. Different mutation rates are introduced for eggs and sperm. Birth and death rates of affected individuals are assumed to be the same as those in the unaffected. Simulation demonstrates that large changes in frequency occur randomly from the combined effects of mutation, transmission of genes from generation to generation and births and deaths. A reference is made to the hypothesis that observed differences in rates are due to selection in the transition from hunter-gatherer to farmer.
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21
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Sunde E, Pedersen T, Mrdalj J, Thun E, Grønli J, Harris A, Bjorvatn B, Waage S, Skene DJ, Pallesen S. Blue-Enriched White Light Improves Performance but Not Subjective Alertness and Circadian Adaptation During Three Consecutive Simulated Night Shifts. Front Psychol 2020; 11:2172. [PMID: 33013558 PMCID: PMC7462016 DOI: 10.3389/fpsyg.2020.02172] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Accepted: 08/03/2020] [Indexed: 01/28/2023] Open
Abstract
Use of blue-enriched light has received increasing interest regarding its activating and performance sustaining effects. However, studies assessing effects of such light during night work are few, and novel strategies for lighting using light emitting diode (LED) technology need to be researched. In a counterbalanced crossover design, we investigated the effects of a standard polychromatic blue-enriched white light (7000 K; ∼200 lx) compared to a warm white light (2500 K), of similar photon density (∼1.6 × 1014 photons/cm2/s), during three consecutive simulated night shifts. A total of 30 healthy participants [10 males, mean age 23.3 (SD = 2.9) years] were included in the study. Dependent variables comprised subjective alertness using the Karolinska Sleepiness Scale, a psychomotor vigilance task (PVT) and a digit symbol substitution test (DSST), all administered at five time points throughout each night shift. We also assessed dim-light melatonin onset (DLMO) before and after the night shifts, as well as participants' opinion of the light conditions. Subjective alertness and performance on the PVT and DSST deteriorated during the night shifts, but 7000 K light was more beneficial for performance, mainly in terms of fewer errors on the PVT, at the end of the first- and second- night shift, compared to 2500 K light. Blue-enriched light only had a minor impact on PVT response times (RTs), as only the fastest 10% of the RTs were significantly improved in 7000 K compared to 2500 K light. In both 7000 and 2500 K light, the DLMO was delayed in those participants with valid assessment of this parameter [n = 20 (69.0%) in 7000 K light, n = 22 (78.6%) in 2500 K light], with a mean of 2:34 (SE = 0:14) and 2:12 (SE = 0:14) hours, respectively, which was not significantly different between the light conditions. Both light conditions were positively rated, although participants found 7000 K to be more suitable for work yet evaluated 2500 K light as more pleasant. The data indicate minor, but beneficial, effects of 7000 K light compared to 2500 K light on performance during night work. Circadian adaptation did not differ significantly between light conditions, though caution should be taken when interpreting these findings due to missing data. Field studies are needed to investigate similar light interventions in real-life settings, to develop recommendations regarding illumination for night workers. Clinical Trial Registration: www.ClinicalTrials.gov, identifier NCT03203538.
