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Zhao Y, Xiong H, Luo Y, Hu B, Wang J, Tang X, Wang Y, Shi X, Zhang Y, Rennenberg H. Long-term nitrogen fertilization alters the partitioning of amino acids between citrus leaves and fruits. FRONTIERS IN PLANT SCIENCE 2025; 15:1516000. [PMID: 39872200 PMCID: PMC11769974 DOI: 10.3389/fpls.2024.1516000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Academic Contribution Register] [Received: 10/23/2024] [Accepted: 12/20/2024] [Indexed: 01/29/2025]
Abstract
Introduction The growth of evergreen fruit trees is influenced by the interaction of soil nitrogen (N) and leaf amino acid contents. However, information on free amino acid contents in leaves of fruiting and non-fruiting branches during long-term N fertilizer application remains scarce. Methods Here, a four-year field experiment (2018-2021) in a citrus orchard revealed consistently lower total N and amino acid contents in leaves of fruiting compared to non-fruiting branches. Results and discussion Appropriate N fertilizer application increased free amino acid and total N contents in leaves of both types of branches and fruits, but excessive amounts led to decreases. Correlation analysis showed that, in the early stage of fruit development, leaves on both types of branches can meet the N requirements of the fruit (R²=0.77 for fruiting, R²=0.82 for non-fruiting). As fruits entered the swelling stage, a significant positive correlation emerged between fruiting branch leaves and fruit total N content (R²=0.68), while the R² for leaves on non-fruiting branches dropped to 0.47, indicating a shift in N supply towards leaves on fruiting branches. Proline and arginine are the most abundant amino acids in these leaves. At fruit maturity, these amino acids account for more than half of the total amino acids in the fruit (29.0% for proline and 22.2% for arginine), highlighting their crucial role in fruit development. Further research is needed to investigate amino acid transport and distribution mechanisms between citrus leaves and fruits.
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Affiliation(s)
- Yuanlai Zhao
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, Chongqing, China
| | - Huaye Xiong
- Citrus Research Institute, Southwest University, Chongqing, China
| | - Yayin Luo
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, Chongqing, China
| | - Bin Hu
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, Chongqing, China
| | - Jie Wang
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, Chongqing, China
| | - Xiaodong Tang
- Changshou District Agricultural Technology Research Service Center, Chongqing, China
| | - Yuehong Wang
- Hechuan District Grain and Oil Development Guidance Station, Chongqing, China
| | - Xiaojun Shi
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, Chongqing, China
- Beijing Changping Soil Quality National Observation and Research Station, Beijing, China
| | - Yueqiang Zhang
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, Chongqing, China
- Beijing Changping Soil Quality National Observation and Research Station, Beijing, China
| | - Heinz Rennenberg
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, Chongqing, China
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-Universität Freiburg Georges-Köhler-Allee, Freiburg, Germany
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Luo Y, Nan L. Genome-wide identification of high-affinity nitrate transporter 2 (NRT2) gene family under phytohormones and abiotic stresses in alfalfa (Medicago sativa). Sci Rep 2024; 14:31920. [PMID: 39738449 DOI: 10.1038/s41598-024-83438-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 04/13/2024] [Accepted: 12/16/2024] [Indexed: 01/02/2025] Open
Abstract
The high-affinity nitrate transporter 2 (NRT2) protein plays an important role in nitrate uptake and transport in plants. In this study, the NRT2s gene family were systematically analyzed in alfalfa. We identified three MsNRT2 genes from the genomic database. They were named MsNRT2.1-2.3 based on their chromosomal location. The phylogenetic tree revealed that NRT2 proteins were categorized into two main subgroups, which were further confirmed by their gene structure and conserved motifs. Three MsNRT2 genes distributed on 2 chromosomes. Furthermore, we studied the expression patterns of MsNRT2 genes in six tissues based on RNA-sequencing data from the Short Read Archive (SRA) database of NCBI, and the results showed that MsNRT2 genes were widely expressed in six tissues. After leaves and roots were treated with drought, salt, abscisic acid (ABA) and salicylic acid (SA) for 0-48 h, and we used quantitative RT-PCR to analyze the expression levels of MsNRT2 genes and the results showed that most of the MsNRT2 genes responded to these stresses. However, there are specific genes that play a role under specific treatment conditions. This result provides a basis for further research on the target genes. In summary, MsNRT2s play an irreplaceable role in the growth, development and stress response of alfalfa, and this study provides valuable information and theoretical basis for future research on MsNRT2 function.
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Affiliation(s)
- Yanyan Luo
- Pratacultural College, Key Laboratory of Grassland Ecosystem (Ministry of Education), Key Laboratory of Forage Gerplasm Innovation and New Variety Breeding of Ministry of Agriculture and Rural Affairs (Co-sponsored by Ministry and Province), Gansu Agricultural University, Lanzhou, 730070, Gansu, China
| | - Lili Nan
- Pratacultural College, Key Laboratory of Grassland Ecosystem (Ministry of Education), Key Laboratory of Forage Gerplasm Innovation and New Variety Breeding of Ministry of Agriculture and Rural Affairs (Co-sponsored by Ministry and Province), Gansu Agricultural University, Lanzhou, 730070, Gansu, China.
