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Mason K, Maurino-Alperovich F, Holder D, Aristovich K. Noise-based correction for electrical impedance tomography. Physiol Meas 2024; 45:065002. [PMID: 38772395 DOI: 10.1088/1361-6579/ad4e93] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Accepted: 05/21/2024] [Indexed: 05/23/2024]
Abstract
Objective.Noisy measurements frequently cause noisy and inaccurate images in impedance imaging. No post-processing technique exists to calculate the propagation of measurement noise and use this to suppress noise in the image. The objectives of this work were (1) to develop a post-processing method for noise-based correction (NBC) in impedance tomography, (2) to test whether NBC improves image quality in electrical impedance tomography (EIT), (3) to determine whether it is preferable to use correlated or uncorrelated noise for NBC, (4) to test whether NBC works within vivodata and (5) to test whether NBC is stable across model and perturbation geometries.Approach.EIT was performedin silicoin a 2D homogeneous circular domain and an anatomically realistic, heterogeneous 3D human head domain for four perturbations and 25 noise levels in each case. This was validated by performing EIT for four perturbations in a circular, saline tank in 2D as well as a human head-shaped saline tank with a realistic skull-like layer in 3D. Images were assessed on the error in the weighted spatial variance (WSV) with respect to the true, target image. The effect of NBC was also tested forin vivoEIT data of lung ventilation in a human thorax and cortical activity in a rat brain.Main results.On visual inspection, NBC maintained or increased image quality for all perturbations and noise levels in 2D and 3D, both experimentally andin silico. Analysis of the WSV showed that NBC significantly improved the WSV in nearly all cases. When the WSV was inferior with NBC, this was either visually imperceptible or a transformation between noisy reconstructions. Forin vivodata, NBC improved image quality in all cases and preserved the expected shape of the reconstructed perturbation.Significance.In practice, uncorrelated NBC performed better than correlated NBC and is recommended as a general-use post-processing technique in EIT.
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Affiliation(s)
- Kai Mason
- Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
| | | | - David Holder
- Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
| | - Kirill Aristovich
- Department of Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
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2
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Mason K, Aristovich K, Holder D. Non-invasive imaging of neural activity with magnetic detection electrical impedance tomography (MDEIT): a modelling study. Physiol Meas 2023; 44:114003. [PMID: 37832564 DOI: 10.1088/1361-6579/ad0358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Accepted: 10/13/2023] [Indexed: 10/15/2023]
Abstract
Objectives.(1) Develop a computational pipeline for three-dimensional fast neural magnetic detection electrical impedance tomography (MDEIT), (2) determine whether constant current or constant voltage is preferable for MDEIT, (3) perform reconstructions of simulated neural activity in a human head model with realistic noise and compare MDEIT to EIT and (4) perform a two-dimensional study in a saline tank for MDEIT with optically pumped magnetometers (OPMs) and compare reconstruction algorithms.Approach.Forward modelling and image reconstruction were performed with a realistic model of a human head in three dimensions and at three noise levels for four perturbations representing neural activity. Images were compared using the error in the position and size of the reconstructed perturbations. Two-dimensional MDEIT was performed in a saline tank with a resistive perturbation and one OPM. Six reconstruction algorithms were compared using the error in the position and size of the reconstructed perturbations.Main results.A computational pipeline was developed in COMSOL Multiphysics, reducing the Jacobian calculation time from months to days. MDEIT reconstructed images with a lower reconstruction error than EIT with a mean difference of 7.0%, 5.5% and 11% for three noise cases representing current noise, reduced current source noise and reduced current source and magnetometer noise. A rank analysis concluded that the MDEIT Jacobian was less rank-deficient than the EIT Jacobian. Reconstructions of a phantom in a saline tank had a best reconstruction error of 13%, achieved using 0th-order Tikhonov regularisation with simulated noise-based correction.Significance.This study demonstrated that three-dimensional MDEIT for neural imaging is feasible and that MDEIT reconstructed superior images to EIT, which can be explained by the lesser rank deficiency of the MDEIT Jacobian. Reconstructions of a perturbation in a saline tank demonstrated a proof of principle for two-dimensional MDEIT with OPMs and identified the best reconstruction algorithm.