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Affiliation(s)
- Erlend Sunde
- Department of Psychosocial Science, University of Bergen, Bergen, Norway
| | - Torhild Pedersen
- Department of Biological and Medical Psychology, University of Bergen, Bergen, Norway
| | - Jelena Mrdalj
- Department of Biological and Medical Psychology, University of Bergen, Bergen, Norway
| | - Eirunn Thun
- Department of Clinical Psychology, University of Bergen, Bergen, Norway
| | - Janne Grønli
- Department of Biological and Medical Psychology, University of Bergen, Bergen, Norway
| | - Anette Harris
- Department of Psychosocial Science, University of Bergen, Bergen, Norway
| | - Bjørn Bjorvatn
- Department of Global Public Health and Primary Care, University of Bergen, Bergen, Norway
- Norwegian Competence Center for Sleep Disorders, Haukeland University Hospital, Bergen, Norway
| | - Siri Waage
- Department of Global Public Health and Primary Care, University of Bergen, Bergen, Norway
- Norwegian Competence Center for Sleep Disorders, Haukeland University Hospital, Bergen, Norway
| | - Debra J Skene
- Chronobiology, Faculty of Health and Medical Sciences, University of Surrey, Guildford, United Kingdom
| | - Ståle Pallesen
- Department of Psychosocial Science, University of Bergen, Bergen, Norway
- Norwegian Competence Center for Sleep Disorders, Haukeland University Hospital, Bergen, Norway
- Optentia, North-West University Vaal Triangle Campus, Vanderbijlpark, South Africa
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22
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Stoddard MC, Eyster HN, Hogan BG, Morris DH, Soucy ER, Inouye DW. Wild hummingbirds discriminate nonspectral colors. Proc Natl Acad Sci U S A 2020; 117:15112-15122. [PMID: 32541035 PMCID: PMC7334476 DOI: 10.1073/pnas.1919377117] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Many animals have the potential to discriminate nonspectral colors. For humans, purple is the clearest example of a nonspectral color. It is perceived when two color cone types in the retina (blue and red) with nonadjacent spectral sensitivity curves are predominantly stimulated. Purple is considered nonspectral because no monochromatic light (such as from a rainbow) can evoke this simultaneous stimulation. Except in primates and bees, few behavioral experiments have directly examined nonspectral color discrimination, and little is known about nonspectral color perception in animals with more than three types of color photoreceptors. Birds have four color cone types (compared to three in humans) and might perceive additional nonspectral colors such as UV+red and UV+green. Can birds discriminate nonspectral colors, and are these colors behaviorally and ecologically relevant? Here, using comprehensive behavioral experiments, we show that wild hummingbirds can discriminate a variety of nonspectral colors. We also show that hummingbirds, relative to humans, likely perceive a greater proportion of natural colors as nonspectral. Our analysis of plumage and plant spectra reveals many colors that would be perceived as nonspectral by birds but not by humans: Birds' extra cone type allows them not just to see UV light but also to discriminate additional nonspectral colors. Our results support the idea that birds can distinguish colors throughout tetrachromatic color space and indicate that nonspectral color perception is vital for signaling and foraging. Since tetrachromacy appears to have evolved early in vertebrates, this capacity for rich nonspectral color perception is likely widespread.
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Affiliation(s)
- Mary Caswell Stoddard
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544;
- Rocky Mountain Biological Laboratory, Crested Butte, CO 81224
| | - Harold N Eyster
- Rocky Mountain Biological Laboratory, Crested Butte, CO 81224
- Institute for Resources, Environment and Sustainability, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Benedict G Hogan
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544
- Rocky Mountain Biological Laboratory, Crested Butte, CO 81224
| | - Dylan H Morris
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544
| | - Edward R Soucy
- Center for Brain Science, Harvard University, Cambridge, MA 02138
| | - David W Inouye
- Rocky Mountain Biological Laboratory, Crested Butte, CO 81224
- Department of Biology, University of Maryland, College Park, MD 20742
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23
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Shrestha M, Garcia JE, Burd M, Dyer AG. Australian native flower colours: Does nectar reward drive bee pollinator flower preferences? PLoS One 2020; 15:e0226469. [PMID: 32525873 PMCID: PMC7289428 DOI: 10.1371/journal.pone.0226469] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Accepted: 05/18/2020] [Indexed: 11/18/2022] Open
Abstract
Colour is an important signal that flowering plants use to attract insect pollinators like bees. Previous research in Germany has shown that nectar volume is higher for flower colours that are innately preferred by European bees, suggesting an important link between colour signals, bee preferences and floral rewards. In Australia, flower colour signals have evolved in parallel to the Northern hemisphere to enable easy discrimination and detection by the phylogenetically ancient trichromatic visual system of bees, and native Australian bees also possess similar innate colour preferences to European bees. We measured 59 spectral signatures from flowers present at two preserved native habitats in South Eastern Australia and tested whether there were any significant differences in the frequency of flowers presenting higher nectar rewards depending upon the colour category of the flower signals, as perceived by bees. We also tested if there was a significant correlation between chromatic contrast and the frequency of flowers presenting higher nectar rewards. For the entire sample, and for subsets excluding species in the Asteraceae and Orchidaceae, we found no significant difference among colour categories in the frequency of high nectar reward. This suggests that whilst such relationships between flower colour signals and nectar volume rewards have been observed at a field site in Germany, the effect is likely to be specific at a community level rather than a broad general principle that has resulted in the common signalling of bee flower colours around the world.