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3
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Massonnet C, Chuste PA, Zeller B, Tillard P, Gerard B, Cheraft L, Breda N, Maillard P. Does long-term drought or repeated defoliation affect seasonal leaf N cycling in young beech trees? TREE PHYSIOLOGY 2024; 44:tpae054. [PMID: 38769932 DOI: 10.1093/treephys/tpae054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 01/23/2024] [Revised: 05/14/2024] [Accepted: 05/17/2024] [Indexed: 05/22/2024]
Abstract
Forest trees adopt effective strategies to optimize nitrogen (N) use through internal N recycling. In the context of more recurrent environmental stresses due to climate change, the question remains of whether increased frequency of drought or defoliation threatens this internal N recycling strategy. We submitted 8-year-old beech trees to 2 years of either severe drought (Dro) or manual defoliation (Def) to create a state of N starvation. At the end of the second year before leaf senescence, we labeled the foliage of the Dro and Def trees, as well as that of control (Co) trees, with 15N-urea. Leaf N resorption, winter tree N storage (total N, 15N, amino acids, soluble proteins) and N remobilization in spring were evaluated for the three treatments. Defoliation and drought did not significantly impact foliar N resorption or N concentrations in organs in winter. Total N amounts in Def tree remained close to those in Co tree, but winter N was stored more in the branches than in the trunk and roots. Total N amount in Dro trees was drastically reduced (-55%), especially at the trunk level, but soluble protein concentrations increased in the trunk and fine roots compared with Co trees. During spring, 15N was mobilized from the trunk, branches and twigs of both Co and Def trees to support leaf growth. It was only provided through twig 15N remobilization in the Dro trees, thus resulting in extremely reduced Dro leaf N amounts. Our results suggest that stress-induced changes occur in N metabolism but with varying severity depending on the constraints: within-tree 15N transport and storage strategy changed in response to defoliation, whereas a soil water deficit induced a drastic reduction of the N amounts in all the tree organs. Consequently, N dysfunction could be involved in drought-induced beech tree mortality under the future climate.
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Affiliation(s)
- Catherine Massonnet
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Pierre-Antoine Chuste
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | | | - Pascal Tillard
- UMR 5004, Biochimie et Physiologie Moléculaire des Plantes, INRAE/CNRS/Montpellier SupAgro/Université Montpellier, Place Viala, 34060 Montpellier, Cedex 2, France
| | - Bastien Gerard
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Loucif Cheraft
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Nathalie Breda
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Pascale Maillard
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
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Li D, Wang J, Chen R, Chen J, Zong J, Li L, Hao D, Guo H. Review: Nitrogen acquisition, assimilation, and seasonal cycling in perennial grasses. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 342:112054. [PMID: 38423392 DOI: 10.1016/j.plantsci.2024.112054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 12/06/2023] [Revised: 01/19/2024] [Accepted: 02/26/2024] [Indexed: 03/02/2024]
Abstract
Perennial grasses seasonal nitrogen (N) cycle extends the residence and reuse time of N within the plant system, thereby enhancing N use efficiency. Currently, the mechanism of N metabolism has been extensively examined in model plants and annual grasses, and although perennial grasses exhibit similarities, they also possess distinct characteristics. Apart from assimilating and utilizing N throughout the growing season, perennial grasses also translocate N from aerial parts to perennial tissues, such as rhizomes, after autumn senescence. Subsequently, they remobilize the N from these perennial tissues to support new growth in the subsequent year, thereby ensuring their persistence. Previous studies indicate that the seasonal storage and remobilization of N in perennial grasses are not significantly associated with winter survival despite some amino acids and proteins associated with low temperature tolerance accumulating, but primarily with regrowth during the subsequent spring green-up stage. Further investigation can be conducted in perennial grasses to explore the correlation between stored N and dormant bud outgrowth in perennial tissues, such as rhizomes, during the spring green-up stage, building upon previous research on the relationship between N and axillary bud outgrowth in annual grasses. This exploration on seasonal N cycling in perennial grasses can offer valuable theoretical insights for new perennial grasses varieties with high N use efficiency through the application of gene editing and other advanced technologies.
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Affiliation(s)
- Dandan Li
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Jingjing Wang
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Rongrong Chen
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Jingbo Chen
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Junqin Zong
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Ling Li
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Dongli Hao
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Hailin Guo
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China.
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Xiong H, Luo Y, Zhao H, Wang J, Hu B, Yan C, Yao T, Zhang Y, Shi X, Rennenberg H. Integrated proteome and physiological traits reveal interactive mechanisms of new leaf growth and storage protein degradation with mature leaves of evergreen citrus trees. TREE PHYSIOLOGY 2024; 44:tpae001. [PMID: 38195893 DOI: 10.1093/treephys/tpae001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 04/26/2023] [Accepted: 12/29/2023] [Indexed: 01/11/2024]
Abstract
The growth of fruit trees depends on the nitrogen (N) remobilization in mature tissues and N acquisition from the soil. However, in evergreen mature citrus (Citrus reticulata Blanco) leaves, proteins with N storage functions and hub molecules involved in driving N remobilization remain largely unknown. Here, we combined proteome and physiological analyses to characterize the spatiotemporal mechanisms of growth of new leaves and storage protein degradation in mature leaves of citrus trees exposed to low-N and high-N fertilization in the field. Results show that the growth of new leaves is driven by remobilization of stored reserves, rather than N uptake by the roots. In this context, proline and arginine in mature leaves acted as N sources supporting the growth of new leaves in spring. Time-series analyses with gel electrophoresis and proteome analysis indicated that the mature autumn shoot leaves are probably the sites of storage protein synthesis, while the aspartic endopeptidase protein is related to the degradation of storage proteins in mature citrus leaves. Furthermore, bioinformatic analysis based on protein-protein interactions indicated that glutamate synthetase and ATP-citrate synthetase are hub proteins in N remobilization from mature citrus leaves. These results provide strong physiological data for seasonal optimization of N fertilizer application in citrus orchards.
