On sampled-data control for stabilization of genetic regulatory networks with leakage delays

Bifurcation and Oscillatory Dynamics of Delayed Cyclic Gene Networks Including Small RNAs

It has been demonstrated in a large number of experimental results that small RNAs (sRNAs) play a vital role in gene regulation processes. Thus, the gene regulation process is dominated by sRNAs in addition to messenger RNAs and proteins. However, the regulation mechanism of sRNAs is not well understood and there are few models considering the effect of sRNAs. So it is of realistic biological background to include sRNAs when modeling gene networks. In this paper, sRNAs are incorporated into the process of gene expression and a new differential equation model is put forward to describe cyclic genetic regulatory networks with sRNAs and multiple delays. We mainly investigate the stability and bifurcation criteria for two cases: 1) positive cyclic genetic regulatory networks and 2) negative cyclic genetic regulatory networks. For a positive cyclic genetic regulatory network, it is revealed that there may exist more than one equilibrium and the multistability can appear. Sufficient conditions are established for the delay-independent stability and fold bifurcations. It is found that the dynamics of positive cyclic gene networks has no bearing on time delays, but depends on the biochemical parameters, the Hill coefficient and the equilibrium itself. For a negative cyclic genetic regulatory network, it is proved that there exists a unique equilibrium. Delay-dependent conditions for the stability are derived, and the existence of Hopf bifurcations is examined. Different from the delay-independent stability of positive gain networks, the stability of equilibrium is determined not only by the biochemical parameters, the Hill coefficient and the equilibrium itself, but also by the total delay. At last, three illustrative examples are provided to validate the major results.

Sampled-Data Control for the Synchronization of Boolean Control Networks

In this paper, we investigate the sampled-data state feedback control (SDSFC) for the synchronization of Boolean control networks (BCNs) under the configuration of drive-response coupling. Necessary and sufficient conditions for the complete synchronization of BCNs are obtained by the algebraic representations of logical dynamics. Based on the analysis of the sampling periods, we establish an algorithm to guarantee the synchronization of drive-response coupled BCNs by SDSFC. An example is given to illustrate the significance of the obtained results.

Robust Gene Circuit Control Design for Time-Delayed Genetic Regulatory Networks Without SUM Regulatory Logic

This paper investigates the gene circuit control design problem of time-delayed genetic regulatory networks. In the genetic regulatory networks, the time delays are unknown constants, and the genetic regulatory is not conventional SUM regulatory logic and can be modeled to be an unknown nonlinear function of the time-delayed states of the other genes in a cell. By Lyapunov stability, a novel adaptive gene circuit control design approach is proposed for the genetic regulatory networks, where the unknown time delays are estimated online by adaptive algorithms and the unknown regulatory functions are approximated by neural networks. The design approach in this paper is delay-dependent and has less conservatism than the delay-independent approach. From theoretical analysis, the closed-loop system is asymptotically stable and all the signals in the system converge to an adjustable neighborhood of the origin. Finally, a numerical example is given to show the effectiveness of the new design approach.

Reduced- and Full-Order Observers for Delayed Genetic Regulatory Networks

This paper is centered upon the state estimation for delayed genetic regulatory networks. Our aim is at estimating the concentrations of mRNAs and proteins by designing reduced-order and full-order state observers based on available network outputs. We introduce a Lyapunov-Krasovskii functional including quadruplicate integrals, and estimate its derivative by employing the Wirtinger-type integral inequalities, reciprocal convex technique, and convex technique. From which, delay-dependent sufficient conditions, in the form of linear matrix inequalities (LMIs), are investigated to ensure that the resultant error system is asymptotically stable. One can verify these conditions by utilizing the MATLAB Toolboxes LMI or YALMIP. In addition, the gains of reduced-order and full-order observers are represented by the feasible solutions of the LMIs, and thereby, the concrete expressions of the desired reduced-order and full-order state observers are presented. Finally, the simulation results of a numerical example are demonstrated, which explains the validity of the proposed method.

Sampled-Data Stabilization for Fuzzy Genetic Regulatory Networks with Leakage Delays

This paper deals with the sampled-data stabilization problem for Takagi-Sugeno (T-S) fuzzy genetic regulatory networks with leakage delays. A novel Lyapunov-Krasovskii functional (LKF) is established by the non-uniform division of the delay intervals with triplex and quadruplex integral terms. Using such LKFs for constant and time-varying delay cases, new stability conditions are obtained in the T-S fuzzy framework. Based on this, a new condition for the sampled-data controller design is proposed using a linear matrix inequality representation. A numerical result is provided to show the effectiveness and potential of the developed design method.

Finite-Time Stability Analysis of Reaction-Diffusion Genetic Regulatory Networks with Time-Varying Delays

This paper is concerned with the finite-time stability problem of the delayed genetic regulatory networks (GRNs) with reaction-diffusion terms under Dirichlet boundary conditions. By constructing a Lyapunov-Krasovskii functional including quad-slope integrations, we establish delay-dependent finite-time stability criteria by employing the Wirtinger-type integral inequality, Gronwall inequality, convex technique, and reciprocally convex technique. In addition, the obtained criteria are also reaction-diffusion-dependent. Finally, a numerical example is provided to illustrate the effectiveness of the theoretical results.

New delay-interval-dependent stability criteria for switched Hopfield neural networks of neutral type with successive time-varying delay components

This paper deals with the problem of delay-interval-dependent stability criteria for switched Hopfield neural networks of neutral type with successive time-varying delay components. A novel Lyapunov-Krasovskii (L-K) functionals with triple integral terms which involves more information on the state vectors of the neural networks and upper bound of the successive time-varying delays is constructed. By using the famous Jensen's inequality, Wirtinger double integral inequality, introducing of some zero equations and using the reciprocal convex combination technique and Finsler's lemma, a novel delay-interval dependent stability criterion is derived in terms of linear matrix inequalities, which can be efficiently solved via standard numerical software. Moreover, it is also assumed that the lower bound of the successive leakage and discrete time-varying delays is not restricted to be zero. In addition, the obtained condition shows potential advantages over the existing ones since no useful term is ignored throughout the estimate of upper bound of the derivative of L-K functional. Using several examples, it is shown that the proposed stabilization theorem is asymptotically stable. Finally, illustrative examples are presented to demonstrate the effectiveness and usefulness of the proposed approach with a four-tank benchmark real-world problem.