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Affiliation(s)
- Mani Shrestha
- Bio-Inspired Digital Lab (BIDS-Lab), Schools of Media and Communication, RMIT University, Melbourne, Australia
| | - Jair E. Garcia
- Bio-Inspired Digital Lab (BIDS-Lab), Schools of Media and Communication, RMIT University, Melbourne, Australia
| | - Martin Burd
- School of Biological Sciences, Monash University, Melbourne, Australia
| | - Adrian G. Dyer
- Bio-Inspired Digital Lab (BIDS-Lab), Schools of Media and Communication, RMIT University, Melbourne, Australia
- * E-mail:
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24
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Donner K, Yovanovich CAM. A frog's eye view: Foundational revelations and future promises. Semin Cell Dev Biol 2020; 106:72-85. [PMID: 32466970 DOI: 10.1016/j.semcdb.2020.05.011] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2020] [Revised: 05/13/2020] [Accepted: 05/13/2020] [Indexed: 12/16/2022]
Abstract
From the mid-19th century until the 1980's, frogs and toads provided important research models for many fundamental questions in visual neuroscience. In the present century, they have been largely neglected. Yet they are animals with highly developed vision, a complex retina built on the basic vertebrate plan, an accessible brain, and an experimentally useful behavioural repertoire. They also offer a rich diversity of species and life histories on a reasonably restricted physiological and evolutionary background. We suggest that important insights may be gained from revisiting classical questions in anurans with state-of-the-art methods. At the input to the system, this especially concerns the molecular evolution of visual pigments and photoreceptors, at the output, the relation between retinal signals, brain processing and behavioural decision-making.
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Affiliation(s)
- Kristian Donner
- Molecular and Integrative Biosciences Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Finland; PB 65 (Viikinkaari 1), 00014, University of Helsinki, Finland.
| | - Carola A M Yovanovich
- Department of Zoology, Institute of Biosciences, University of São Paulo, Brazil; Rua do Matão, Trav. 14, N°101, São Paulo, SP, 05508-090, Brazil.
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25
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Webster MA. The Verriest Lecture: Adventures in blue and yellow. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2020; 37:V1-V14. [PMID: 32400510 PMCID: PMC7233477 DOI: 10.1364/josaa.383625] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Accepted: 12/20/2019] [Indexed: 06/11/2023]
Abstract
Conventional models of color vision assume that blue and yellow (along with red and green) are the fundamental building blocks of color appearance, yet how these hues are represented in the brain and whether and why they might be special are questions that remain shrouded in mystery. Many studies have explored the visual encoding of color categories, from the statistics of the environment to neural processing to perceptual experience. Blue and yellow are tied to salient features of the natural color world, and these features have likely shaped several important aspects of color vision. However, it remains less certain that these dimensions are encoded as primary or "unique" in the visual representation of color. There are also striking differences between blue and yellow percepts that may reflect high-level inferences about the world, specifically about the colors of light and surfaces. Moreover, while the stimuli labeled as blue or yellow or other basic categories show a remarkable degree of constancy within the observer, they all vary independently of one another across observers. This pattern of variation again suggests that blue and yellow and red and green are not a primary or unitary dimension of color appearance, and instead suggests a representation in which different hues reflect qualitatively different categories rather than quantitative differences within an underlying low-dimensional "color space."
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26
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Yilmaz A, Grübel K, Spaethe J, Rössler W. Distributed plasticity in ant visual pathways following colour learning. Proc Biol Sci 2020; 286:20182813. [PMID: 30963920 DOI: 10.1098/rspb.2018.2813] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Abstract
Colour processing at early stages of visual pathways is a topic of intensive study both in vertebrate and invertebrate species. However, it is still unclear how colour learning and memory formation affects an insect brain in the peripheral processing stages and high-order integration centres, and whether associative colour experiences are reflected in plasticity of underlying neuronal circuits. To address this issue, we used Camponotus blandus ants as their proven colour learning and memory capabilities, precisely controllable age and experience, and already known central visual pathways offer unique access to analyse plasticity in neuronal circuits for colour vision in a miniature brain. The potential involvement of distinct neuropils-optic lobes (OLs), mushroom body (MB) input (collar) and output (vertical lobe), anterior optic tubercle (AOTU) and central complex (CX)-in associative colour experiences was assessed by quantification of volumetric and synaptic changes (MB collar) directly after colour conditioning and, 3 days later, after the establishment of long-term memory (LTM). To account for potential effects of non-associative light exposure, we compared neuronal changes in the brain of colour-naive foragers with those of foragers that had been exposed to light in a non-associative way. The results clearly show that the OLs, AOTU, and CX respond with plastic changes after colour learning and LTM formation. This suggests a complex neuronal network for colour learning and memory formation involving multiple brain levels. Such a colour-processing network probably represents an efficient design promoting fast and accurate behavioural decisions during orientation and navigation.
