Auto-annotating sleep stages based on polysomnographic data

GRU-powered sleep stage classification with permutation-based EEG channel selection

We present a new approach to classifying the sleep stage that incorporates a computationally inexpensive method based on permutations for channel selection and takes advantage of deep learning power, specifically the gated recurrent unit (GRU) model, along with other deep learning methods. By systematically permuting the electroencephalographic (EEG) channels, different combinations of EEG channels are evaluated to identify the most informative subset for the classification of the 5-class sleep stage. For analysis, we used an EEG dataset that was collected at the International Institute for Integrative Sleep Medicine (WPI-IIIS) at the University of Tsukuba in Japan. The results of these explorations provide many new insights such as the (1) drastic decrease in performance when channels are fewer than 3, (2) 3-random channels selected by permutation provide the same or better prediction than the 3 channels recommended by the American Academy of Sleep Medicine (AASM), (3) N1 class suffers the most in prediction accuracy as the channels drop from 128 to 3 random or 3 AASM, and (4) no single channel provides acceptable levels of accuracy in the prediction of 5 classes. The results obtained show the GRU's ability to retain essential temporal information from EEG data, which allows capturing the underlying patterns associated with each sleep stage effectively. Using permutation-based channel selection, we enhance or at least maintain as high model efficiency as when using high-density EEG, incorporating only the most informative EEG channels.

Sleep stage prediction using multimodal body network and circadian rhythm

Quality sleep plays a vital role in living beings as it contributes extensively to the healing process and the removal of waste products from the body. Poor sleep may lead to depression, memory deficits, heart, and metabolic problems, etc. Sleep usually works in cycles and repeats itself by transitioning into different stages of sleep. This study is unique in that it uses wearable devices to collect multiple parameters from subjects and uses this information to predict sleep stages and sleep patterns. For the multivariate multiclass sleep stage prediction problem, we have experimented with both memoryless (ML) and memory-based models on seven database instances, that is, five from the collected dataset and two from the existing datasets. The Random Forest classifier outclassed the ML models that are LR, MLP, kNN, and SVM with accuracy (ACC) of 0.96 and Cohen Kappa 0.96, and the memory-based model long short-term memory (LSTM) performed well on all the datasets with the maximum attained accuracy of 0.88 and Kappa 0.82. The proposed methodology was also validated on a longitudinal dataset, the Multiethnic Study of Atherosclerosis (MESA), with ACC and Kappa of 0.75 and 0.64 for ML models and 0.86 and 0.78 for memory-based models, respectively, and from another benchmarked Apple Watch dataset available on Physio-Net with ACC and Kappa of 0.93 and 0.93 for ML and 0.92 and 0.87 for memory-based models, respectively. The given methodology showed better results than the original work and indicates that the memory-based method works better to capture the sleep pattern.

Multi-task learning for arousal and sleep stage detection using fully convolutional networks

Objective.Sleep is a critical physiological process that plays a vital role in maintaining physical and mental health. Accurate detection of arousals and sleep stages is essential for the diagnosis of sleep disorders, as frequent and excessive occurrences of arousals disrupt sleep stage patterns and lead to poor sleep quality, negatively impacting physical and mental health. Polysomnography is a traditional method for arousal and sleep stage detection that is time-consuming and prone to high variability among experts.Approach. In this paper, we propose a novel multi-task learning approach for arousal and sleep stage detection using fully convolutional neural networks. Our model, FullSleepNet, accepts a full-night single-channel EEG signal as input and produces segmentation masks for arousal and sleep stage labels. FullSleepNet comprises four modules: a convolutional module to extract local features, a recurrent module to capture long-range dependencies, an attention mechanism to focus on relevant parts of the input, and a segmentation module to output final predictions.Main results.By unifying the two interrelated tasks as segmentation problems and employing a multi-task learning approach, FullSleepNet achieves state-of-the-art performance for arousal detection with an area under the precision-recall curve of 0.70 on Sleep Heart Health Study and Multi-Ethnic Study of Atherosclerosis datasets. For sleep stage classification, FullSleepNet obtains comparable performance on both datasets, achieving an accuracy of 0.88 and an F1-score of 0.80 on the former and an accuracy of 0.83 and an F1-score of 0.76 on the latter.Significance. Our results demonstrate that FullSleepNet offers improved practicality, efficiency, and accuracy for the detection of arousal and classification of sleep stages using raw EEG signals as input.

Deep convolutional architecture-based hybrid learning for sleep arousal events detection through single-lead EEG signals

INTRODUCTION

Detecting arousal events during sleep is a challenging, time-consuming, and costly process that requires neurology knowledge. Even though similar automated systems detect sleep stages exclusively, early detection of sleep events can assist in identifying neuropathology progression.

METHODS

An efficient hybrid deep learning method to identify and evaluate arousal events is presented in this paper using only single-lead electroencephalography (EEG) signals for the first time. Using the proposed architecture, which incorporates Inception-ResNet-v2 learning transfer models and optimized support vector machine (SVM) with the radial basis function (RBF) kernel, it is possible to classify with a minimum error level of less than 8%. In addition to maintaining accuracy, the Inception module and ResNet have led to significant reductions in computational complexity for the detection of arousal events in EEG signals. Moreover, in order to improve the classification performance of the SVM, the grey wolf algorithm (GWO) has optimized its kernel parameters.

RESULTS

This method has been validated using pre-processed samples from the 2018 Challenge Physiobank sleep dataset. In addition to reducing computational complexity, the results of this method show that different parts of feature extraction and classification are effective at identifying sleep disorders. The proposed model detects sleep arousal events with an average accuracy of 93.82%. With the lead present in the identification, the method becomes less aggressive in recording people's EEG signals.

CONCLUSION

According to this study, the suggested strategy is effective in detecting arousals in sleep disorder clinical trials and may be used in sleep disorder detection clinics.

DeepSleep 2.0: Automated Sleep Arousal Segmentation via Deep Learning

DeepSleep 2.0 is a compact version of DeepSleep, a state-of-the-art, U-Net-inspired, fully convolutional deep neural network, which achieved the highest unofficial score in the 2018 PhysioNet Computing Challenge. The proposed network architecture has a compact encoder/decoder structure containing only 740,551 trainable parameters. The input to the network is a full-length multichannel polysomnographic recording signal. The network has been designed and optimized to efficiently predict nonapnea sleep arousals on held-out test data at a 5 ms resolution level, while not compromising the prediction accuracy. When compared to DeepSleep, the obtained experimental results in terms of gross area under the precision–recall curve (AUPRC) and gross area under the receiver operating characteristic curve (AUROC) suggest a lightweight architecture, which can achieve similar prediction performance at a lower computational cost, is realizable.

A journey toward artificial intelligence-assisted automated sleep scoring

Sleep scoring is a tedious, time-consuming process that presents a huge challenge in clinics. Leveraging the state-of-the-art U-net architecture, Zhang et al. developed a deep learning algorithm to simultaneously annotate basic and pathologic sleep stages. This model can analyze a full-length sleep record in a few seconds with high accuracy.