1
|
Xu F, Su T, Zhang X, Qiu L, Yang X, Koizuka N, Arimura S, Hu Z, Zhang M, Yang J. Editing of ORF138 restores fertility of Ogura cytoplasmic male sterile broccoli via mitoTALENs. PLANT BIOTECHNOLOGY JOURNAL 2024; 22:1325-1334. [PMID: 38213067 PMCID: PMC11022808 DOI: 10.1111/pbi.14268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 11/03/2023] [Accepted: 11/29/2023] [Indexed: 01/13/2024]
Abstract
Cytoplasmic male sterility (CMS), encoded by the mitochondrial open reading frames (ORFs), has long been used to economically produce crop hybrids. However, the utilization of CMS also hinders the exploitation of sterility and fertility variation in the absence of a restorer line, which in turn narrows the genetic background and reduces biodiversity. Here, we used a mitochondrial targeted transcription activator-like effector nuclease (mitoTALENs) to knock out ORF138 from the Ogura CMS broccoli hybrid. The knockout was confirmed by the amplification and re-sequencing read mapping to the mitochondrial genome. As a result, knockout of ORF138 restored the fertility of the CMS hybrid, and simultaneously manifested a cold-sensitive male sterility. ORF138 depletion is stably inherited to the next generation, allowing for direct use in the breeding process. In addition, we proposed a highly reliable and cost-effective toolkit to accelerate the life cycle of fertile lines from CMS-derived broccoli hybrids. By applying the k-mean clustering and interaction network analysis, we identified the central gene networks involved in the fertility restoration and cold-sensitive male sterility. Our study enables mitochondrial genome editing via mitoTALENs in Brassicaceae vegetable crops and provides evidence that the sex production machinery and its temperature-responsive ability are regulated by the mitochondria.
Collapse
Affiliation(s)
- Fengyuan Xu
- Hainan Institute, Zhejiang UniversityYazhou Bay Science and Technology CitySanyaChina
- Laboratory of Germplasm Innovation and Molecular Breeding, Institute of Vegetable ScienceZhejiang UniversityHangzhouChina
| | - Tongbing Su
- Beijing Vegetable Research CenterBeijing Academy of Agriculture and Forestry SciencesBeijingChina
| | - Xiaochen Zhang
- Hainan Institute, Zhejiang UniversityYazhou Bay Science and Technology CitySanyaChina
| | - Lei Qiu
- College of Horticulture and Landscape ArchitectureYangzhou UniversityYangzhouChina
| | - Xiaodong Yang
- College of Horticulture and Landscape ArchitectureYangzhou UniversityYangzhouChina
| | | | - Shin‐ichi Arimura
- Laboratory of Plant Molecular Genetics, Graduate School of Agricultural and Life SciencesThe University of TokyoTokyoJapan
| | - Zhongyuan Hu
- Hainan Institute, Zhejiang UniversityYazhou Bay Science and Technology CitySanyaChina
- Laboratory of Germplasm Innovation and Molecular Breeding, Institute of Vegetable ScienceZhejiang UniversityHangzhouChina
- Key Laboratory of Horticultural Plant Growth and DevelopmentMinistry of Agriculture and Rural AffairsHangzhouChina
| | - Mingfang Zhang
- Hainan Institute, Zhejiang UniversityYazhou Bay Science and Technology CitySanyaChina
- Laboratory of Germplasm Innovation and Molecular Breeding, Institute of Vegetable ScienceZhejiang UniversityHangzhouChina
- Key Laboratory of Horticultural Plant Growth and DevelopmentMinistry of Agriculture and Rural AffairsHangzhouChina
| | - Jinghua Yang
- Hainan Institute, Zhejiang UniversityYazhou Bay Science and Technology CitySanyaChina
- Laboratory of Germplasm Innovation and Molecular Breeding, Institute of Vegetable ScienceZhejiang UniversityHangzhouChina
- Key Laboratory of Horticultural Plant Growth and DevelopmentMinistry of Agriculture and Rural AffairsHangzhouChina
| |
Collapse
|
3
|
Zhu Y, Kuang W, Leng J, Wang X, Qiu L, Kong X, Wang Y, Zhao Q. The apple 14-3-3 gene MdGRF6 negatively regulates salt tolerance. FRONTIERS IN PLANT SCIENCE 2023; 14:1161539. [PMID: 37077638 PMCID: PMC10106762 DOI: 10.3389/fpls.2023.1161539] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 03/22/2023] [Indexed: 05/03/2023]
Abstract
The 14-3-3 (GRF, general regulatory factor) regulatory proteins are highly conserved and are widely distributed throughout the eukaryotes. They are involved in the growth and development of organisms via target protein interactions. Although many plant 14-3-3 proteins were identified in response to stresses, little is known about their involvement in salt tolerance in apples. In our study, nineteen apple 14-3-3 proteins were cloned and identified. The transcript levels of Md14-3-3 genes were either up or down-regulated in response to salinity treatments. Specifically, the transcript level of MdGRF6 (a member of the Md14-3-3 genes family) decreased due to salt stress treatment. The phenotypes of transgenic tobacco lines and wild-type (WT) did not affect plant growth under normal conditions. However, the germination rate and salt tolerance of transgenic tobacco was lower compared to the WT. Transgenic tobacco demonstrated decreased salt tolerance. The transgenic apple calli overexpressing MdGRF6 exhibited greater sensitivity to salt stress compared to the WT plants, whereas the MdGRF6-RNAi transgenic apple calli improved salt stress tolerance. Moreover, the salt stress-related genes (MdSOS2, MdSOS3, MdNHX1, MdATK2/3, MdCBL-1, MdMYB46, MdWRKY30, and MdHB-7) were more strongly down-regulated in MdGRF6-OE transgenic apple calli lines than in the WT when subjected to salt stress treatment. Taken together, these results provide new insights into the roles of 14-3-3 protein MdGRF6 in modulating salt responses in plants.
Collapse
Affiliation(s)
- Yuqing Zhu
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
| | - Wei Kuang
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
| | - Jun Leng
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
| | - Xue Wang
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
| | - Linlin Qiu
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
| | - Xiangyue Kong
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
| | - Yongzhang Wang
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
- *Correspondence: Qiang Zhao, ; Yongzhang Wang,
| | - Qiang Zhao
- College of Horticulture, Qingdao Agricultural University, Qingdao, Shandong, China
- Engineering Laboratory of Genetic Improvement of Horticultural Crops of Shandong Province, Qingdao Agricultural University, Qingdao, Shandong, China
- Laboratory of Quality & Safety Risk Assessment for Fruit (Qingdao), Ministry of Agriculture and Rural Affairs, Qingdao Agricultural University, Qingdao, Shandong, China
- Qingdao Key Laboratory of Modern Agriculture Quality and Safety Engineering, Qingdao Agricultural University, Qingdao, Shandong, China
- *Correspondence: Qiang Zhao, ; Yongzhang Wang,
| |
Collapse
|