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Affiliation(s)
- Ayse Yilmaz
- Department of Behavioural Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg , Am Hubland, 97074 Würzburg , Germany
| | - Kornelia Grübel
- Department of Behavioural Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg , Am Hubland, 97074 Würzburg , Germany
| | - Johannes Spaethe
- Department of Behavioural Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg , Am Hubland, 97074 Würzburg , Germany
| | - Wolfgang Rössler
- Department of Behavioural Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg , Am Hubland, 97074 Würzburg , Germany
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27
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Abstract
Individual differences are a conspicuous feature of color vision and arise from many sources, in both the observer and the world. These differences have important practical implications for comparing and correcting perception and performance, and important theoretical implications for understanding the design principles underlying color coding. Color percepts within and between individuals often vary less than the variations in spectral sensitivity might predict. This stability is achieved by a variety of processes that compensate perception for the sensitivity limits of the eye and brain. Yet judgments of color between individuals can also vary widely, and in ways that are not readily explained by differences in sensitivity or the environment. These differences are uncorrelated across different color categories, and could reflect how these categories are learned or represented.
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Affiliation(s)
- Kara J Emery
- Graduate Program in Integrative Neuroscience, Department of Psychology, University of Nevada, Reno
| | - Michael A Webster
- Graduate Program in Integrative Neuroscience, Department of Psychology, University of Nevada, Reno
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30
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Siuda-Krzywicka K, Boros M, Bartolomeo P, Witzel C. The biological bases of colour categorisation: From goldfish to the human brain. Cortex 2019; 118:82-106. [DOI: 10.1016/j.cortex.2019.04.010] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Revised: 12/03/2018] [Accepted: 04/12/2019] [Indexed: 01/29/2023]
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Patterson SS, Neitz M, Neitz J. Reconciling Color Vision Models With Midget Ganglion Cell Receptive Fields. Front Neurosci 2019; 13:865. [PMID: 31474825 PMCID: PMC6707431 DOI: 10.3389/fnins.2019.00865] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2019] [Accepted: 08/02/2019] [Indexed: 11/13/2022] Open
Abstract
Midget retinal ganglion cells (RGCs) make up the majority of foveal RGCs in the primate retina. The receptive fields of midget RGCs exhibit both spectral and spatial opponency and are implicated in both color and achromatic form vision, yet the exact mechanisms linking their responses to visual perception remain unclear. Efforts to develop color vision models that accurately predict all the features of human color and form vision based on midget RGCs provide a case study connecting experimental and theoretical neuroscience, drawing on diverse research areas such as anatomy, physiology, psychophysics, and computer vision. Recent technological advances have allowed researchers to test some predictions of color vision models in new and precise ways, producing results that challenge traditional views. Here, we review the progress in developing models of color-coding receptive fields that are consistent with human psychophysics, the biology of the primate visual system and the response properties of midget RGCs.