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Affiliation(s)
- Kai Mason
- Dept. of Medical Physics and Biomedical Engineering, University College London, Gower St, London, United Kingdom
| | - Kirill Aristovich
- Dept. of Medical Physics and Biomedical Engineering, University College London, Gower St, London, United Kingdom
| | - David Holder
- Dept. of Medical Physics and Biomedical Engineering, University College London, Gower St, London, United Kingdom
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Zhang T, Tian X, Liu X, Ye J, Fu F, Shi X, Liu R, Xu C. Advances of deep learning in electrical impedance tomography image reconstruction. Front Bioeng Biotechnol 2022; 10:1019531. [PMID: 36588934 PMCID: PMC9794741 DOI: 10.3389/fbioe.2022.1019531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 12/02/2022] [Indexed: 12/15/2022] Open
Abstract
Electrical impedance tomography (EIT) has been widely used in biomedical research because of its advantages of real-time imaging and nature of being non-invasive and radiation-free. Additionally, it can reconstruct the distribution or changes in electrical properties in the sensing area. Recently, with the significant advancements in the use of deep learning in intelligent medical imaging, EIT image reconstruction based on deep learning has received considerable attention. This study introduces the basic principles of EIT and summarizes the application progress of deep learning in EIT image reconstruction with regards to three aspects: a single network reconstruction, deep learning combined with traditional algorithm reconstruction, and multiple network hybrid reconstruction. In future, optimizing the datasets may be the main challenge in applying deep learning for EIT image reconstruction. Adopting a better network structure, focusing on the joint reconstruction of EIT and traditional algorithms, and using multimodal deep learning-based EIT may be the solution to existing problems. In general, deep learning offers a fresh approach for improving the performance of EIT image reconstruction and could be the foundation for building an intelligent integrated EIT diagnostic system in the future.
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Affiliation(s)
- Tao Zhang
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China,Drug and Instrument Supervision and Inspection Station, Xining Joint Logistics Support Center, Lanzhou, China
| | - Xiang Tian
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - XueChao Liu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - JianAn Ye
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - Feng Fu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - XueTao Shi
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - RuiGang Liu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - CanHua Xu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China,*Correspondence: CanHua Xu,
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Tarotin I, Mastitskaya S, Ravagli E, Perkins JD, Holder D, Aristovich K. Overcoming temporal dispersion for measurement of activity-related impedance changes in unmyelinated nerves. J Neural Eng 2022; 19. [PMID: 35413701 DOI: 10.1088/1741-2552/ac669a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2022] [Accepted: 04/11/2022] [Indexed: 11/11/2022]
Abstract
Objective.Fast neural electrical impedance tomography is an imaging technique that has been successful in visualising electrically evoked activity of myelinated fibres in peripheral nerves by measurement of the impedance changes (dZ) accompanying excitation. However, imaging of unmyelinated fibres is challenging due to temporal dispersion (TP) which occurs due to variability in conduction velocities of the fibres and leads to a decrease of the signal below the noise with distance from the stimulus. To overcome TP and allow electrical impedance tomography imaging in unmyelinated nerves, a new experimental and signal processing paradigm is required allowing dZ measurement further from the site of stimulation than compound neural activity is visible. The development of such a paradigm was the main objective of this study.Approach.A finite element-based statistical model of TP in porcine subdiaphragmatic nerve was developed and experimentally validatedex-vivo. Two paradigms for nerve stimulation and processing of the resulting data-continuous stimulation and trains of stimuli, were implemented; the optimal paradigm for recording dispersed dZ in unmyelinated nerves was determined.Main results.While continuous stimulation and coherent spikes averaging led to higher signal-to-noise ratios (SNRs) at close distances from the stimulus, stimulation by trains was more consistent across distances and allowed dZ measurement at up to 15 cm from the stimulus (SNR = 1.8 ± 0.8) if averaged for 30 min.Significance.The study develops a method that for the first time allows measurement of dZ in unmyelinated nerves in simulation and experiment, at the distances where compound action potentials are fully dispersed.