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Affiliation(s)
- Huaye Xiong
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Yayin Luo
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Huanyu Zhao
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Jie Wang
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Bin Hu
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Chengquan Yan
- Citrus Research Institute, Southwest University, Xiema, Beibei District, 400712 Chongqing, P.R. China
| | - Tingshan Yao
- Citrus Research Institute, Southwest University, Xiema, Beibei District, 400712 Chongqing, P.R. China
| | - Yueqiang Zhang
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Xiaojun Shi
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
| | - Heinz Rennenberg
- Center of Molecular Ecophysiology (CMEP), College of Resources and Environment, Southwest University, No. 2, Tiansheng Road, Beibei District, 400715 Chongqing, P.R. China
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-Universität Freiburg, Georges-Köhler-Allee 53/54, 79110 Freiburg, Germany
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Hart AT, Landhäusser SM, Wiley E. Tracing carbon and nitrogen reserve remobilization during spring leaf flush and growth following defoliation. TREE PHYSIOLOGY 2024:tpae015. [PMID: 38281259 DOI: 10.1093/treephys/tpae015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Academic Contribution Register] [Indexed: 01/30/2024]
Abstract
Woody plants rely on the remobilization of carbon (C) and nitrogen (N) reserves to support growth and survival when resource demand exceeds supply at seasonally predictable times like spring leaf flush and following unpredictable disturbances like defoliation. However, we have a poor understanding of how reserves are regulated and whether distance between source and sink tissues affects remobilization. This leads to uncertainty about which reserves-and how much-are available to support plant functions like leaf growth. To better understand the source of remobilized reserves and constraints on their allocation, we created aspen saplings with organ-specific labeled reserves by using stable isotopes (13C,15N) and grafting unlabeled or labeled stems to labeled or unlabeled root stocks. We first determined which organs had imported root or stem-derived C and N reserves after spring leaf flush. We then further tested spatial and temporal variation in reserve remobilization and import by comparing 1) upper and lower canopy leaves, 2) early and late leaves, and 3) early flush and re-flush leaves after defoliation. During spring flush, remobilized root C and N reserves were preferentially allocated to sinks closer to the reserve source (i.e., lower vs upper canopy leaves). However, the reduced import of 13C in late versus early leaves indicates reliance on C reserves declined over time. Following defoliation, re-flush leaves imported the same proportion of root N as spring flush leaves, but they imported a lower proportion of root C. This lower import of reserve C suggests that, after defoliation, leaf re-flush rely more heavily on current photosynthate, which may explain the reduced leaf mass recovery of re-flush canopies (31% of initial leaf mass). The reduced reliance on reserves occurred even though roots retained significant starch concentrations (~5% dry wt), suggesting aspen prioritizes the maintenance of root reserves at the expense of fast canopy recovery.
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Affiliation(s)
- Ashley T Hart
- Department of Renewable Resources, University of Alberta, Edmonton, Alberta, Canada
| | - Simon M Landhäusser
- Department of Renewable Resources, University of Alberta, Edmonton, Alberta, Canada
| | - Erin Wiley
- Department of Biology, University of Central Arkansas, Conway, Arkansas, USA
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Zhang MJ, Fu Q, Chen MS, He H, Tang M, Ni J, Tao YB, Xu ZF. Characterization of the bark storage protein gene ( JcBSP) family in the perennial woody plant Jatropha curcas and the function of JcBSP1 in Arabidopsis thaliana. PeerJ 2022; 10:e12938. [PMID: 35186503 PMCID: PMC8833228 DOI: 10.7717/peerj.12938] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 11/10/2021] [Accepted: 01/24/2022] [Indexed: 01/11/2023] Open
Abstract
BACKGROUND Bark storage protein (BSP) plays an important role in seasonal nitrogen cycling in perennial deciduous trees. However, there is no report on the function of BSP in the perennial woody oil plant Jatropha curcas. METHODS In this study, we identified six members of JcBSP gene family in J. curcas genome. The patterns, seasonal changes, and responses to nitrogen treatment in gene expression of JcBSPs were detected by quantitative reverse transcription-polymerase chain reaction (qRT-PCR). Overexpression of JcBSP1 in transgenic Arabidopsis thaliana was driven by a constitutive cauliflower mosaic virus (CaMV) 35S RNA promoter. RESULTS JcBSP members were found to be expressed in various tissues, except seeds. The seasonal changes in the total protein concentration and JcBSP1 expression in the stems of J. curcas were positively correlated, as both increased in autumn and winter and decreased in spring and summer. In addition, the JcBSP1 expression in J. curcas seedlings treated with different concentrations of an NH4NO3 solution was positively correlated with the NH4NO3 concentration and application duration. Furthermore, JcBSP1 overexpression in Arabidopsis resulted in a phenotype of enlarged rosette leaves, flowers, and seeds, and significantly increased the seed weight and yield in transgenic plants.
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Affiliation(s)
- Ming-Jun Zhang
- School of Life Sciences, University of Science and Technology of China, Hefei, Anhui, China,CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China
| | - Qiantang Fu
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China
| | - Mao-Sheng Chen
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China
| | - Huiying He
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China
| | - Mingyong Tang
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China
| | - Jun Ni
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Forestry, Guangxi University, Nanning, Guangxi, China
| | - Yan-Bin Tao
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China
| | - Zeng-Fu Xu
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, China,State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Forestry, Guangxi University, Nanning, Guangxi, China
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Genome-wide identification of nitrate transporter 2 (NRT2) gene family and functional analysis of MeNRT2.2 in cassava (Manihot esculenta Crantz). Gene 2022; 809:146038. [PMID: 34688819 DOI: 10.1016/j.gene.2021.146038] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 06/13/2021] [Revised: 10/14/2021] [Accepted: 10/19/2021] [Indexed: 12/26/2022]
Abstract
Nitrate transporter 2 (NRT2) proteins play an important role in nitrate uptake and utilization in plants. The NRT2 family has been identified and functionally characterized in many plants. However, no systematic identification of NRT2 family members has been reported in cassava (Manihot esculenta Crantz). In this study, six MeNRT2 genes were identified from cassava genome and named as MeNRT2.1-2.6 according to their chromosomal locations. Phylogenetic tree showed that NRT2 proteins were divided into four main subgroups, which was further supported by their gene structure and conserved motifs. All six MeNRT2 genes are randomly distributed on 4 chromosomes (LG8, LG11, LG13, and LG17), two tandem duplicated genes (MeNRT2.3/MeNRT2.4) and a pair of segmental duplicated gene (MeNRT2.1/MeNRT2.2) was detected. Subsequently, expression profiles of MeNRT2 genes in eight different tissues and in response to nitrate deficient treatment were analyzed. The results showed that the MeNRT2 genes had differential expression patterns. All of MeNRT2 genes induced by nitrate deficiency, of them the MeNRT2.2 had the highest expression level after treatment. Arabidopis transformed with MeNRT2.2 gene showed higher fresh weight than wild type plants in response to N starvation, suggesting that MeNRT2.2 play important role in adapting to low nitrogen. Taken together, our results provide the reference for further analyses of the molecular functions of the MeNRT2 gene family, but also some candidate genes for developing nitrogen efficient crops.
