Low-cost, scalable, and automated fluid sampling for fluidics applications

Effects of Core Size and Surfactant Choice on Fluid Saturation Development in Surfactant/Polymer Corefloods

Surfactant/polymer flooding allows for a significant increase in oil recovered at both laboratory and field scales. Limitations in application at the reservoir scale are, however, present and can be associated with both the complexity of the underlying displacement process and the time-intensive nature of the up-scaling workflow. Pivotal to this workflow are corefloods which serve to both validate the extent of oil recovery and extract modeling parameters used in upscaling. To enhance the understanding of the evolution of the saturation distribution within the rock sample, we present the utilization of X-ray computed tomography to image six distinct surfactant/polymer corefloods. In doing so, we visualize the formation and propagation of an oil bank by reconstructing multidimensional saturation maps. We conduct experiments on three distinct core sizes and two different surfactants, an SBDS/isbutanol formulation and an L-145-10s 90 formulation, in order to decouple the effect of these two parameters on the flow behavior observed in situ. We note that the oil production post oil bank breakthrough is primarily influenced by the surfactant choice, with the SDBS/isobutanol formulation displaying longer tailing production of a low oil cut. On the other hand, the core size dominated the extent of self-similarity of the saturation profiles with smaller cores showing less overlap in the self-similarity profiles. Consequently, we highlight the difference in applicability of a fractional flow approach to larger and smaller cores for upscaling parameter extraction and thus provide guidance for corefloods where direct imaging is not available.

An open-source smart fraction collector for isocratic preparative liquid chromatography

Preparative liquid chromatography is a technique for separating complex samples or isolating pure compounds from complex extracts. It involves eluting samples through a packed column and selectively collecting or isolating the separated bands in a sequence of fractions. Depending on the column length and the sample complexity, a large number of fractions may be obtained, making fraction collection a laborious and time-consuming process. Manual fraction collection is also tedious, error-prone, less reproducible, and susceptible to contamination. Several commercial and lab-made solutions are available for automated fraction collection, but most systems do not synchronize with the instrument detector and collect fractions at fixed volumes or time intervals. We have assembled a low-cost Arduino-based smart fraction collector that can record the signal from the UV-vis detector of the chromatography instrument and enable the automated selective collection of the targeted bands. The system consists of a robot equipped with position sensors and a 3-way solenoid valve that switches the column effluent between the waste or collection positions. By proper programming, an Arduino board records the detector response and actuates the solenoid valve, the position sensors, and the stepper motors to collect the target chromatographic bands.

Low-cost modular chromatography column rack and vial holders

Gravity-driven chromatography columns are used in scientific, engineering, medical, and industrial fields to separate desired compounds from solutions. Running multiple columns simultaneously saves time and improves procedural consistency. Though column chromatography is widely used, to meet their laboratory needs many investigators must resort to designing and fabricating custom racks for holding their chromatography columns. We have created a robust column rack design, with collection vial holders, that is easily made, inexpensive to build, and may be easily adapted to fit experimental needs. The column holder can be made to hold various sizes of columns (and can be interchanged as necessary); the height of columns above collection vials can be precisely set; and the design is modular, so the rack and vial holders can be expanded to accommodate the desired numbers of columns and the numbers and sizes of vials used to collect fractions eluted from each column. Importantly, the rack is made of inexpensive, readily-available materials and the fabrication is straightforward. Here we present details of the rack's features, a list of materials, and instructions for making it. We hope our design will help investigators who perform gravity-driven column chromatography.

REVOLVER: A low-cost automated protein purifier based on parallel preparative gravity column workflows

Protein purification is a ubiquitous procedure in biochemistry and the life sciences, and represents a key step in the protein production pipeline. The need for scalable and parallel protein purification systems is driven by the demands for increasing the throughput of recombinant protein characterization. Therefore, automating the process to simultaneously handle multiple samples with minimal human intervention is highly desirable, yet there are only a handful of such systems that have been developed, all of which are closed source and expensive. To address this challenge, we present REVOLVER, a 3D-printed programmable protein purification system based on gravity-column workflows and controlled by Arduino boards that can be built for under $130 USD. REVOLVER takes a cell lysate sample and completes a full protein purification process with almost no human intervention and yields results indistinguishable from those obtained by an experienced biochemist when purifying a real-world protein sample. We further present and describe MULTI-VOLVER, a scalable version of the REVOLVER that allows for parallel purification of up to six samples and can be built for under $250 USD. Both systems can help accelerate protein purification and ultimately link them to bio-foundries for protein characterization and engineering.

Open source fraction collector/MALDI spotter for proteomics

We describe a complete open-source hardware/software solution for high performance thermostatted peptide fraction collection to support mass spectrometry experiments with complex proteomes. The instrument is easy to assemble using parts readily available through retail channels at a fraction of the cost compared to typical commercial systems. Control software is written in Python allowing for rapid customization. We demonstrate several useful applications, including the automated deposition of LC separated peptides for matrix-assisted laser desorption ionization mass spectrometry (MALDI-MS) as well as collection and concatenation of peptide fractions from nanoflow HPLC separations.