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Affiliation(s)
- Ilya Tarotin
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, London WC1E 6BT, United Kingdom
| | - Svetlana Mastitskaya
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, London WC1E 6BT, United Kingdom
| | - Enrico Ravagli
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, London WC1E 6BT, United Kingdom
| | - Justin D Perkins
- Clinical Science and Services, Royal Veterinary College, Hawkshead Lane, Hatfield, United Kingdom
| | - David Holder
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, London WC1E 6BT, United Kingdom
| | - Kirill Aristovich
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, London WC1E 6BT, United Kingdom
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Ke XY, Hou W, Huang Q, Hou X, Bao XY, Kong WX, Li CX, Qiu YQ, Hu SY, Dong LH. Advances in electrical impedance tomography-based brain imaging. Mil Med Res 2022; 9:10. [PMID: 35227324 PMCID: PMC8883715 DOI: 10.1186/s40779-022-00370-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Accepted: 02/08/2022] [Indexed: 11/10/2022] Open
Abstract
Novel advances in the field of brain imaging have enabled the unprecedented clinical application of various imaging modalities to facilitate disease diagnosis and treatment. Electrical impedance tomography (EIT) is a functional imaging technique that measures the transfer impedances between electrodes on the body surface to estimate the spatial distribution of electrical properties of tissues. EIT offers many advantages over other neuroimaging technologies, which has led to its potential clinical use. This qualitative review provides an overview of the basic principles, algorithms, and system composition of EIT. Recent advances in the field of EIT are discussed in the context of epilepsy, stroke, brain injuries and edema, and other brain diseases. Further, we summarize factors limiting the development of brain EIT and highlight prospects for the field. In epilepsy imaging, there have been advances in EIT imaging depth, from cortical to subcortical regions. In stroke research, a bedside EIT stroke monitoring system has been developed for clinical practice, and data support the role of EIT in multi-modal imaging for diagnosing stroke. Additionally, EIT has been applied to monitor the changes in brain water content associated with cerebral edema, enabling the early identification of brain edema and the evaluation of mannitol dehydration. However, anatomically realistic geometry, inhomogeneity, cranium completeness, anisotropy and skull type, etc., must be considered to improve the accuracy of EIT modeling. Thus, the further establishment of EIT as a mature and routine diagnostic technique will necessitate the accumulation of more supporting evidence.
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Affiliation(s)
- Xi-Yang Ke
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China.,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China
| | - Wei Hou
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China.,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China
| | - Qi Huang
- CAS Key Laboratory of Bio-Medical Diagnostics, Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Sciences, Suzhou, 215163, Jiangsu, China
| | - Xue Hou
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China.,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China
| | - Xue-Ying Bao
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China.,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China
| | - Wei-Xuan Kong
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China
| | - Cheng-Xiang Li
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China.,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China
| | - Yu-Qi Qiu
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China.,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China.,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China
| | - Si-Yi Hu
- CAS Key Laboratory of Bio-Medical Diagnostics, Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Sciences, Suzhou, 215163, Jiangsu, China.
| | - Li-Hua Dong
- Department of Radiation Oncology and Therapy, The First Hospital of Jilin University, 130021, Changchun, China. .,Jilin Provincial Key Laboratory of Radiation Oncology and Therapy, The First Hospital of Jilin University, Changchun, 130021, China. .,NHC Key Laboratory of Radiobiology, School of Public Health, Jilin University, Changchun, 130021, China.
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6
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Hannan S, Aristovich K, Faulkner M, Avery J, Walker MC, Holder DS. Imaging slow brain activity during neocortical and hippocampal epileptiform events with electrical impedance tomography. Physiol Meas 2021; 42:014001. [PMID: 33361567 DOI: 10.1088/1361-6579/abd67a] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
OBJECTIVE Electrical impedance tomography (EIT) is an imaging technique that produces tomographic images of internal impedance changes within an object using surface electrodes. It can be used to image the slow increase in cerebral tissue impedance that occurs over seconds during epileptic seizures, which is attributed to cell swelling due to disturbances in ion homeostasis following hypersynchronous neuronal firing and its associated metabolic demands. In this study, we characterised and imaged this slow impedance response during neocortical and hippocampal epileptiform events in the rat brain and evaluated its relationship to the underlying neural activity. APPROACH Neocortical or hippocampal seizures, comprising repeatable series of high-amplitude ictal spikes, were induced by electrically stimulating the sensorimotor cortex or perforant path of rats anaesthetised with fentanyl-isoflurane. Transfer impedances were measured during ≥30 consecutive seizures, by applying a sinusoidal current through independent electrode pairs on an epicortical array, and combined to generate an EIT image of slow activity. MAIN RESULTS The slow impedance responses were consistently time-matched to the end of seizures and EIT images of this activity were reconstructed reproducibly in all animals (p < 0.03125, N = 5). These displayed foci of activity that were spatially confined to the facial somatosensory cortex and dentate gyrus for neocortical and hippocampal seizures, respectively, and encompassed a larger volume as the seizure progressed. Centre-of-mass analysis of reconstructions revealed that this activity corresponded to the true location of the epileptogenic zone, as determined by EEG recordings and fast neural EIT measurements which were obtained simultaneously. SIGNIFICANCE These findings suggest that the slow impedance response presents a reliable marker of hypersynchronous neuronal activity during epileptic seizures and can thus be utilised for investigating the mechanisms of epileptogenesis in vivo and for aiding localisation of the epileptogenic zone during presurgical evaluation of patients with refractory epilepsies.