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Lebedev VG, Popova AA, Shestibratov KA. Genetic Engineering and Genome Editing for Improving Nitrogen Use Efficiency in Plants. Cells 2021; 10:cells10123303. [PMID: 34943810 PMCID: PMC8699818 DOI: 10.3390/cells10123303] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 10/29/2021] [Revised: 11/18/2021] [Accepted: 11/23/2021] [Indexed: 12/15/2022] Open
Abstract
Low nitrogen availability is one of the main limiting factors for plant growth and development, and high doses of N fertilizers are necessary to achieve high yields in agriculture. However, most N is not used by plants and pollutes the environment. This situation can be improved by enhancing the nitrogen use efficiency (NUE) in plants. NUE is a complex trait driven by multiple interactions between genetic and environmental factors, and its improvement requires a fundamental understanding of the key steps in plant N metabolism—uptake, assimilation, and remobilization. This review summarizes two decades of research into bioengineering modification of N metabolism to increase the biomass accumulation and yield in crops. The expression of structural and regulatory genes was most often altered using overexpression strategies, although RNAi and genome editing techniques were also used. Particular attention was paid to woody plants, which have great economic importance, play a crucial role in the ecosystems and have fundamental differences from herbaceous species. The review also considers the issue of unintended effects of transgenic plants with modified N metabolism, e.g., early flowering—a research topic which is currently receiving little attention. The future prospects of improving NUE in crops, essential for the development of sustainable agriculture, using various approaches and in the context of global climate change, are discussed.
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Affiliation(s)
- Vadim G. Lebedev
- Forest Biotechnology Group, Branch of the Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 142290 Pushchino, Russia;
- Correspondence:
| | - Anna A. Popova
- Department of Botany and Plant Physiology, Voronezh State University of Forestry and Technologies named after G.F. Morozov, 394087 Voronezh, Russia;
| | - Konstantin A. Shestibratov
- Forest Biotechnology Group, Branch of the Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 142290 Pushchino, Russia;
- Department of Botany and Plant Physiology, Voronezh State University of Forestry and Technologies named after G.F. Morozov, 394087 Voronezh, Russia;
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Liu MY, Tang D, Shi Y, Ma L, Zhang Q, Ruan J. Foliar N Application on Tea Plant at Its Dormancy Stage Increases the N Concentration of Mature Leaves and Improves the Quality and Yield of Spring Tea. FRONTIERS IN PLANT SCIENCE 2021; 12:753086. [PMID: 34721481 PMCID: PMC8553938 DOI: 10.3389/fpls.2021.753086] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Academic Contribution Register] [Received: 08/04/2021] [Accepted: 09/20/2021] [Indexed: 06/13/2023]
Abstract
Over 30% of the Chinese tea plantation is supplied with excess fertilizer, especially nitrogen (N) fertilizer. Whether or not foliar N application on tea plants at the dormancy stage could improve the quality of spring tea and be a complementary strategy to reduce soil fertilization level remains unclear. In this study, the effects of foliar N application on tea plants were investigated by testing the types of fertilizers and their application times, and by applying foliar N under a reduced soil fertilization level using field and 15N-labeling pot experiments. Results showed that the foliar N application of amino acid liquid fertilizer two times at the winter dormancy stage was enough to significantly increase the N concentration of the mature leaves and improved the quality of spring tea. The foliar application of 2% urea or liquid amino acid fertilizer two times at the winter dormancy stage and two times at the spring dormancy stage showed the best performance in tea plants among the other foliar N fertilization methods, as it reduced the soil fertilization levels in tea plantations without decreasing the total N concentration of the mature leaves or deteriorating the quality of spring tea. Therefore, foliar N application on tea plants at its dormancy stage increases the N concentration of the mature leaves, improves the quality and yield of spring tea, and could be a complementary strategy to reduce soil fertilization levels.
