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Tada K, Kitagawa Y. Issues on DFT+ U calculations of organic diradicals. Phys Chem Chem Phys 2023; 25:32110-32122. [PMID: 37983012 DOI: 10.1039/d3cp04187e] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2023]
Abstract
The diradical state is an important electronic state for understanding molecular functions and should be elucidated for the in silico design of functional molecules and their application to molecular devices. The density functional theory calculation with plane-wave basis and correction of the on-site Coulomb parameter U (DFT+U/plane-wave calculation) is a good candidate of high-throughput calculations of diradical-band interactions. However, it has not been investigated in detail to what extent the DFT+U/plane-wave calculation can be used to calculate organic diradicals with a high degree of accuracy. In the present study, using typical organic diradical molecules (bisphenalenyl molecules) as model systems, the discrepancy in the optimum U values between the two electronic states (open-shell singlet and triplet) that compose the diradical state is detected. The calculated results show that the reason for this U value discrepancy is the difference in electronic delocalisation due to π-conjugation between the open-shell singlet and triplet states, and that the effect of U discrepancy becomes large as diradical character decreases. This indicates that it is necessary to investigate the U value discrepancy with reference to the calculated results by more accurate methods or to experimental values when calculating organic diradicals with low diradical character. For this investigation, the local magnetic moments, unpaired beta electron numbers, and effective magnetic exchange integral values can be used as reference values. For the effective magnetic exchange integral values, the effects of U discrepancy are partially cancelled out. However, because the effects may not be completely offset, care should be taken when using the effective magnetic exchange integral value as a reference. Furthermore, a comparison of DFT+U and hybrid-DFT calculations shows that the DFT+U underestimates the HOMO-LUMO gap of bisphenalenyls, although a qualitative discussion of the gap is possible.
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Affiliation(s)
- Kohei Tada
- Research Institute of Electrochemical Energy, Department of Energy and Environment (RIECEN), National Institute of Advanced Industrial Science and Technology (AIST), 1-8-31 Midorigaoka, Ikeda, Osaka 563-8577, Japan.
| | - Yasutaka Kitagawa
- Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
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Tada K, Yamanaka S, Kawakami T, Kitagawa Y, Okumura M, Yamaguchi K, Tanaka S. Estimation of spin contamination errors in DFT/plane-wave calculations of solid materials using approximate spin projection scheme. Chem Phys Lett 2021. [DOI: 10.1016/j.cplett.2020.138291] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Tada K, Hayashi A, Maruyama T, Koga H, Yamanaka S, Okumura M, Tanaka S. Effect of surface interactions on spin contamination errors of homogeneous spin dimers, chains, and films: model calculations of Au/MgO and Au/BaO systems. Mol Phys 2020. [DOI: 10.1080/00268976.2020.1791989] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Kohei Tada
- Research Institute of Electrochemical Energy, Department of Energy and Environment, National Institute of Advanced Industrial Science and Technology (AIST), Ikeda, Japan
| | - Akihide Hayashi
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Tomohiro Maruyama
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Hiroaki Koga
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Japan
- Research Organization for Information Science and Technology (RIST), Tokyo, Japan
- Element Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto, Japan
| | - Shusuke Yamanaka
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Mitsutaka Okumura
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Japan
- Element Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto, Japan
| | - Shingo Tanaka
- Research Institute of Electrochemical Energy, Department of Energy and Environment, National Institute of Advanced Industrial Science and Technology (AIST), Ikeda, Japan
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Tada K, Kawakami T, Tanaka S, Okumura M, Yamaguchi K. Clarification of the Relationship between the Magnetic and Conductive Properties of Infinite Chains in Trioxotriangulene Radical Crystals by Spin‐Projected DFT/Plane‐Wave Calculations. ADVANCED THEORY AND SIMULATIONS 2020. [DOI: 10.1002/adts.202000050] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Kohei Tada
- Research Institute of Electrochemical EnergyDepartment of Energy and Environment (RIECEN)National Institute of Advanced Industrial Science and Technology (AIST) Ikeda Osaka 563‐8577 Japan
| | - Takashi Kawakami
- Department of ChemistryGraduate School of ScienceOsaka University Toyonaka Osaka 560‐0043 Japan
