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Data on solubilization, identification, and thermal stability of human Presenilin-2. Data Brief 2018; 17:626-630. [PMID: 29552611 PMCID: PMC5852265 DOI: 10.1016/j.dib.2018.01.039] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2017] [Revised: 10/05/2017] [Accepted: 01/16/2018] [Indexed: 11/24/2022] Open
Abstract
The data presented here are related to the research article entitled “Expression, purification, and preliminary characterization of human presenilin-2" [1]. Human Presenilin-2 is the catalytic subunit of γ-secretase and a possible calcium leakage channel (Kimberly et al., 2000; Tu et al., 2006) [2], [3]. HisPS2 which was obtained by overexpression in E. coli strain C43 (DE3) was extracted by detergent solubilisation. The sample isolation efficiency by detergents and the protein identification by mass spectrometry and western blot are described. This data article describes the near and far UV circular dichroism measurements and the data deconvolution in terms of secondary structure at 4 and 98 °C. Also, a refolding spectrum is presented. The raw CD spectra used for deconvolution of the helix and stand segments and average length are deposited into Protein Circular Dichroism Data Bank with PCDDBid: CD0005962000 (4 °C far UV), CD0005963000 (98 °C far UV), CD0005964000 (back to 4 °C far UV) and CD0005965000 (4 °C near UV CD).
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Yang G, Yu K, Kaitatzi CS, Singh A, Labahn J. Influence of solubilization and AD-mutations on stability and structure of human presenilins. Sci Rep 2017; 7:17970. [PMID: 29269939 PMCID: PMC5740079 DOI: 10.1038/s41598-017-18313-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2017] [Accepted: 12/08/2017] [Indexed: 12/23/2022] Open
Abstract
Presenilin (PS1 or PS2) functions as the catalytic subunit of γ-secretase, which produces the toxic amyloid beta peptides in Alzheimer’s disease (AD). The dependence of folding and structural stability of PSs on the lipophilic environment and mutation were investigated by far UV CD spectroscopy. The secondary structure content and stability of PS2 depended on the lipophilic environment. PS2 undergoes a temperature-dependent structural transition from α-helical to β-structure at 331 K. The restructured protein formed structures which tested positive in spectroscopic amyloid fibrils assays. The AD mutant PS1L266F, PS1L424V and PS1ΔE9 displayed reduced stability which supports a proposed ‘loss of function’ mechanism of AD based on protein instability. The exon 9 coded sequence in the inhibitory loop of the zymogen was found to be required for the modulation of the thermal stability of PS1 by the lipophilic environment.
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Affiliation(s)
- Ge Yang
- Centre for Structural Systems Biology (CSSB), CSSB-FZJ, Notkestr. 85, 22607, Hamburg, Germany.,Institute of Complex Systems-Structural Biochemistry (ICS-6), Forschungszentrum Jülich, Wilhelm-Johnen-Str., 52425, Jülich, Germany
| | - Kun Yu
- Centre for Structural Systems Biology (CSSB), CSSB-FZJ, Notkestr. 85, 22607, Hamburg, Germany.,Institute of Complex Systems-Structural Biochemistry (ICS-6), Forschungszentrum Jülich, Wilhelm-Johnen-Str., 52425, Jülich, Germany
| | - Christina-Symina Kaitatzi
- Centre for Structural Systems Biology (CSSB), CSSB-FZJ, Notkestr. 85, 22607, Hamburg, Germany.,Physics Department, University of Patras, University Campus, 26504, Rio Achaia, Greece
| | - Abhilasha Singh
- Centre for Structural Systems Biology (CSSB), CSSB-FZJ, Notkestr. 85, 22607, Hamburg, Germany.,Institute of Complex Systems-Structural Biochemistry (ICS-6), Forschungszentrum Jülich, Wilhelm-Johnen-Str., 52425, Jülich, Germany
| | - Jörg Labahn
- Centre for Structural Systems Biology (CSSB), CSSB-FZJ, Notkestr. 85, 22607, Hamburg, Germany. .,Institute of Complex Systems-Structural Biochemistry (ICS-6), Forschungszentrum Jülich, Wilhelm-Johnen-Str., 52425, Jülich, Germany. .,Institut für Physikalische Biologie, Heinrich-Heine-University Düsseldorf, Universitätsstraße 1, 40225, Düsseldorf, Germany.
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