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Affiliation(s)
- Sana Hannan
- Department of Medical Physics and Biomedical Engineering, University College London, United Kingdom
| | - Kirill Aristovich
- Department of Medical Physics and Biomedical Engineering, University College London, United Kingdom
| | - Mayo Faulkner
- Wolfson Institute for Biomedical Research, University College London, United Kingdom
| | - James Avery
- Department of Surgery and Cancer, Imperial College London, United Kingdom
| | - Matthew C Walker
- UCL Queen Square Institute of Neurology, University College London, United Kingdom
| | - David S Holder
- Department of Medical Physics and Biomedical Engineering, University College London, United Kingdom
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Mansouri S, Alharbi Y, Haddad F, Chabcoub S, Alshrouf A, Abd-Elghany AA. Electrical Impedance Tomography - Recent Applications and Developments. JOURNAL OF ELECTRICAL BIOIMPEDANCE 2021; 12:50-62. [PMID: 35069942 PMCID: PMC8667811 DOI: 10.2478/joeb-2021-0007] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Indexed: 06/12/2023]
Abstract
Electrical impedance tomography (EIT) is a low-cost noninvasive imaging method. The main purpose of this paper is to highlight the main aspects of the EIT method and to review the recent advances and developments. The advances in instrumentation and in the different image reconstruction methods and systems are demonstrated in this review. The main applications of the EIT are presented and a special attention made to the papers published during the last years (from 2015 until 2020). The advantages and limitations of EIT are also presented. In conclusion, EIT is a promising imaging approach with a strong potential that has a large margin of progression before reaching the maturity phase.
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Affiliation(s)
- Sofiene Mansouri
- Department of Biomedical Technology, College of Applied Medical Sciences, Prince Sattam bin Abdulaziz University, Al-Kharj, Saudi Arabia
- Laboratory of Biophysics and Medical Technologies, Higher Institute of Medical Technologies of Tunis, University of Tunis El Manar, TunisTunisia
| | - Yousef Alharbi
- Department of Biomedical Technology, College of Applied Medical Sciences, Prince Sattam bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Fatma Haddad
- Laboratory of Biophysics and Medical Technologies, Higher Institute of Medical Technologies of Tunis, University of Tunis El Manar, TunisTunisia
| | - Souhir Chabcoub
- Laboratory of Biophysics and Medical Technologies, Higher Institute of Medical Technologies of Tunis, University of Tunis El Manar, TunisTunisia
| | - Anwar Alshrouf
- Department of Biomedical Technology, College of Applied Medical Sciences, Prince Sattam bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Amr A. Abd-Elghany
- Department of Biomedical Technology, College of Applied Medical Sciences, Prince Sattam bin Abdulaziz University, Al-Kharj, Saudi Arabia
- Biophysics Department, Faculty of Science, Cairo University, CairoEgypt
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8
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Development of a Portable, Reliable and Low-Cost Electrical Impedance Tomography System Using an Embedded System. ELECTRONICS 2020. [DOI: 10.3390/electronics10010015] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Electrical impedance tomography (EIT) is a useful procedure with applications in industry and medicine, particularly in the lungs and brain area. In this paper, the development of a portable, reliable and low-cost EIT system for image reconstruction by using an embedded system (ES) is introduced herein. The novelty of this article is the hardware development of a complete low-cost EIT system, as well as three simple and efficient algorithms that can be implemented on ES. The proposed EIT system applies the adjacent voltage method, starting with an impedance acquisition stage that sends data to a Raspberry Pi 4 (RPi4) as ES. To perform the image reconstruction, a user interface was developed by using GNU Octave for RPi4 and the EIDORS library. A statistical analysis is performed to determine the best average value from the samples measured by using an analog-to-digital converter (ADC) with a capacity of 30 kSPS and 24-bit resolution. The tests for the proposed EIT system were performed using materials such as metal, glass and an orange to simulate its application in food industry. Experimental results show that the statistical median is more accurate with respect to the real voltage measurement; however, it represents a higher computational cost. Therefore, the mean is calculated and improved by discarding data values in a transitory state, achieving better accuracy than the median to determine the real voltage value, enhancing the quality of the reconstructed images. A performance comparison between a personal computer (PC) and RPi4 is presented. The proposed EIT system offers an excellent cost-benefit ratio with respect to a traditional PC, taking into account precision, accuracy, energy consumption, price, light weight, size, portability and reliability. The proposed EIT system has potential application in mechanical ventilation, food industry and structural health monitoring.
