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Kim SY, Lim W. Effect of interpopulation spike-timing-dependent plasticity on synchronized rhythms in neuronal networks with inhibitory and excitatory populations. Cogn Neurodyn 2020; 14:535-567. [PMID: 32655716 DOI: 10.1007/s11571-020-09580-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2019] [Revised: 02/11/2020] [Accepted: 03/06/2020] [Indexed: 02/07/2023] Open
Abstract
We consider a two-population network consisting of both inhibitory (I) interneurons and excitatory (E) pyramidal cells. This I-E neuronal network has adaptive dynamic I to E and E to I interpopulation synaptic strengths, governed by interpopulation spike-timing-dependent plasticity (STDP). In previous works without STDPs, fast sparsely synchronized rhythms, related to diverse cognitive functions, were found to appear in a range of noise intensity D for static synaptic strengths. Here, by varying D, we investigate the effect of interpopulation STDPs on fast sparsely synchronized rhythms that emerge in both the I- and the E-populations. Depending on values of D, long-term potentiation (LTP) and long-term depression (LTD) for population-averaged values of saturated interpopulation synaptic strengths are found to occur. Then, the degree of fast sparse synchronization varies due to effects of LTP and LTD. In a broad region of intermediate D, the degree of good synchronization (with higher synchronization degree) becomes decreased, while in a region of large D, the degree of bad synchronization (with lower synchronization degree) gets increased. Consequently, in each I- or E-population, the synchronization degree becomes nearly the same in a wide range of D (including both the intermediate and the large D regions). This kind of "equalization effect" is found to occur via cooperative interplay between the average occupation and pacing degrees of spikes (i.e., the average fraction of firing neurons and the average degree of phase coherence between spikes in each synchronized stripe of spikes in the raster plot of spikes) in fast sparsely synchronized rhythms. Finally, emergences of LTP and LTD of interpopulation synaptic strengths (leading to occurrence of equalization effect) are intensively investigated via a microscopic method based on the distributions of time delays between the pre- and the post-synaptic spike times.
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Affiliation(s)
- Sang-Yoon Kim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu, 42411 Korea
| | - Woochang Lim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu, 42411 Korea
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Curto C, Morrison K. Relating network connectivity to dynamics: opportunities and challenges for theoretical neuroscience. Curr Opin Neurobiol 2019; 58:11-20. [PMID: 31319287 DOI: 10.1016/j.conb.2019.06.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Accepted: 06/22/2019] [Indexed: 11/29/2022]
Abstract
We review recent work relating network connectivity to the dynamics of neural activity. While concepts stemming from network science provide a valuable starting point, the interpretation of graph-theoretic structures and measures can be highly dependent on the dynamics associated to the network. Properties that are quite meaningful for linear dynamics, such as random walk and network flow models, may be of limited relevance in the neuroscience setting. Theoretical and computational neuroscience are playing a vital role in understanding the relationship between network connectivity and the nonlinear dynamics associated to neural networks.
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Affiliation(s)
- Carina Curto
- The Pennsylvania State University, PA 16802, United States.
| | - Katherine Morrison
- School of Mathematical Sciences, University of Northern Colorado, Greeley, CO 80639, USA
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Cluster burst synchronization in a scale-free network of inhibitory bursting neurons. Cogn Neurodyn 2019; 14:69-94. [PMID: 32015768 DOI: 10.1007/s11571-019-09546-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Revised: 06/03/2019] [Accepted: 07/01/2019] [Indexed: 10/26/2022] Open
Abstract
We consider a scale-free network of inhibitory Hindmarsh-Rose (HR) bursting neurons, and make a computational study on coupling-induced cluster burst synchronization by varying the average coupling strength J 0 . For sufficiently small J 0 , non-cluster desynchronized states exist. However, when passing a critical point J c ∗ ( ≃ 0.16 ) , the whole population is segregated into 3 clusters via a constructive role of synaptic inhibition to stimulate dynamical clustering between individual burstings, and thus 3-cluster desynchronized states appear. As J 0 is further increased and passes a lower threshold J l ∗ ( ≃ 0.78 ) , a transition to 3-cluster burst synchronization occurs due to another constructive role of synaptic inhibition to favor population synchronization. In this case, HR neurons in each cluster make burstings every 3rd cycle of the instantaneous burst rate R w ( t ) of the whole population, and exhibit burst synchronization. However, as J 0 passes an intermediate threshold J m ∗ ( ≃ 5.2 ) , HR neurons fire burstings intermittently at a 4th cycle of R w ( t ) via burst skipping rather than at its 3rd cycle, and hence they begin to make intermittent hoppings between the 3 clusters. Due to such intermittent intercluster hoppings via burst skippings, the 3 clusters become broken up (i.e., the 3 clusters are integrated into a single one). However, in spite of such break-up (i.e., disappearance) of the 3-cluster states, (non-cluster) burst synchronization persists in the whole population, which is well visualized in the raster plot of burst onset times where bursting stripes (composed of burst onset times and indicating burst synchronization) appear successively. With further increase in J 0 , intercluster hoppings are intensified, and bursting stripes also become dispersed more and more due to a destructive role of synaptic inhibition to spoil the burst synchronization. Eventually, when passing a higher threshold J h ∗ ( ≃ 17.8 ) a transition to desynchronization occurs via complete overlap between the bursting stripes. Finally, we also investigate the effects of stochastic noise on both 3-cluster burst synchronization and intercluster hoppings.
