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Ballı Z, Arslantaş A, Güngördü Solǧun D, Ağırtaş MS. DNA binding studies of the 2,10,16,24–tetrakis (phenoxy-3-methoxybenzoic acid)phthalocyaninato) Co(II) and Cu(II) compounds. SN APPLIED SCIENCES 2020. [DOI: 10.1007/s42452-020-2640-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
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Demirbaş Ü, Barut B, Özel A, Çelik F, Kantekin H, Sancak K. Synthesis, characterization and DNA interaction properties of the novel peripherally tetra 4-(3-methyl-4-(3-morpholinopropyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl) substituted water soluble Zn(II) and Cu(II) phthalocyanines. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.10.006] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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3
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Courrol LC, de Oliveira Gonçalves K, Vieira DP. Emerging Role of Aminolevulinic Acid and Gold Nanoparticles Combination in Theranostic Applications. Nanotheranostics 2019. [DOI: 10.1007/978-3-030-29768-8_15] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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4
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Features of interaction of tetraiodide meso-tetra(N-methyl-3-pyridyl)porphyrin with bovine serum albumin. J Mol Liq 2018. [DOI: 10.1016/j.molliq.2018.06.030] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Lebedeva NS, Yurina ES, Gubarev YA, Syrbu SA. Interactions of tetracationic porphyrins with DNA and their effects on DNA cleavage. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 199:235-241. [PMID: 29625380 DOI: 10.1016/j.saa.2018.03.066] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2017] [Revised: 03/19/2018] [Accepted: 03/23/2018] [Indexed: 06/08/2023]
Abstract
The interaction of tetracationic porphyrins with DNA was studied using UV-Vis absorption, fluorescence spectroscopy and viscometry, and the particle sizes were determined. Аs cationic porphyrins, two isomer porphyrins, 3,3',3″,3‴-(5,10,15,20-Porphyrintetrayl)tetrakis(1-methylpyridinium) (TMPyP3) and 4,4',4″,4‴-(5,10,15,20-Porphyrintetrayl)tetrakis(1-methylpyridinium) (TMPyP4), were studied. They differ in the position of NCH3+ group in phenyl ring of the porphyrins and hence, in degree of freedom of rotation of the phenyl rings about the central macrocycle. It was found that intercalated complexes are formed at DNA/porphyrin molar ratios (R) of 2.2 and 3.9 for TMPyP3 и TMPyP4, respectively. Decreasing R up to 0.4 and 0.8 for TMPyP3 и TMPyP4, respectively, leads mainly to formation of outside complexes due to π-π stacking between the porphyrin chromophores interacting electrostatically with phosphate framework of DNA. Each type of the obtained complexes was characterized using Scatchard approach. It was ascertained that the affinity of TMPyP4 to DNA is stronger than TMPyP3, meanwhile the wedge effect of the latter is higher. The differences between the porphyrin isomers become more evident at irradiation of their complexes with DNA. It was established that irradiation of the intercalated complexes results in DNA fragmentation. In the case of TMPyP4, DNA fragments of different size are formed. The irradiation of the outside DNA/porphyrin complexes leads to cleavage of DNA (TMPyP3 and TMPyP4) and partial destruction of the complex due to photolysis of the porphyrin (TMPyP3).
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Affiliation(s)
- Natalya Sh Lebedeva
- G.A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Akademicheskaya, 1, 153045 Ivanovo, Russia
| | - Elena S Yurina
- G.A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Akademicheskaya, 1, 153045 Ivanovo, Russia
| | - Yury A Gubarev
- G.A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Akademicheskaya, 1, 153045 Ivanovo, Russia.