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Ravagli E, Mastitskaya S, Thompson N, Iacoviello F, Shearing PR, Perkins J, Gourine AV, Aristovich K, Holder D. Imaging fascicular organization of rat sciatic nerves with fast neural electrical impedance tomography. Nat Commun 2020; 11:6241. [PMID: 33288760 PMCID: PMC7721735 DOI: 10.1038/s41467-020-20127-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 11/13/2020] [Indexed: 02/06/2023] Open
Abstract
Imaging compound action potentials (CAPs) in peripheral nerves could help avoid side effects in neuromodulation by selective stimulation of identified fascicles. Existing methods have low resolution, limited imaging depth, or are invasive. Fast neural electrical impedance tomography (EIT) allows fascicular CAP imaging with a resolution of <200 µm, <1 ms using a non-penetrating flexible nerve cuff electrode array. Here, we validate EIT imaging in rat sciatic nerve by comparison to micro-computed tomography (microCT) and histology with fluorescent dextran tracers. With EIT, there are reproducible localized changes in tissue impedance in response to stimulation of individual fascicles (tibial, peroneal and sural). The reconstructed EIT images correspond to microCT scans and histology, with significant separation between the fascicles (p < 0.01). The mean fascicle position is identified with an accuracy of 6% of nerve diameter. This suggests fast neural EIT can reliably image the functional fascicular anatomy of the nerves and so aid selective neuromodulation.
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Affiliation(s)
- Enrico Ravagli
- Department of Medical Physics and Biomedical Engineering, University College London, London, UK
| | - Svetlana Mastitskaya
- Department of Medical Physics and Biomedical Engineering, University College London, London, UK.
| | - Nicole Thompson
- Department of Medical Physics and Biomedical Engineering, University College London, London, UK
| | - Francesco Iacoviello
- Electrochemical Innovation Laboratory, Department of Chemical Engineering, University College London, London, UK
| | - Paul R Shearing
- Electrochemical Innovation Laboratory, Department of Chemical Engineering, University College London, London, UK
| | - Justin Perkins
- Clinical Science and Services, Royal Veterinary College, Hawkshead Lane, Hatfield, UK
| | - Alexander V Gourine
- Centre for Cardiovascular and Metabolic Neuroscience, Department of Neuroscience, Physiology and Pharmacology, University College London, London, UK
| | - Kirill Aristovich
- Department of Medical Physics and Biomedical Engineering, University College London, London, UK
| | - David Holder
- Department of Medical Physics and Biomedical Engineering, University College London, London, UK
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Hannan S, Faulkner M, Aristovich K, Avery J, Walker MC, Holder DS. Optimised induction of on-demand focal hippocampal and neocortical seizures by electrical stimulation. J Neurosci Methods 2020; 346:108911. [DOI: 10.1016/j.jneumeth.2020.108911] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Revised: 08/10/2020] [Accepted: 08/12/2020] [Indexed: 11/25/2022]
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11
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Hannan S, Faulkner M, Aristovich K, Avery J, Walker MC, Holder DS. In vivo imaging of deep neural activity from the cortical surface during hippocampal epileptiform events in the rat brain using electrical impedance tomography. Neuroimage 2020; 209:116525. [DOI: 10.1016/j.neuroimage.2020.116525] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Revised: 12/12/2019] [Accepted: 01/06/2020] [Indexed: 02/07/2023] Open
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Zhu D, McEwan A, Eiber C. Microelectrode array electrical impedance tomography for fast functional imaging in the thalamus. Neuroimage 2019; 198:44-52. [PMID: 31108212 DOI: 10.1016/j.neuroimage.2019.05.023] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Revised: 04/26/2019] [Accepted: 05/09/2019] [Indexed: 10/26/2022] Open
Abstract
Electrical Impedance Tomography (EIT) has the potential to be able to observe functional tomographic images of neural activity in the brain at millisecond time-scales. Prior modelling and experimental work has shown that EIT is capable of imaging impedance changes from neural depolarisation in rat somatosensory cortex. Here, we investigate the feasibility of EIT for imaging impedance changes using a stereotaxically implanted microelectrode array in the thalamus. Microelectrode array EIT was simulated using an anatomically accurate marmoset brain model. Impedance imaging was validated and detectability estimated using physiological noise recorded from the marmoset visual thalamus. The results suggest that visual-input-driven impedance changes in visual subcortical bodies within 300 μm of the implanted array could be reliably reconstructed and localised, comparable to local field potential measurements. Furthermore, we demonstrated that microelectrode array EIT could reconstruct concurrent activity in multiple subcortical bodies simultaneously.