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Affiliation(s)
- Sara S Patterson
- Department of Ophthalmology, University of Washington, Seattle, WA, United States.,Neuroscience Graduate Program, University of Washington, Seattle, WA, United States
| | - Maureen Neitz
- Department of Ophthalmology, University of Washington, Seattle, WA, United States
| | - Jay Neitz
- Department of Ophthalmology, University of Washington, Seattle, WA, United States
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Abstract
There are four cone morphologies in zebrafish, corresponding to UV (U), blue (B), green (G), and red (R)-sensing types; yet genetically, eight cone opsins are expressed. How eight opsins are physiologically siloed in four cone types is not well understood, and in larvae, cone physiological spectral peaks are unstudied. We use a spectral model to infer cone wavelength peaks, semisaturation irradiances, and saturation amplitudes from electroretinogram (ERG) datasets composed of multi-wavelength, multi-irradiance, aspartate-isolated, cone-PIII signals, as compiled from many 5- to 12-day larvae and 8- to 18-month-old adult eyes isolated from wild-type (WT) or roy orbison (roy) strains. Analysis suggests (in nm) a seven-cone, U-360/B1-427/B2-440/G1-460/G3-476/R1-575/R2-556, spectral physiology in WT larvae but a six-cone, U-349/B1-414/G3-483/G4-495/R1-572/R2-556, structure in WT adults. In roy larvae, there is a five-cone structure: U-373/B2-440/G1-460/R1-575/R2-556; in roy adults, there is a four-cone structure, B1-410/G3-482/R1-571/R2-556. Existence of multiple B, G, and R types is inferred from shifts in peaks with red or blue backgrounds. Cones were either high or low semisaturation types. The more sensitive, low semisaturation types included U, B1, and G1 cones [3.0–3.6 log(quanta·μm−2·s−1)]. The less sensitive, high semisaturation types were B2, G3, G4, R1, and R2 types [4.3-4.7 log(quanta·μm−2·s−1)]. In both WT and roy, U- and B- cone saturation amplitudes were greater in larvae than in adults, while G-cone saturation levels were greater in adults. R-cone saturation amplitudes were the largest (50–60% of maximal dataset amplitudes) and constant throughout development. WT and roy larvae differed in cone signal levels, with lesser UV- and greater G-cone amplitudes occurring in roy, indicating strain variation in physiological development of cone signals. These physiological measures of cone types suggest chromatic processing in zebrafish involves at least four to seven spectral signal processing pools.
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Thoreson WB, Dacey DM. Diverse Cell Types, Circuits, and Mechanisms for Color Vision in the Vertebrate Retina. Physiol Rev 2019; 99:1527-1573. [PMID: 31140374 PMCID: PMC6689740 DOI: 10.1152/physrev.00027.2018] [Citation(s) in RCA: 72] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 03/27/2019] [Accepted: 04/02/2019] [Indexed: 01/13/2023] Open
Abstract
Synaptic interactions to extract information about wavelength, and thus color, begin in the vertebrate retina with three classes of light-sensitive cells: rod photoreceptors at low light levels, multiple types of cone photoreceptors that vary in spectral sensitivity, and intrinsically photosensitive ganglion cells that contain the photopigment melanopsin. When isolated from its neighbors, a photoreceptor confounds photon flux with wavelength and so by itself provides no information about color. The retina has evolved elaborate color opponent circuitry for extracting wavelength information by comparing the activities of different photoreceptor types broadly tuned to different parts of the visible spectrum. We review studies concerning the circuit mechanisms mediating opponent interactions in a range of species, from tetrachromatic fish with diverse color opponent cell types to common dichromatic mammals where cone opponency is restricted to a subset of specialized circuits. Distinct among mammals, primates have reinvented trichromatic color vision using novel strategies to incorporate evolution of an additional photopigment gene into the foveal structure and circuitry that supports high-resolution vision. Color vision is absent at scotopic light levels when only rods are active, but rods interact with cone signals to influence color perception at mesopic light levels. Recent evidence suggests melanopsin-mediated signals, which have been identified as a substrate for setting circadian rhythms, may also influence color perception. We consider circuits that may mediate these interactions. While cone opponency is a relatively simple neural computation, it has been implemented in vertebrates by diverse neural mechanisms that are not yet fully understood.