| | - Sergey A Syrbu
- G.A. Krestov Institute of Solution Chemistry of the Russian Academy of Sciences, Akademicheskaya, 1, 153045 Ivanovo, Russia
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Lee HS, Han JH, Park JH, Heo ME, Hirakawa K, Kim SK, Cho DW. Relationship between the photoinduced electron transfer and binding modes of a pyrene-porphyrin dyad to DNA. Phys Chem Chem Phys 2018; 19:27123-27131. [PMID: 28967018 DOI: 10.1039/c7cp05211a] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The binding modes of a pyrene-porphyrin dyad, (1-pyrenyl)-tris(N-methyl-p-pyridino)porphyrin (PyTMpyP), to DNA and its photophysical properties have been investigated using various spectroscopic techniques. The circular dichroism (CD) spectrum of PyTMpyP bound to DNA (PyTMpyP-DNA) showed one negative and two positive bands in the Soret region. The CD signal in the pyrene absorption region was positive. The shape of the CD spectrum does not support an intercalative binding mode of TMpyP, which would typically afford a negative CD band in the absence of the pyrene moiety. Linear dichroism (LD) experiments revealed a very small signal in the Soret region, which also challenges the intercalation of TMpyP into DNA. Upon excitation of the pyrene moiety, the emission intensity of porphyrin in aqueous solution was quenched due to a photoinduced electron transfer (PET) process between the pyrenyl and porphyrin moieties. On the other hand, the emission of porphyrin was markedly enhanced upon binding to DNA, as the PET process from the excited pyrene moiety to TMpyP was suppressed when bound to DNA. The PET process occurs in the timescale of 65 ps, and could be detected by femtosecond transient absorption spectroscopic methods. Two fluorescence decay times were observed for PyTMpyP in aqueous solution (0.78 and 4.8 ns). Both decay times increased upon binding to DNA owing to environment and/or conformational changes in PyTMpyP. The driving force (ΔG) of the PET process was evaluated under conditions of minor and major groove binding. The PET process and photophysical properties of the PyTMpyP dyad were concluded to be influenced by the binding mode.
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Affiliation(s)
- Hyun Suk Lee
- Department of Chemistry, Yeungnam University, Gyeongsan, Gyeong-buk 38541, Republic of Korea.
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Expression of Genes Involved in Porphyrin Biosynthesis Pathway in the Human Renal Cell Carcinoma. J Fluoresc 2015; 25:1363-9. [PMID: 26245452 DOI: 10.1007/s10895-015-1626-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2015] [Accepted: 07/26/2015] [Indexed: 01/10/2023]
Abstract
Renal cell carcinoma (RCC) remains one of the greatest challenges of urological oncology and is the third leading cause of death in genitourinary cancers. Surgery may be curative when patients present with localized disease. Our previous results demonstrated the autofluorescence of blood PpIX in primary RCC mouse model and an increase in fluorescence intensity as a function of growth of the subcutaneous tumor mass. In another work, a nice correlation between the growth of the tumor mass and tissue fluorescence intensity was found. The aim of this study was to evaluate the expression profile of porphyrin biosynthesis pathway-related genes of human kidney cells. We used two kidney cell lines, one normal (HK2) and another malignant (Caki-1). Endogenous and 5-aminolevolinic acid (ALA) induced protoporphyrin IX (PpIX) HK2 and Caki-1 cells were analyzed by fluorescence spectroscopy. Real-time quantitative polymerase chain reaction (qRT-PCR) was used to measure mRNA of those genes. Emission spectra were obtained by exciting the samples at 405 nm. For ALA untreated cells the maximum fluorescence intensity was detected at 635 nm. The mean peak area of emission spectra in both cells types increased linearly in function of cell number. Besides, basal levels of PpIX autofluorescence of each cell concentration of HK2 samples were significantly lower than those of Caki-1 samples. For ALA-treated cells the mean PpIX spectra shows PpIX emission peak at 635 nm with a shoulder at 700 nm. Analysis of PpIX fluorescence intensity ratio between tumor cells and HK2 cells showed that fluorescence intensity was, on average, 26 times greater in tumor cells than in healthy cells. qRT-PCR revealed that in Caki-1 ALA-treated cells, PEPT gene was significantly up-regulated and FECH and HO-1 genes were significantly down regulated in comparison with HK2 ALA-treated cells. In conclusion, our results demonstrate the preferential accumulation of ALA-induced PpIX in human RCC and also indicate that PEPT1, FECH and HO-1 genes are major contributors to this accumulation.
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de Oliveira Gonçalves K, da Silva MN, Sicchieri LB, de Oliveira Silva FR, de Matos RA, Courrol LC. Aminolevulinic acid with gold nanoparticles: a novel theranostic agent for atherosclerosis. Analyst 2015; 140:1974-80. [DOI: 10.1039/c4an02166e] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
5-Aminolevulinic acid gold nanoparticles functionalized with polyethylene glycol were synthesized and administered to rabbits to evaluate their use in clinical practice as theranostic agents for atherosclerosis.