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Affiliation(s)
- Danyi Zhu
- School of Electrical and Information Engineering, The University of Sydney, Camperdown, NSW, Australia
| | - Alistair McEwan
- School of Electrical and Information Engineering, The University of Sydney, Camperdown, NSW, Australia
| | - Calvin Eiber
- Save Sight Institute, The University of Sydney, 8 Macquarie St, Sydney, NSW, Australia; School of Medical Sciences, University of Sydney, Sydney, NSW, Australia; Australian Research Council Centre of Excellence for Integrative Brain Function, Australia.
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Hannan S, Faulkner M, Aristovich K, Avery J, Holder D. Investigating the safety of fast neural electrical impedance tomography in the rat brain. Physiol Meas 2019; 40:034003. [DOI: 10.1088/1361-6579/ab0d53] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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14
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Hannan S, Faulkner M, Aristovich K, Avery J, Walker M, Holder D. Imaging fast electrical activity in the brain during ictal epileptiform discharges with electrical impedance tomography. NEUROIMAGE-CLINICAL 2018; 20:674-684. [PMID: 30218899 PMCID: PMC6140294 DOI: 10.1016/j.nicl.2018.09.004] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/27/2018] [Revised: 07/27/2018] [Accepted: 09/02/2018] [Indexed: 12/19/2022]
Abstract
Electrical Impedance Tomography (EIT) is an emerging medical imaging technique which can produce tomographic images of internal impedance changes within an object using non-penetrating surface electrodes. It has previously been used to image impedance changes due to neuronal depolarisation during evoked potentials in the rat somatosensory cortex with a resolution of 2 ms and <200 μm, using an epicortical electrode array. The purpose of this work was to use this technique to elucidate the intracortical spatiotemporal trajectory of ictal spike-and-wave discharges (SWDs), induced by electrical stimulation in an acute rat model of epilepsy, throughout the cerebral cortex. Seizures lasting 16.5 ± 5.3 s with repetitive 2-5 Hz SWDs were induced in five rats anaesthetised with fentanyl-isoflurane. Transfer impedance measurements were obtained during each seizure with a 57-electrode epicortical array by applying 50 μA current at 1.7 kHz to two electrodes and recording voltages from all remaining electrodes. Images were reconstructed from averaged SWD-related impedance traces obtained from EIT measurements in successive seizures. We report the occurrence of reproducible impedance changes during the initial spike phase, which had an early onset in the whisker barrel cortex and spread posteriorly, laterally and ventrally over 20 ms (p < 0.03125, N = 5). These findings, which confirm and extend knowledge of SWD initiation and expression, suggest that EIT is a valuable neuroimaging tool for improving understanding of neural circuits implicated in epileptic phenomena.
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Affiliation(s)
- Sana Hannan
- Department of Medical Physics and Biomedical Engineering, University College London, UK.
| | - Mayo Faulkner
- Department of Medical Physics and Biomedical Engineering, University College London, UK
| | - Kirill Aristovich
- Department of Medical Physics and Biomedical Engineering, University College London, UK
| | - James Avery
- Department of Medical Physics and Biomedical Engineering, University College London, UK
| | | | - David Holder
- Department of Medical Physics and Biomedical Engineering, University College London, UK
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Hannan S, Faulkner M, Aristovich K, Avery J, Holder D. Frequency-dependent characterisation of impedance changes during epileptiform activity in a rat model of epilepsy. Physiol Meas 2018; 39:085003. [DOI: 10.1088/1361-6579/aad5f4] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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