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Huet A, Batrel C, Wang J, Desmadryl G, Nouvian R, Puel JL, Bourien J. Sound Coding in the Auditory Nerve: From Single Fiber Activity to Cochlear Mass Potentials in Gerbils. Neuroscience 2018; 407:83-92. [PMID: 30342201 DOI: 10.1016/j.neuroscience.2018.10.010] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2018] [Revised: 10/01/2018] [Accepted: 10/08/2018] [Indexed: 12/21/2022]
Abstract
Auditory nerve fibers (ANFs) convey acoustic information from the sensory cells to the brainstem using an elaborated neural code based on both spike timing and rate. As the stimulus tone frequency increases, time coding fades and ceases, resulting in high-frequency tone encoding that relies mostly on the spike discharge rate. Here, we recapitulated our recent single-unit data from gerbil's auditory nerve to highlight the most relevant mode of coding (spike timing versus spike rate) in tone-in-noise. We report that high-spontaneous rate (SR) fibers driven by low-frequency tones in noise are able to phase lock ∼30 dB below the level that evoked a significant elevation of the discharge rate, whereas medium- and low-SR fibers switch their preferential mode of coding from rate coding in quiet, to time coding in noise. For high-frequency tone, the low-threshold/high-SR fibers reach their maximum discharge rate in noise and do not respond to tones, whereas medium- and low-SR fibers are still able to respond to tones making them more resistant to background noise. Based on these findings, we first discuss the ecological function of the ANF distribution according to their spontaneous discharge rate. Then, we point out the poor synchronization of the low-SR ANFs, accounting for the discrepancy between ANF number and the amplitude of the compound action potential of the of the auditory nerve. Finally, we proposed a new diagnostic tool to assess low-SR fibers, which does not rely on the onset response of the ANFs.
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Affiliation(s)
- A Huet
- INM, Inserm, Univ Montpellier, Montpellier, France
| | - C Batrel
- INM, Inserm, Univ Montpellier, Montpellier, France
| | - J Wang
- INM, Inserm, Univ Montpellier, Montpellier, France
| | - G Desmadryl
- INM, Inserm, Univ Montpellier, Montpellier, France
| | - R Nouvian
- INM, Inserm, Univ Montpellier, Montpellier, France
| | - J L Puel
- INM, Inserm, Univ Montpellier, Montpellier, France.
| | - J Bourien
- INM, Inserm, Univ Montpellier, Montpellier, France
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Kim SY, Lim W. Burst synchronization in a scale-free neuronal network with inhibitory spike-timing-dependent plasticity. Cogn Neurodyn 2018; 13:53-73. [PMID: 30728871 DOI: 10.1007/s11571-018-9505-1] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Revised: 08/19/2018] [Accepted: 08/28/2018] [Indexed: 01/09/2023] Open
Abstract
We are concerned about burst synchronization (BS), related to neural information processes in health and disease, in the Barabási-Albert scale-free network (SFN) composed of inhibitory bursting Hindmarsh-Rose neurons. This inhibitory neuronal population has adaptive dynamic synaptic strengths governed by the inhibitory spike-timing-dependent plasticity (iSTDP). In previous works without considering iSTDP, BS was found to appear in a range of noise intensities for fixed synaptic inhibition strengths. In contrast, in our present work, we take into consideration iSTDP and investigate its effect on BS by varying the noise intensity. Our new main result is to find occurrence of a Matthew effect in inhibitory synaptic plasticity: good BS gets better via LTD, while bad BS get worse via LTP. This kind of Matthew effect in inhibitory synaptic plasticity is in contrast to that in excitatory synaptic plasticity where good (bad) synchronization gets better (worse) via LTP (LTD). We note that, due to inhibition, the roles of LTD and LTP in inhibitory synaptic plasticity are reversed in comparison with those in excitatory synaptic plasticity. Moreover, emergences of LTD and LTP of synaptic inhibition strengths are intensively investigated via a microscopic method based on the distributions of time delays between the pre- and the post-synaptic burst onset times. Finally, in the presence of iSTDP we investigate the effects of network architecture on BS by varying the symmetric attachment degree l ∗ and the asymmetry parameter Δ l in the SFN.