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Affiliation(s)
- Karina de Oliveira Gonçalves
- Universidade Federal de São Paulo
- Laboratório de Lasers e Óptica Biomédica Aplicada (LOBA) Instituto de Ciências Ambientais
- Químicas e Farmacêuticas (ICAQF)
- Departamento de Ciências Exatas e da Terra (DCET)
- 09972-270 – Diadema
| | - Monica Nascimento da Silva
- Universidade Federal de São Paulo
- Laboratório de Lasers e Óptica Biomédica Aplicada (LOBA) Instituto de Ciências Ambientais
- Químicas e Farmacêuticas (ICAQF)
- Departamento de Ciências Exatas e da Terra (DCET)
- 09972-270 – Diadema
| | | | | | - Ricardo Almeida de Matos
- Universidade Federal de São Paulo
- Laboratório de Lasers e Óptica Biomédica Aplicada (LOBA) Instituto de Ciências Ambientais
- Químicas e Farmacêuticas (ICAQF)
- Departamento de Ciências Exatas e da Terra (DCET)
- 09972-270 – Diadema
| | - Lilia Coronato Courrol
- Universidade Federal de São Paulo
- Laboratório de Lasers e Óptica Biomédica Aplicada (LOBA) Instituto de Ciências Ambientais
- Químicas e Farmacêuticas (ICAQF)
- Departamento de Ciências Exatas e da Terra (DCET)
- 09972-270 – Diadema
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Nascimento da Silva M, Sicchieri LB, Rodrigues de Oliveira Silva F, Andrade MF, Courrol LC. Liquid biopsy of atherosclerosis using protoporphyrin IX as a biomarker. Analyst 2014; 139:1383-8. [DOI: 10.1039/c3an01945d] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Juzeniene A, Iani V, Moan J. Clearance mechanism of protoporphyrin IX from mouse skin after application of 5-aminolevulinic acid. Photodiagnosis Photodyn Ther 2013; 10:538-45. [PMID: 24284108 DOI: 10.1016/j.pdpdt.2013.05.008] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2013] [Revised: 05/23/2013] [Accepted: 05/25/2013] [Indexed: 11/18/2022]
Abstract
BACKGROUND 5-Aminolevulinic acid (ALA) or its esters mediated photodynamic therapy (PDT) is the most widely practiced form of PDT in dermatology. One of its advantages is that undesirable photosensitization lasts only for 24-48 h. In order to optimize ALA-PDT it is necessary to understand the mechanisms of intracellular production and clearance of PpIX (efflux from cells into blood stream and/or its conversion into haem). The aim of this study is to investigate the factors controlling the clearance of intracellular PpIX from healthy skin of mice. METHODS PpIX was induced in mouse skin by topical or systemic application of ALA or by topical application of the iron chelator ethylenediaminetetraacetic acid (EDTA). Fluorescence spectroscopy was used to study PpIX kinetics in alive and dead skin. RESULTS Topical application of ALA or EDTA leads to porphyrin production in living skin, but not in excised skin. The clearance rates of PpIX from alive and dead skin were the same in the absence of an intracellular ALA pool. The clearance half-life of EDTA-induced PpIX was 4-7 times longer than that of PpIX after application of ALA. CONCLUSIONS Skin temperature and intracellular iron availability strongly affect PpIX clearance, while ALA application mode (topical versus systemic) and skin viability (dead versus alive) have no influence on PpIX decay. These results demonstrate that the clearance kinetics of PpIX from skin are determined mostly by the conversion of PpIX into haem, while the cellular efflux of PpIX into blood plays a minor role.
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Affiliation(s)
- Asta Juzeniene
- Department of Radiation Biology, Institute for Cancer Research, Oslo University Hospital, Montebello, 0310 Oslo, Norway.