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Affiliation(s)
- Mei-Ya Liu
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture and Rural Affairs), Hangzhou, China
| | - Dandan Tang
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture and Rural Affairs), Hangzhou, China
| | - Yuanzhi Shi
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture and Rural Affairs), Hangzhou, China
| | - Lifeng Ma
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture and Rural Affairs), Hangzhou, China
| | - Qunfeng Zhang
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture and Rural Affairs), Hangzhou, China
| | - Jianyun Ruan
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture and Rural Affairs), Hangzhou, China
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van Bel AJE. The plant axis as the command centre for (re)distribution of sucrose and amino acids. JOURNAL OF PLANT PHYSIOLOGY 2021; 265:153488. [PMID: 34416599 DOI: 10.1016/j.jplph.2021.153488] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 05/09/2021] [Revised: 07/13/2021] [Accepted: 08/01/2021] [Indexed: 06/13/2023]
Abstract
Along with the increase in size required for optimal colonization of terrestrial niches, channels for bidirectional bulk transport of materials in land plants evolved during a period of about 100 million years. These transport systems are essentially still in operation - though perfected over the following 400 million years - and make use of hydrostatic differentials. Substances are accumulated or released at the loading and unloading ends, respectively, of the transport channels. The intermediate stretch between the channel termini is bifunctional and executes orchestrated release and retrieval of solutes. Analyses of anatomical and physiological data demonstrate that the release/retrieval zone extends deeper into sources and sinks than is commonly thought and covers usually much more than 99% of the translocation stretch. This review sketches the significance of events in the intermediate stretch for distribution of organic materials over the plant body. Net leakage from the channels does not only serve maintenance and growth of tissues along the pathway, but also diurnal, short-term or seasonal storage of reserve materials, and balanced distribution of organic C- and N-compounds over axial and terminal sinks. Release and retrieval are controlled by plasma-membrane transporters at the vessel/parenchyma interface in the contact pits along xylem vessels and by plasma-membrane transporters at the interface between companion cells and phloem parenchyma along sieve tubes. The xylem-to-phloem pathway vice versa is a bifacial, radially oriented system comprising a symplasmic pathway, of which entrance and exit are controlled at specific membrane checkpoints, and a parallel apoplasmic pathway. A broad range of specific sucrose and amino-acid transporters are deployed at the checkpoint plasma membranes. SUCs, SUTs, STPs, SWEETs, and AAPs, LTHs, CATs are localized to the plasma membranes in question, both in monocots and eudicots. Presence of Umamits in monocots is uncertain. There is some evidence for endo- and exocytosis at the vessel/parenchyma interface supplementary to the transporter-mediated uptake and release. Actions of transporters at the checkpoints are equally decisive for storage and distribution of amino acids and sucrose in monocots and eudicots, but storage and distribution patterns may differ between both taxa. While the majority of reserves is sequestered in vascular parenchyma cells in dicots, lack of space in monocot vasculature urges "outsourcing" of storage in ground parenchyma around the translocation path. In perennial dicots, specialized radial pathways (rays) include the sites for seasonal alternation of storage and mobilization. In dicots, apoplasmic phloem loading and a correlated low rate of release along the path would favour supply with photoassimilates of terminal sinks, while symplasmic phloem loading and a correlated higher rate of release along the path favours supply of axial sinks and transfer to the xylem. The balance between the resource acquisition by terminal and axial sinks is an important determinant of relative growth rate and, hence, for the fitness of plants in various habitats. Body enlargement as the evolutionary drive for emergence of vascular systems and mass transport propelled by hydrostatic differentials.
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Affiliation(s)
- Aart J E van Bel
- Institute of Phythopathology, Centre for BioSystems, Land Use and Nutrition, Justus-Liebig University, Heinrich-Buff-Ring 26-32, D-35392, Giessen, Germany.
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12
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Liu J, Sun Y, Liu W, Tan Z, Jiang J, Li Y. Association of spectroscopically determined leaf nutrition related traits and breeding selection in Sassafras tzumu. PLANT METHODS 2021; 17:33. [PMID: 33789705 PMCID: PMC8010991 DOI: 10.1186/s13007-021-00734-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Academic Contribution Register] [Received: 07/24/2020] [Accepted: 03/19/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Plant traits related to nutrition have an influential role in tree growth, tree production and nutrient cycling. Therefore, the breeding program should consider the genetics of the traits. However, the measurement methods could seriously affect the progress of breeding selection program. In this study, we tested the ability of spectroscopy to quantify the specific leaf nutrition traits including anthocyanins (ANTH), flavonoids (FLAV) and nitrogen balance index (NBI), and estimated the genetic variation of these leaf traits based on the spectroscopic predicted data. Fresh leaves of Sassafras tzumu were selected for spectral collection and ANTH, FLAV and NBI concentrations measurement by standard analytical methods. Partial least squares regression (PLSR), five spectra pre-processing methods, and four variable selection algorisms were conducted for the optimal model selection. Each trait model was simulated 200 times for error estimation. RESULTS The standard normal variate (SNV) to the ANTH model and 1st derivatives to the FLAV and NBI models, combined with significant Multivariate Correlation (sMC) algorithm variable selection are finally regarded as the best performance models. The ANTH model produced the highest accuracy of prediction with a mean R2 of 0.72 and mean RMSE of 0.10%, followed by FLAV and NBI model (mean R2 of 0.58, mean RMSE of 0.11% and mean R2 of 0.44, mean RMSE of 0.04%). High heritability was found for ANTH, FLAV and NBI with h2 of 0.78, 0.58 and 0.61 respectively. It shows that it is beneficial and possible for breeding selection to the improvement of leaf nutrition traits. CONCLUSIONS Spectroscopy can successfully characterize the leaf nutrition traits in living tree leaves and the ability to simultaneous multiple plant traits provides a promising and high-throughput tool for the quick analysis of large size samples and serves for genetic breeding program.
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Affiliation(s)
- Jun Liu
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, 311400, Zhejiang, China
| | - Yang Sun
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, 311400, Zhejiang, China
- College of Forestry, Nanjing Forestry University, Nanjing, People's Republic of China
| | - Wenjian Liu
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, 311400, Zhejiang, China
| | - Zifeng Tan
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, 311400, Zhejiang, China
| | - Jingmin Jiang
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, 311400, Zhejiang, China
| | - Yanjie Li
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Fuyang, 311400, Zhejiang, China.