- Riken Center for Computational Science Kobe Hyogo 650‐0047 Japan
| | - Shingo Tanaka
- Research Institute of Electrochemical EnergyDepartment of Energy and Environment (RIECEN)National Institute of Advanced Industrial Science and Technology (AIST) Ikeda Osaka 563‐8577 Japan
| | - Mitsutaka Okumura
- Department of ChemistryGraduate School of ScienceOsaka University Toyonaka Osaka 560‐0043 Japan
- Elements Strategy Initiative for Catalysts and Batteries (ESICB)Kyoto University Kyoto 615‐8245 Japan
| | - Kizashi Yamaguchi
- Riken Center for Computational Science Kobe Hyogo 650‐0047 Japan
- The Institute of Scientific and Industrial ResearchOsaka University Ibaraki Osaka 567‐0047 Japan
- NanoScience Design CenterOsaka University Toyonaka Osaka 560‐8531 Japan
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Tada K, Kawakami T, Kitagawa Y, Okumura M, Yamaguchi K, Tanaka S. Comparison of Effective Exchange Integrals of H-H and H-He-H Chains vs. Single Molecules: A Theoretical Study. CHEM LETT 2020. [DOI: 10.1246/cl.190806] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Kohei Tada
- Research Institute of Electrochemical Energy, National Institute of Advanced Industrial Science and Technology (AIST), 1-8-31 Midorigaoka, Ikeda, Osaka 563-8577, Japan
| | - Takashi Kawakami
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Riken Center for Computational Science, Kobe, Hyogo 650-0047, Japan
| | - Yasutaka Kitagawa
- Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Mitsutaka Okumura
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Kyoto 615-8245, Japan
| | - Kizashi Yamaguchi
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Riken Center for Computational Science, Kobe, Hyogo 650-0047, Japan
- The Institute of Scientific and Industrial Research, Osaka University, Ibaraki, Osaka 567-0047, Japan
- NanoScience Design Center, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Shingo Tanaka
- Research Institute of Electrochemical Energy, National Institute of Advanced Industrial Science and Technology (AIST), 1-8-31 Midorigaoka, Ikeda, Osaka 563-8577, Japan
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Ikeue T, Sawada N, Matsumoto N, Miyazaki A, Sugimori T, Koikawa M, Hiromitsu I, Yoshino K, Mikuriya M, Kataoka Y, Handa M. Synthesis and magnetic properties of an annulated dinuclear copper(II) phthalocyanine peripherally having 2,6-dimethylphenoxy substituents. J PORPHYR PHTHALOCYA 2014. [DOI: 10.1142/s1088424614500485] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
A dinuclear copper(II) phthalocyanine complex with 12 2,6-dimethylphenoxyl groups at the peripheral positions of the [ CuPc ]2 framework, where [ CuPc ] units are linked by a common annulated benzene ring to give the planar dinuclear structure, was prepared and characterized. The introduced bulky 2,6-dimethylphenoxyl groups were revealed to effectively suppress the aggregation of the dinuclear complex in the toluene solution, showing a considerably red-shifted Q-band at 838 nm. The EPR spectrum (measured in the frozen toluene solution at 15 K) and temperature-dependent magnetic moment indicated the existence of antiferromagnetic interaction between the copper(II) ions. The exchange integral J was estimated to be -1.8 cm-1 using Bleaney Bowers equation for the S1 = S2 = 1/2 system. The long-range interaction ( Cu – Cu distance = 10.7 Å) through the common annulated benzene ring between two [ CuPc ] units was confirmed by the DFT calculation result.
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Affiliation(s)
- Takahisa Ikeue
- Department of Chemistry, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
| | - Naoko Sawada
- Department of Chemistry, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
| | - Naomi Matsumoto
- Department of Chemistry, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
| | - Ayaka Miyazaki
- Department of Chemistry, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
| | - Tamotsu Sugimori
- Division of Chemistry, Graduate School of Medicine and Pharmaceutical Science, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan
| | - Masayuki Koikawa
- Department of Chemistry and Applied Chemistry, Graduate School of Science and Engineering, Saga University, 1 Honjo, Saga 840-8502, Japan
| | - Ichiro Hiromitsu
- Department of Physics and Materials Science, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
| | - Katsumi Yoshino
- Shimane Institute for Industrial Technology, 1 Hokuryo, Matsue, Shimane 690-0816, Japan
| | - Masahiro Mikuriya
- Department of Chemistry and Research Center for Coordination Molecule-Based Devices, School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda 669-1337, Japan
| | - Yusuke Kataoka
- Department of Chemistry, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
| | - Makoto Handa
- Department of Chemistry, Graduate School of Science and Engineering, Shimane University, 1060 Nishikawatsu, Matsue 690-8504, Japan
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