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Synthesis, structure and antibacterial activity of dinitrosyl iron complexes (DNICs) dimers functionalized with 5-(nitrophenyl) -4-H-1,2,4-triazole-3-thiolyls. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115822] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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2
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Aldoshin SM, Bozhenko KV, Utenyshev AN, Sanina NA, Emel'yanova NS. Formation of supramolecular synthons in the crystalline structure of the dinitrosyl iron complexes with aliphatic thiourea ligands. J Mol Model 2020; 26:330. [PMID: 33150462 DOI: 10.1007/s00894-020-04594-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Accepted: 10/28/2020] [Indexed: 11/28/2022]
Abstract
By means of quantum-chemical calculations using Density Functional Theory, Quantum Theory of Atoms in Molecules, and Natural Bond Orbitals, theoretical modeling of intermolecular interactions has been performed for eight nitrosyl iron complexes with aliphatic thiourea ligands, which was aimed at discovering the presence of the NO…NO intermolecular interactions and at studying the possibility of the NO…NO supramolecular synthon formation in their crystalline structure for explaining their unusual magnetic properties. Such interactions were shown to be either stacking or T-like interactions, depending on the relative position of nitrosyl ligands and energetically corresponding to Van der Waals bonds. Mainly LP(O), π (NO), and π*(NO) orbitals in various combinations participate in their formation, with π (FeN), π(FeО), and LP(N) orbitals hardly being participants. The involvement of the NO bond orbitals results in quenching the orbital moment of the NO groups. If NO groups are isolated from intermolecular interactions, they can preserve the unquenched orbital moment.
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Affiliation(s)
- S M Aldoshin
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation.,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991
| | - K V Bozhenko
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation.,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991
| | - A N Utenyshev
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation
| | - N A Sanina
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation.,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991.,Scientific and Educational Center "Medical Chemistry" of Moscow State Regional University, 141014 Mytishchi Region, st. Vera Voloshina, 24, Moscow, Russian Federation
| | - N S Emel'yanova
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation. .,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991.
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Coordination-Induced Self-Assembly of a Heteroleptic Paddlewheel-Type Dirhodium Complex. CRYSTALS 2020. [DOI: 10.3390/cryst10020085] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
A novel heteroleptic paddlewheel-type dirhodium (Rh2) complex [Rh2(O2CCH3)3(PABC)] (1; PABC = para-aminobenzenecarboxylate), which has an amino group as a potential donor site for coordination with the metal ion, was synthesized and characterized by 1H NMR, ESI-TOF-MS, infrared spectra, and elemental analysis. The slow evaporation of N,N-dimethylformamide (DMF)-dissolved 1 produces the purple-colored crystalline polymeric species [Rh2(O2CCH3)3 (PABC)(DMF)]n (1P). Single-crystal and powder X-ray diffraction analyses, as well as thermo-gravimetric analysis, clarified that 1P formed a one-dimensional polymeric structure, in which the two axial sites of the Rh2 ion in 1P are coordinated by a DMF molecule and an amino group of the PABC ligand of the neighboring molecule 1, by coordination-induced self-assembly (polymerization) with an Rh-amino bond. The reversible structural change (self-assembly and disassembly transformations) between the discrete species [Rh2(O2CCH3)3(PABC)(DMF)2] (1D; green solution) and the polymeric species 1P (purple solid) was accompanied by a color change, which easily occurred by the dissolution and evaporation procedures with DMF.
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Xie M, Wang L, Liu F, Zhang D, Gao J. Dynamic Conversion Between Se–N Covalent and Noncovalent Interactions. J Phys Chem A 2016; 120:9081-9088. [DOI: 10.1021/acs.jpca.6b08003] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Meng Xie
- School of Chemistry & Chemical Engineering, Shandong University, Jinan, 250100, People’s Republic of China
| | - Lili Wang
- Advanced
Research Center for Optics, Shandong University, Jinan, 250100, People’s Republic of China
| | - Fang Liu
- Hubei
Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, People’s Republic of China
| | - Dongju Zhang
- School of Chemistry & Chemical Engineering, Shandong University, Jinan, 250100, People’s Republic of China
| | - Jun Gao
- School of Chemistry & Chemical Engineering, Shandong University, Jinan, 250100, People’s Republic of China
- Hubei
Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan, 430070, People’s Republic of China
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Synthesis of Novel Ether Thionocarbamates and Study on Their Flotation Performance for Chalcopyrite. MINERALS 2016. [DOI: 10.3390/min6030097] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Chalkley MJ, Peters JC. A Triad of Highly Reduced, Linear Iron Nitrosyl Complexes: {FeNO}(8-10). Angew Chem Int Ed Engl 2016; 55:11995-8. [PMID: 27560776 PMCID: PMC5079689 DOI: 10.1002/anie.201605403] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2016] [Revised: 07/10/2016] [Indexed: 11/05/2022]
Abstract
Given the importance of Fe-NO complexes in both human biology and the global nitrogen cycle, there has been interest in understanding their diverse electronic structures. Herein a redox series of isolable iron nitrosyl complexes stabilized by a tris(phosphine)borane (TPB) ligand is described. These structurally characterized iron nitrosyl complexes reside in the following highly reduced Enemark-Feltham numbers: {FeNO}(8) , {FeNO}(9) , and {FeNO}(10) . These {FeNO}(8-10) compounds are each low-spin, and feature linear yet strongly activated nitric oxide ligands. Use of Mössbauer, EPR, NMR, UV/Vis, and IR spectroscopy, in conjunction with DFT calculations, provides insight into the electronic structures of this uncommon redox series of iron nitrosyl complexes. In particular, the data collectively suggest that {TPBFeNO}(8-10) are all remarkably covalent. This covalency is likely responsible for the stability of this system across three highly reduced redox states that correlate with unusually high Enemark-Feltham numbers.