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Zhao L, Chen P, Liu P, Song Y, Zhang D. Genetic Effects and Expression Patterns of the Nitrate Transporter (NRT) Gene Family in Populus tomentosa. FRONTIERS IN PLANT SCIENCE 2021; 12:661635. [PMID: 34054902 PMCID: PMC8155728 DOI: 10.3389/fpls.2021.661635] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 02/01/2021] [Accepted: 04/06/2021] [Indexed: 05/22/2023]
Abstract
Nitrate is an important source of nitrogen for poplar trees. The nitrate transporter (NRT) gene family is generally responsible for nitrate absorption and distribution. However, few analyses of the genetic effects and expression patterns of NRT family members have been conducted in woody plants. Here, using poplar as a model, we identified and characterized 98 members of the PtoNRT gene family. We calculated the phylogenetic and evolutionary relationships of the PtoNRT family and identified poplar-specific NRT genes and their expression patterns. To construct a core triple genetic network (association - gene expression - phenotype) for leaf nitrogen content, a candidate gene family association study, weighted gene co-expression network analysis (WGCNA), and mapping of expression quantitative trait nucleotides (eQTNs) were combined, using data from 435 unrelated Populus. tomentosa individuals. PtoNRT genes exhibited distinct expression patterns between twelve tissues, circadian rhythm points, and stress responses. The association study showed that genotype combinations of allelic variations of three PtoNRT genes had a strong effect on leaf nitrogen content. WGCNA produced two co-expression modules containing PtoNRT genes. We also found that four PtoNRT genes defined thousands of eQTL signals. WGCNA and eQTL provided comprehensive analysis of poplar nitrogen-related regulatory factors, including MYB17 and WRKY21. NRT genes were found to be regulated by five plant hormones, among which abscisic acid was the main regulator. Our study provides new insights into the NRT gene family in poplar and enables the exploitation of novel genetic factors to improve the nitrate use efficiency of trees.
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Affiliation(s)
- Lei Zhao
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
| | - Panfei Chen
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
| | - Peng Liu
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
| | - Yuepeng Song
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
| | - Deqiang Zhang
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- *Correspondence: Deqiang Zhang,
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14
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Castro-Rodríguez V, Ávila C, Cánovas FM. Getting more bark for your buck: nitrogen economy of deciduous forest trees. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:4369-4372. [PMID: 32710786 DOI: 10.1093/jxb/eraa238] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Indexed: 06/11/2023]
Abstract
This article comments on:
Li G, Lin R, Egekwu C, Blakeslee J, Lin J, Pettengill E, Murphy AS, Peer WA, Islam N, Babst BA, Gao F, Komarov S, Tai Y-C, Coleman GD. 2020. Seasonal nitrogen remobilization and the role of auxin transport in poplar trees. Journal of Experimental Botany 71, 4512–4530.
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Affiliation(s)
- Vanessa Castro-Rodríguez
- Grupo de Biología Molecular y Biotecnología de Plantas (BIO-114), Facultad de Ciencias, Universidad de Málaga, Málaga, Spain
| | - Concepción Ávila
- Grupo de Biología Molecular y Biotecnología de Plantas (BIO-114), Facultad de Ciencias, Universidad de Málaga, Málaga, Spain
| | - Francisco M Cánovas
- Grupo de Biología Molecular y Biotecnología de Plantas (BIO-114), Facultad de Ciencias, Universidad de Málaga, Málaga, Spain
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Li G, Lin R, Egekwu C, Blakeslee J, Lin J, Pettengill E, Murphy AS, Peer WA, Islam N, Babst BA, Gao F, Komarov S, Tai YC, Coleman GD. Seasonal nitrogen remobilization and the role of auxin transport in poplar trees. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:4512-4530. [PMID: 32161967 PMCID: PMC7382381 DOI: 10.1093/jxb/eraa130] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 11/23/2019] [Accepted: 03/06/2020] [Indexed: 05/31/2023]
Abstract
Seasonal nitrogen (N) cycling in Populus, involves bark storage proteins (BSPs) that accumulate in bark phloem parenchyma in the autumn and decline when shoot growth resumes in the spring. Little is known about the contribution of BSPs to growth or the signals regulating N remobilization from BSPs. Knockdown of BSP accumulation via RNAi and N sink manipulations were used to understand how BSP storage influences shoot growth. Reduced accumulation of BSPs delayed bud break and reduced shoot growth following dormancy. Further, 13N tracer studies also showed that BSP accumulation is an important factor in N partitioning from senescing leaves to bark. Thus, BSP accumulation has a role in N remobilization during N partitioning both from senescing leaves to bark and from bark to expanding shoots once growth commences following dormancy. The bark transcriptome during BSP catabolism and N remobilization was enriched in genes associated with auxin transport and signaling, and manipulation of the source of auxin or auxin transport revealed a role for auxin in regulating BSP catabolism and N remobilization. Therefore, N remobilization appears to be regulated by auxin produced in expanding buds and shoots that is transported to bark where it regulates protease gene expression and BSP catabolism.