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Affiliation(s)
- Sang-Yoon Kim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu, 42411 Korea
| | - Woochang Lim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu, 42411 Korea
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Neural electrical activity and neural network growth. Neural Netw 2018; 101:15-24. [PMID: 29475142 DOI: 10.1016/j.neunet.2018.02.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2017] [Revised: 01/31/2018] [Accepted: 02/01/2018] [Indexed: 01/19/2023]
Abstract
The development of central and peripheral neural system depends in part on the emergence of the correct functional connectivity in its input and output pathways. Now it is generally accepted that molecular factors guide neurons to establish a primary scaffold that undergoes activity-dependent refinement for building a fully functional circuit. However, a number of experimental results obtained recently shows that the neuronal electrical activity plays an important role in the establishing of initial interneuronal connections. Nevertheless, these processes are rather difficult to study experimentally, due to the absence of theoretical description and quantitative parameters for estimation of the neuronal activity influence on growth in neural networks. In this work we propose a general framework for a theoretical description of the activity-dependent neural network growth. The theoretical description incorporates a closed-loop growth model in which the neural activity can affect neurite outgrowth, which in turn can affect neural activity. We carried out the detailed quantitative analysis of spatiotemporal activity patterns and studied the relationship between individual cells and the network as a whole to explore the relationship between developing connectivity and activity patterns. The model, developed in this work will allow us to develop new experimental techniques for studying and quantifying the influence of the neuronal activity on growth processes in neural networks and may lead to a novel techniques for constructing large-scale neural networks by self-organization.
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Effect of spike-timing-dependent plasticity on stochastic burst synchronization in a scale-free neuronal network. Cogn Neurodyn 2018; 12:315-342. [PMID: 29765480 DOI: 10.1007/s11571-017-9470-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2017] [Revised: 11/29/2017] [Accepted: 12/26/2017] [Indexed: 01/02/2023] Open
Abstract
We consider an excitatory population of subthreshold Izhikevich neurons which cannot fire spontaneously without noise. As the coupling strength passes a threshold, individual neurons exhibit noise-induced burstings. This neuronal population has adaptive dynamic synaptic strengths governed by the spike-timing-dependent plasticity (STDP). However, STDP was not considered in previous works on stochastic burst synchronization (SBS) between noise-induced burstings of sub-threshold neurons. Here, we study the effect of additive STDP on SBS by varying the noise intensity D in the Barabási-Albert scale-free network (SFN). One of our main findings is a Matthew effect in synaptic plasticity which occurs due to a positive feedback process. Good burst synchronization (with higher bursting measure) gets better via long-term potentiation (LTP) of synaptic strengths, while bad burst synchronization (with lower bursting measure) gets worse via long-term depression (LTD). Consequently, a step-like rapid transition to SBS occurs by changing D, in contrast to a relatively smooth transition in the absence of STDP. We also investigate the effects of network architecture on SBS by varying the symmetric attachment degree [Formula: see text] and the asymmetry parameter [Formula: see text] in the SFN, and Matthew effects are also found to occur by varying [Formula: see text] and [Formula: see text]. Furthermore, emergences of LTP and LTD of synaptic strengths are investigated in details via our own microscopic methods based on both the distributions of time delays between the burst onset times of the pre- and the post-synaptic neurons and the pair-correlations between the pre- and the post-synaptic instantaneous individual burst rates (IIBRs). Finally, a multiplicative STDP case (depending on states) with soft bounds is also investigated in comparison with the additive STDP case (independent of states) with hard bounds. Due to the soft bounds, a Matthew effect with some quantitative differences is also found to occur for the case of multiplicative STDP.
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Abstract
This article presents a review of recent advances in neuroscience research in the specific area of brain connectivity as a potential biomarker of Alzheimer's disease with a focus on the application of graph theory. The review will begin with a brief overview of connectivity and graph theory. Then resent advances in connectivity as a biomarker for Alzheimer's disease will be presented and analyzed.
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Affiliation(s)
- Jon delEtoile
- 1 Biophysics Graduate Program, The Ohio State University, Columbus, OH, USA
| | - Hojjat Adeli
- 2 Departments of Biomedical Engineering, Biomedical Informatics, Neurological Surgery, and Neuroscience, and Biophysics Graduate Program, The Ohio State University, Columbus, OH, USA
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Çakir Y. Modeling of synchronization behavior of bursting neurons at nonlinearly coupled dynamical networks. NETWORK (BRISTOL, ENGLAND) 2016; 27:289-305. [PMID: 27830974 DOI: 10.1080/0954898x.2016.1249981] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Synchronization behaviors of bursting neurons coupled through electrical and dynamic chemical synapses are investigated. The Izhikevich model is used with random and small world network of bursting neurons. Various currents which consist of diffusive electrical and time-delayed dynamic chemical synapses are used in the simulations to investigate the influences of synaptic currents and couplings on synchronization behavior of bursting neurons. The effects of parameters, such as time delay, inhibitory synaptic strengths, and decay time on synchronization behavior are investigated. It is observed that in random networks with no delay, bursting synchrony is established with the electrical synapse alone, single spiking synchrony is observed with hybrid coupling. In small world network with no delay, periodic bursting behavior with multiple spikes is observed when only chemical and only electrical synapse exist. Single-spike and multiple-spike bursting are established with hybrid couplings. A decrease in the synchronization measure is observed with zero time delay, as the decay time is increased in random network. For synaptic delays which are above active phase period, synchronization measure increases with an increase in synaptic strength and time delay in small world network. However, in random network, it increases with only an increase in synaptic strength.
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Affiliation(s)
- Yüksel Çakir
- a Department of Electronics and Communications , Faculty of Electrical and Electronics Engineering, Istanbul Technical University , Istanbul , Turkey
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