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Lee C, Gong L, Shon Y, Lee YS, Lee SJ, Han S, Kim SK. Bis-intercalation of a cationic porphyrin dimer linked with trietylene glycol derivative to DNA from the major groove. J PORPHYR PHTHALOCYA 2012. [DOI: 10.1142/s1088424612501283] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The binding mode of a porphyrin dimer to double stranded native DNA was investigated in this study using normal electric absorption, circular dichroism (CD) and linear dichroism (LD) spectroscopies. At the time of mixing, the spectral properties of the porphyrin dimer upon its association with DNA were characterized by hypochromism and a red shift in the absorption spectrum and by complicated CD and negative LD in the Soret region. As time elapsed, the CD spectrum became a negative single band and the negative LD signal increased. These spectral changes suggested that the majority of both porphyrin moieties of the dimer intercalated between the DNA base-pairs. The changes in the spectral characteristics of the DNA bound porphyrin-dimer were similar when the minor groove of DNA was saturated by 4′,6-diamidino-2-phenylindole (DAPI), which is well-known minor groove binding molecule. The spectral properties of DAPI, which can be summarized by a large positive induced CD in the DAPI absorption region (300~400 nm) and wavelength-independent positive reduced LD, remained intact when the porphyrin dimer was present. These observations indicated that both DAPI and porphyrin bind to DNA simultaneously, and furthermore, the bis-intercalation of the porphyrin dimer occurs in the major groove.
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Affiliation(s)
- Changyun Lee
- Department of Chemistry, Yeungnam University, Gyeongsan City, Gyeong-buk 712-749, Republic of Korea
| | - Lindan Gong
- Department of Chemistry, Yeungnam University, Gyeongsan City, Gyeong-buk 712-749, Republic of Korea
| | - Youngku Shon
- Department of Chemistry, Yeungnam University, Gyeongsan City, Gyeong-buk 712-749, Republic of Korea
| | - Young Sun Lee
- Department of Chemistry, Korea University, Seoul 136-701, Republic of Korea
| | - Suk Joong Lee
- Department of Chemistry, Korea University, Seoul 136-701, Republic of Korea
| | - Sungwook Han
- School of Herb Medicine Resource, Kyungwoon University, Kumi, Gyeong-buk 730-852, Republic of Korea
| | - Seog K. Kim
- Department of Chemistry, Yeungnam University, Gyeongsan City, Gyeong-buk 712-749, Republic of Korea
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Gong L, Bae I, Kim SK. Effect of Axial Ligand on the Binding Mode of M-meso-Tetrakis(N-methylpyridinium-4-yl)porphyrin to DNA Probed by Circular and Linear Dichroism Spectroscopies. J Phys Chem B 2012; 116:12510-21. [DOI: 10.1021/jp3081063] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Lindan Gong
- Department
of Chemistry, and ‡Department of Physics, Yeungnam University Gyeongsan City, Gyeong-buk, 712-749 Republic of Korea
| | - Inho Bae
- Department
of Chemistry, and ‡Department of Physics, Yeungnam University Gyeongsan City, Gyeong-buk, 712-749 Republic of Korea
| | - Seog K. Kim
- Department
of Chemistry, and ‡Department of Physics, Yeungnam University Gyeongsan City, Gyeong-buk, 712-749 Republic of Korea
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Study of ProtoPorphyrin IX Elimination by Body Excreta: A new Noninvasive Cancer Diagnostic Method? J Fluoresc 2012; 23:131-5. [DOI: 10.1007/s10895-012-1126-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2012] [Accepted: 09/02/2012] [Indexed: 10/27/2022]
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Kim YR, Gong L, Park J, Jang YJ, Kim J, Kim SK. Systematic Investigation on the Central Metal Ion Dependent Binding Geometry of M-meso-Tetrakis(N-methylpyridinium-4-yl)porphyrin to DNA and Their Efficiency as an Acceptor in DNA-Mediated Energy Transfer. J Phys Chem B 2012; 116:2330-7. [DOI: 10.1021/jp212291r] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Young Rhan Kim
- Department of Chemistry, Yeungnam University, Dae-dong, Gyeongsan
City, Gyeong-buk, 712-749, Republic of Korea
| | - Lindan Gong
- Department of Chemistry, Yeungnam University, Dae-dong, Gyeongsan
City, Gyeong-buk, 712-749, Republic of Korea
| | - Jongjin Park
- Department of Chemistry, Yeungnam University, Dae-dong, Gyeongsan
City, Gyeong-buk, 712-749, Republic of Korea
| | - Yoon Jung Jang
- Department of Chemistry, Yeungnam University, Dae-dong, Gyeongsan
City, Gyeong-buk, 712-749, Republic of Korea
| | - Jinheung Kim
- Department of Chemistry
and Nano Science, Ewha Womans University, Seoul, 120-750, Republic of Korea
| | - Seog K. Kim
- Department of Chemistry, Yeungnam University, Dae-dong, Gyeongsan
City, Gyeong-buk, 712-749, Republic of Korea
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