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Affiliation(s)
- Gen Li
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
| | - Rongshoung Lin
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
| | - Chioma Egekwu
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
| | - Joshua Blakeslee
- OARDC Metabolite Analysis Center, Department of Horticulture and Crop Science, The Ohio State University, Wooster, USA
| | - Jinshan Lin
- OARDC Metabolite Analysis Center, Department of Horticulture and Crop Science, The Ohio State University, Wooster, USA
| | - Emily Pettengill
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
| | - Angus S Murphy
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
| | - Wendy A Peer
- Department of Environmental Science and Technology, University of Maryland, College Park, USA
| | - Nazrul Islam
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
| | - Benjamin A Babst
- College of Forestry, Agriculture and Natural Resources, University of Arkansas at Monticello, Monticello, USA
| | - Fei Gao
- College of Forestry, Agriculture and Natural Resources, University of Arkansas at Monticello, Monticello, USA
| | - Sergey Komarov
- Department of Radiology, Washington University in St. Louis, St. Louis, USA
| | - Yuan-Chuan Tai
- Department of Radiology, Washington University in St. Louis, St. Louis, USA
| | - Gary D Coleman
- Department of Plant Science and Landscape Architecture, University of Maryland, College Park, USA
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Kolega S, Miras-Moreno B, Buffagni V, Lucini L, Valentinuzzi F, Maver M, Mimmo T, Trevisan M, Pii Y, Cesco S. Nutraceutical Profiles of Two Hydroponically Grown Sweet Basil Cultivars as Affected by the Composition of the Nutrient Solution and the Inoculation With Azospirillum brasilense. FRONTIERS IN PLANT SCIENCE 2020; 11:596000. [PMID: 33224175 PMCID: PMC7674207 DOI: 10.3389/fpls.2020.596000] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 08/18/2020] [Accepted: 10/09/2020] [Indexed: 05/14/2023]
Abstract
Sweet basil (Ocimum basilicum L.) is one of the most produced aromatic herbs in the world, exploiting hydroponic systems. It has been widely assessed that macronutrients, like nitrogen (N) and sulfur (S), can strongly affect the organoleptic qualities of agricultural products, thus influencing their nutraceutical value. In addition, plant-growth-promoting rhizobacteria (PGPR) have been shown to affect plant growth and quality. Azospirillum brasilense is a PGPR able to colonize the root system of different crops, promoting their growth and development and influencing the acquisition of mineral nutrients. On the bases of these observations, we aimed at investigating the impact of both mineral nutrients supply and rhizobacteria inoculation on the nutraceutical value on two different sweet basil varieties, i.e., Genovese and Red Rubin. To these objectives, basil plants have been grown in hydroponics, with nutrient solutions fortified for the concentration of either S or N, supplied as SO4 2- or NO3 -, respectively. In addition, plants were either non-inoculated or inoculated with A. brasilense. At harvest, basil plants were assessed for the yield and the nutraceutical properties of the edible parts. The cultivation of basil plants in the fortified nutrient solutions showed a general increasing trend in the accumulation of the fresh biomass, albeit the inoculation with A. brasilense did not further promote the growth. The metabolomic analyses disclosed a strong effect of treatments on the differential accumulation of metabolites in basil leaves, producing the modulation of more than 400 compounds belonging to the secondary metabolism, as phenylpropanoids, isoprenoids, alkaloids, several flavonoids, and terpenoids. The primary metabolism that resulted was also influenced by the treatments showing changes in the fatty acid, carbohydrates, and amino acids metabolism. The amino acid analysis revealed that the treatments induced an increase in arginine (Arg) content in the leaves, which has been shown to have beneficial effects on human health. In conclusion, between the two cultivars studied, Red Rubin displayed the most positive effect in terms of nutritional value, which was further enhanced following A. brasilense inoculation.
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Affiliation(s)
- Simun Kolega
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bolzano, Italy
- Department of Ecology, Agronomy and Aquaculture, University of Zadar, Zadar, Croatia
| | - Begona Miras-Moreno
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Valentina Buffagni
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Luigi Lucini
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Fabio Valentinuzzi
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bolzano, Italy
| | - Mauro Maver
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bolzano, Italy
| | - Tanja Mimmo
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bolzano, Italy
- Competence Centre for Plant Health, Free University of Bozen/Bolzano, Bolzano, Italy
| | - Marco Trevisan
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Youry Pii
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bolzano, Italy
- *Correspondence: Youry Pii,
| | - Stefano Cesco
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Bolzano, Italy
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17
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Babst BA, Gao F, Acosta-Gamboa LM, Karve A, Schueller MJ, Lorence A. Three NPF genes in Arabidopsis are necessary for normal nitrogen cycling under low nitrogen stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 143:1-10. [PMID: 31473400 DOI: 10.1016/j.plaphy.2019.08.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 05/23/2019] [Revised: 08/10/2019] [Accepted: 08/19/2019] [Indexed: 06/10/2023]
Abstract
Internal nitrogen (N) cycling is crucial to N use efficiency. For example, N may be remobilized from older, shaded leaves to young leaves near the apex that receive more direct sunlight, where the N can be used more effectively for photosynthesis. Yet our understanding of the mechanisms and regulation of N transport is limited. To identify relevant transporters in Arabidopsis, fifteen transporter knockout mutants were screened for defects in leaf N export using nitrogen-13 (13N) administered as 13NH3 gas to leaves. We found that three nitrate/peptide transporter family (NPF) genes were necessary for normal leaf N export under low N but not adequate soil N availability, including AtNPF7.1, which has not been previously characterized. High-throughput phenotyping revealed altered leaf area and chlorophyll fluorescence relative to wild-type plants. High AtNPF7.1 expression in flowers and large flower stalks of Atnpf7.1 mutants in low N suggests that AtNPF7.1 influences leaf N export via sink-to-source feedback, perhaps via a role in sensing plant internal N-status. We also identified previously unreported phenotypes for the mutants of the other two NPF transporters that indicate possible roles in N sensing networks.