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Affiliation(s)
- Matthew J Chalkley
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 E. California Blvd., Pasadena, CA, 91125, USA
| | - Jonas C Peters
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 E. California Blvd., Pasadena, CA, 91125, USA.
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8
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Emel’yanova NS, Shmatko NY, Sanina NA, Aldoshin SM. Quantum-chemical study of the Fe(NO)2 fragment in the cation of mononuclear nitrosyl iron complex [Fe(SC(NH2)2)2(NO)2]Сl·H2O. COMPUT THEOR CHEM 2015. [DOI: 10.1016/j.comptc.2015.02.004] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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9
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Bučinský L, Kucková L, Malček M, Kožíšek J, Biskupič S, Jayatilaka D, Büchel GE, Arion VB. Picture change error in quasirelativistic electron/spin density, Laplacian and bond critical points. Chem Phys 2014. [DOI: 10.1016/j.chemphys.2014.04.013] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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A density functional theory study of the Cu+·(NO) n complexes (n = 1–2). MONATSHEFTE FUR CHEMIE 2013. [DOI: 10.1007/s00706-013-1081-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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11
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Bučinský L, Büchel GE, Ponec R, Rapta P, Breza M, Kožíšek J, Gall M, Biskupič S, Fronc M, Schiessl K, Cuzan O, Prodius D, Turta C, Shova S, Zając DA, Arion VB. On the Electronic Structure ofmer,trans-[RuCl3(1H-indazole)2(NO)], a Hypothetical Metabolite of the Antitumor Drug Candidate KP1019: An Experimental and DFT Study. Eur J Inorg Chem 2013. [DOI: 10.1002/ejic.201201526] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Zheng W, Wu S, Zhao S, Geng Y, Jin J, Su Z, Fu Q. Carbonyl Amine/Schiff Base Ligands in Manganese Complexes: Theoretical Study on the Mechanism, Capability of NO Release. Inorg Chem 2012; 51:3972-80. [DOI: 10.1021/ic2011953] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Weili Zheng
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
| | - Shuixing Wu
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
| | - Shanshan Zhao
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
| | - Yun Geng
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
| | - Junling Jin
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
| | - Zhongmin Su
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
| | - Qiang Fu
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, Jilin, People’s Republic of China
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fac-/mer-[RuCl3(NO)(P–N)] (P–N=[o-(N,N-dimethylamino)phenyl]diphenylphosphine): Synthesis, characterization and DFT calculations. Inorganica Chim Acta 2011. [DOI: 10.1016/j.ica.2011.03.042] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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14
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Doro FG, Pepe IM, Galembeck SE, Carlos RM, da Rocha ZN, Bertotti M, Tfouni E. Reactivity, photolability, and computational studies of the ruthenium nitrosyl complex with a substituted cyclam fac-[Ru(NO)Cl2(κ3N4,N8,N11(1-carboxypropyl)cyclam)]Cl·H2O. Dalton Trans 2011; 40:6420-32. [DOI: 10.1039/c0dt01541e] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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15
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Sokolov AY, Sizova OV. Quantum-chemical study of trans influence in gold(I) linear complexes. RUSS J GEN CHEM+ 2010. [DOI: 10.1134/s1070363210070017] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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16
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Sizova OV, Skripnikov LV, Sokolov AY. Symmetry decomposition of quantum chemical bond orders. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/j.theochem.2008.08.021] [Citation(s) in RCA: 73] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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17
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Wolf J, Poli R, Xie JH, Nichols J, Xi B, Zavalij P, Doyle MP. Removal of Metal−Metal Bonding in a Dimetallic Paddlewheel Complex: Molecular and Electronic Structure of Bis(phenyl) Dirhodium(III) Carboxamidate Compounds. Organometallics 2008. [DOI: 10.1021/om800631b] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Joffrey Wolf
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Rinaldo Poli
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Jian-Hua Xie
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Jason Nichols
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Bin Xi
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Peter Zavalij
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Michael P. Doyle
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, Laboratoire de Chimie de Coordination, UPR CNRS 8241 Liée par Convention à l’Université Paul Sabatier et à l’Institut National Polytechnique de Toulouse, 205 Route de Narbonne, 31077 Toulouse Cedex 4, France, Institut Universitaire de France, 103, Boulevard Saint-Michel, 75005 Paris, France, and Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
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Lyubimova O, Sizova OV, Loschen C, Frenking G. The nature of the metal–nitric oxide bond in the [M(CN)5(NO)]q (M=Cr, Mn, Fe, Ru, Os, and Co) and trans-[Ru(NH3)4L(NO)]q (L=pyrazine, pyridine, N2, H2O, Cl−, CN−, ) complexes: A bond-energy decomposition analysis. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/j.theochem.2008.06.014] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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