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Affiliation(s)
- Wallace B Thoreson
- Department of Ophthalmology and Visual Sciences, Truhlsen Eye Institute, University of Nebraska Medical Center , Omaha, Nebraska ; and Department of Biological Structure, Washington National Primate Research Center, University of Washington , Seattle, Washington
| | - Dennis M Dacey
- Department of Ophthalmology and Visual Sciences, Truhlsen Eye Institute, University of Nebraska Medical Center , Omaha, Nebraska ; and Department of Biological Structure, Washington National Primate Research Center, University of Washington , Seattle, Washington
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Shrestha M, Garcia JE, Chua JHJ, Howard SR, Tscheulin T, Dorin A, Nielsen A, Dyer AG. Fluorescent Pan Traps Affect the Capture Rate of Insect Orders in Different Ways. INSECTS 2019; 10:insects10020040. [PMID: 30717089 PMCID: PMC6410105 DOI: 10.3390/insects10020040] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 01/15/2019] [Accepted: 01/21/2019] [Indexed: 11/16/2022]
Abstract
To monitor and quantify the changes in pollinator communities over time, it is important to have robust survey techniques of insect populations. Pan traps allow for the assessment of the relative insect abundance in an environment and have been promoted by the Food and Agricultural Organization (FAO) as an efficient data collection methodology. It has been proposed that fluorescent pan traps are particularly useful, as it has been suggested that they capture high numbers of insects in an unbiased fashion. We use a simultaneous presentation of fluorescent and non-fluorescent pan trap colours to assess how flower-visiting insects of different orders respond to visual stimuli and reveal a significant interaction between trap fluorescence and captured insect type. In particular, Coleoptera (beetles) and Lepidoptera (butterflies and moths) were captured significantly more frequently by fluorescent traps, whilst Dipterans (flies) were captured significantly less frequently by this type of pan trap. Hymenopterans (bees and wasps) showed no significant difference in their preference for fluorescent or non-fluorescent traps. Our results reveal that the use of fluorescent pan traps may differently bias insect capture rates when compared to the typical experience of colour flower-visiting insects in natural environments. Correction factors may, therefore, be required for interpreting insect pan trap data collected with different methodologies.
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Affiliation(s)
- Mani Shrestha
- School of Media and Communication, RMIT University, Melbourne, VIC 3001, Australia.
- Faculty of Information Technology, Monash University, Melbourne, VIC 3800, Australia.
| | - Jair E Garcia
- School of Media and Communication, RMIT University, Melbourne, VIC 3001, Australia
| | - Justin H J Chua
- School of Media and Communication, RMIT University, Melbourne, VIC 3001, Australia
| | - Scarlett R Howard
- School of Media and Communication, RMIT University, Melbourne, VIC 3001, Australia
| | - Thomas Tscheulin
- Laboratory of Biogeography and Ecology, Department of Geography, University of the Aegean University Hill, GR-81100 Mytilene, Greece
| | - Alan Dorin
- Faculty of Information Technology, Monash University, Melbourne, VIC 3800, Australia
| | - Anders Nielsen
- Centre for Ecological and Evolutionary Synthesis (CEES), Dept. of Biosciences, University of Oslo, P.O. Box 1066 Blindern, 0316 Oslo, Norway
| | - Adrian G Dyer
- School of Media and Communication, RMIT University, Melbourne, VIC 3001, Australia
- Department of Physiology, Monash University, Melbourne, VIC 3800, Australia
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Stoddard MC, Miller AE, Eyster HN, Akkaynak D. I see your false colours: how artificial stimuli appear to different animal viewers. Interface Focus 2018; 9:20180053. [PMID: 30603072 DOI: 10.1098/rsfs.2018.0053] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/15/2018] [Indexed: 01/14/2023] Open
Abstract
The use of artificially coloured stimuli, especially to test hypotheses about sexual selection and anti-predator defence, has been common in behavioural ecology since the pioneering work of Tinbergen. To investigate the effects of colour on animal behaviour, many researchers use paints, markers and dyes to modify existing colours or to add colour to synthetic models. Because colour perception varies widely across species, it is critical to account for the signal receiver's vision when performing colour manipulations. To explore this, we applied 26 typical coloration products to different types of avian feathers. Next, we measured the artificially coloured feathers using two complementary techniques-spectrophotometry and digital ultraviolet--visible photography-and modelled their appearance to mammalian dichromats (ferret, dog), trichromats (honeybee, human) and avian tetrachromats (hummingbird, blue tit). Overall, artificial colours can have dramatic and sometimes unexpected effects on the reflectance properties of feathers, often differing based on feather type. The degree to which an artificial colour differs from the original colour greatly depends on an animal's visual system. 'White' paint to a human is not 'white' to a honeybee or blue tit. Based on our analysis, we offer practical guidelines for reducing the risk of introducing unintended effects when using artificial colours in behavioural experiments.
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Affiliation(s)
- Mary Caswell Stoddard
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
| | - Audrey E Miller
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
| | - Harold N Eyster
- Institute for Resources, Environment and Sustainability, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4
| | - Derya Akkaynak
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
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