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Affiliation(s)
- Benjamin A Babst
- Biosciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA; Arkansas Forest Resources Center, Division of Agriculture, University of Arkansas, Monticello, AR, 71656, USA.
| | - Fei Gao
- Biosciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA; Arkansas Forest Resources Center, Division of Agriculture, University of Arkansas, Monticello, AR, 71656, USA
| | - Lucia M Acosta-Gamboa
- Phenomics Facility, Arkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72467, USA
| | - Abhijit Karve
- Biosciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Michael J Schueller
- Biosciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Argelia Lorence
- Phenomics Facility, Arkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72467, USA; Department of Chemistry and Physics, Arkansas State University, P.O. Box 419, State University, AR, 72467, USA
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18
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Zhang L, Li G, Dong G, Wang M, Di D, Kronzucker HJ, Shi W. Characterization and comparison of nitrate fluxes in Tamarix ramosissima and cotton roots under simulated drought conditions. TREE PHYSIOLOGY 2019; 39:628-640. [PMID: 30566674 DOI: 10.1093/treephys/tpy126] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 05/10/2018] [Revised: 09/13/2018] [Accepted: 11/23/2018] [Indexed: 05/24/2023]
Abstract
Tamarix ramosissima Ledeb., a major host plant for the parasitic angiosperm Cistanche tubulosa, and known for its unique drought tolerance, has significant ecological and economic benefits. However, the mechanisms of nitrogen acquisition by the T. ramosissima root system under drought have remained uncharacterized. Here, uptake of nitrate (NO3-) in various regions of the root system was measured in T. ramosissima using Non-invasive Micro-test Technology at the cellular level, and using a 15NO3--enrichment technique at the whole-root level. These results were compared with responses in the model system cotton (Gossypium hirsutum L.). Tamarix ramosissima had lower net NO3- influx and a significantly lower Km (the apparent Michalis-Menten constant; 8.5 μM) for NO3- uptake than cotton under normal conditions. Upon simulated drought conditions, using polyethylene glycol (PEG), NO3- flux in cotton switched from net influx to net efflux, with a substantive peak in the white zone (WZ) of the root. There were no significant NO3- influx signals observed in the WZ of T. ramosissima under control conditions, whereas PEG treatment significantly enhanced NO3- influx in the WZ of T. ramosissima. The effect of PEG application on NO3- fluxes was highly localized, and the increase in net NO3- influx in response to PEG stimulation was also found in C. tubulosa-inoculated T. ramosissima. Consistently, root nitrogen (N) content and root biomass were higher in T. ramosissima than in cotton under PEG treatment. Our study provides insights into NO3- uptake and the influence of C. tubulosa inoculation in T. ramosissima roots during acclimation to PEG-induced drought stress and provides guidelines for silvicultural practice and for breeding of T. ramosissima under coupled conditions of soil drought and N deficiency.
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Affiliation(s)
- Lin Zhang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, No. 71 East Beijing Road, Nanjing, China
- University of the Chinese Academy of Sciences, No.19(A) Yuquan Road, Shijingshan District, Beijing , China
| | - Guangjie Li
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, No. 71 East Beijing Road, Nanjing, China
| | - Gangqiang Dong
- Amway (China) Botanical R&D Center, Wuxi, Jiangsu, China
| | - Meng Wang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, No. 71 East Beijing Road, Nanjing, China
| | - Dongwei Di
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, No. 71 East Beijing Road, Nanjing, China
| | - Herbert J Kronzucker
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC, Australia
| | - Weiming Shi
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, No. 71 East Beijing Road, Nanjing, China
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Babst BA, Ferrieri R, Schueller M. Detecting Rapid Changes in Carbon Transport and Partitioning with Carbon-11 ( 11C). Methods Mol Biol 2019; 2014:163-176. [PMID: 31197795 DOI: 10.1007/978-1-4939-9562-2_14] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 01/04/2023]
Abstract
Noninvasive techniques to measure phloem transport of carbon will be crucial to efforts to engineer improved crop yields, which are highly dependent on carbon partitioning. Phloem, which is buried in the interior of the plant, is highly sensitive to tissue damage. Here we describe nondestructive methods using carbon-11, fed to leaves as 11CO2, as a tracer to track export of recently fixed carbon from leaves, transport speed through the phloem, and distribution or partitioning throughout the plant.
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Affiliation(s)
- Benjamin A Babst
- Arkansas Forest Resources Center, Monticello, AR, USA. .,University of Arkansas at Monticello, College of Forestry, Agriculture, and Natural Resources, Monticello, AR, USA.
| | - Richard Ferrieri
- Missouri Research Reactor Center and Department of Chemistry, University of Missouri, Columbia, MO, USA
| | - Michael Schueller
- Department of Chemistry, University of Missouri, Missouri Research Reactor Center, Columbia, MO, USA
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Cánovas FM, Cañas RA, de la Torre FN, Pascual MB, Castro-Rodríguez V, Avila C. Nitrogen Metabolism and Biomass Production in Forest Trees. FRONTIERS IN PLANT SCIENCE 2018; 9:1449. [PMID: 30323829 PMCID: PMC6172323 DOI: 10.3389/fpls.2018.01449] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 06/25/2018] [Accepted: 09/12/2018] [Indexed: 05/20/2023]
Abstract
Low nitrogen (N) availability is a major limiting factor for tree growth and development. N uptake, assimilation, storage and remobilization are key processes in the economy of this essential nutrient, and its efficient metabolic use largely determines vascular development, tree productivity and biomass production. Recently, advances have been made that improve our knowledge about the molecular regulation of acquisition, assimilation and internal recycling of N in forest trees. In poplar, a model tree widely used for molecular and functional studies, the biosynthesis of glutamine plays a central role in N metabolism, influencing multiple pathways both in primary and secondary metabolism. Moreover, the molecular regulation of glutamine biosynthesis is particularly relevant for accumulation of N reserves during dormancy and in N remobilization that takes place at the onset of the next growing season. The characterization of transgenic poplars overexpressing structural and regulatory genes involved in glutamine biosynthesis has provided insights into how glutamine metabolism may influence the N economy and biomass production in forest trees. Here, a general overview of this research topic is outlined, recent progress are analyzed and challenges for future research are discussed.
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Affiliation(s)
- Francisco M. Cánovas
- Grupo de Biología Molecular y Biotecnología de Plantas, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Málaga, Spain
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