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Serdyuk OP, Abdullatypov AV, Smolygina LD, Ashikhmin AA, Bolshakov MA. Simultaneous functioning of different light-harvesting complexes-a strategy of adaptation of purple bacterium Rhodopseudomonas palustris to low illumination conditions. PeerJ 2023; 11:e14769. [PMID: 36743963 PMCID: PMC9897067 DOI: 10.7717/peerj.14769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 12/29/2022] [Indexed: 02/03/2023] Open
Abstract
Novel peripheral light-harvesting (LH) complex designated as LL LH2 was isolated along with LH4 complex from Rhodopseudomonas palustris cells grown under low light intensity (LL). FPLC-MS/MS allowed to reveal PucABd and PucBabc apoproteins in LL LH2 complex, which is different from previously described LH4 complex containing PucABd, PucABa and PucBb. The main carotenoids in LL LH2 complex were rhodopin and 3,4-didehydrorhodopin. Three-dimensional modeling demonstrated which amino acid residues of all the β-subunits could interact with carotenoids (Car) and bacteriochlorophyll a (BChl a). Analysis of amino acid sequences of α-subunits of both LL complexes showed presence of different C-terminal motifs, IESSVNVG in αa subunit and IESSIKAV in αd subunit, in the same positions of C-termini, which could reflect different retention force of LL LH2 and LH4 on hydroxyl apatite, facilitating successful isolation of these complexes. Differences of these LL complexes in protein and carotenoid composition, in efficiency of energy transfer from Car to BChl a, which is two times lower in LL LH2 than in LH4, allow to assign it to a novel type of light-harvesting complex in Rhodopseudomonas palustris.
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Affiliation(s)
- Olga Petrovna Serdyuk
- Institute of Basic Biological Problems of the Russian Academy of Sciences—A Separate Subdivision of PSCBR RAS (IBBP RAS), Pushchino, Moscow Region, Russian Federation
| | - Azat Vadimovich Abdullatypov
- Institute of Basic Biological Problems of the Russian Academy of Sciences—A Separate Subdivision of PSCBR RAS (IBBP RAS), Pushchino, Moscow Region, Russian Federation
| | - Lidiya Dmitrievna Smolygina
- Institute of Basic Biological Problems of the Russian Academy of Sciences—A Separate Subdivision of PSCBR RAS (IBBP RAS), Pushchino, Moscow Region, Russian Federation
| | - Aleksandr Aleksandrovich Ashikhmin
- Institute of Basic Biological Problems of the Russian Academy of Sciences—A Separate Subdivision of PSCBR RAS (IBBP RAS), Pushchino, Moscow Region, Russian Federation
| | - Maxim Alexandrovich Bolshakov
- Institute of Basic Biological Problems of the Russian Academy of Sciences—A Separate Subdivision of PSCBR RAS (IBBP RAS), Pushchino, Moscow Region, Russian Federation
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Purple bacteria screening for photoautohydrogenotrophic food production: Are new H 2-fed isolates faster and nutritionally better than photoheterotrophically obtained reference species? N Biotechnol 2022; 72:38-47. [PMID: 36049649 DOI: 10.1016/j.nbt.2022.08.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 08/26/2022] [Accepted: 08/28/2022] [Indexed: 12/14/2022]
Abstract
Photoautohydrogenotrophic enrichments of wastewater treatment microbiomes were performed to obtain hypothetically high-potential specialist species for biotechnological applications. From these enrichment cultures, ten photoautohydrogenotrophic species were isolated: six Rhodopseudomonas species, three Rubrivivax members and Rhodobacter blasticus. The performance of these isolates was compared to three commonly studied, and originally photoheterotrophically enriched species (Rhodopseudomonas palustris, Rhodobacter capsulatus and Rhodobacter sphaeroides), designated as reference species. Repeated subcultivations were applied to improve the initial poor performance of the isolates (acclimation effect), which resulted in increases in both maximum growth rate and protein productivity. However, the maximum growth rate of the reference species remained 3-7 times higher compared to the isolates (0.42-0.84 d-1 at 28 °C), while protein productivities remained 1.5-1.7 times higher. This indicated that H2-based enrichment did not result in photoautohydrogenotrophic specialists, suggesting that the reference species are more suitable for intensified biomass and protein production. On the other hand, the isolates were able to provide equally high protein quality profiles as the references species, providing full dietary essential amino acid matches for human food. Lastly, the effect of metabolic carbon/electron switching (back and forth between auto- to heterotrophic conditions) initially boosted µmax when returning to photoautohydrogenotrophic conditions. However, the switch negatively impacted lag phase, protein productivities and pigment contents. In the case of protein productivity, the acquired acclimation was partially lost with decreases of up to 44 % and 40 % respectively for isolates and reference species. Finally, the three reference species, and specifically Rh. capsulatus, remained the most suitable candidate(s) for further biotechnological development.
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Spanoghe J, Vermeir P, Vlaeminck SE. Microbial food from light, carbon dioxide and hydrogen gas: Kinetic, stoichiometric and nutritional potential of three purple bacteria. BIORESOURCE TECHNOLOGY 2021; 337:125364. [PMID: 34120062 DOI: 10.1016/j.biortech.2021.125364] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Revised: 05/28/2021] [Accepted: 05/29/2021] [Indexed: 06/12/2023]
Abstract
The urgency for a protein transition towards more sustainable solutions is one of the major societal challenges. Microbial protein is one of the alternative routes, in which land- and fossil-free production should be targeted. The photohydrogenotrophic growth of purple bacteria, which builds on the H2- and CO2-economy, is unexplored for its microbial protein potential. The three tested species (Rhodobacter capsulatus, Rhodobacter sphaeroides and Rhodopseudomonas palustris) obtained promising growth rates (2.3-2.7 d-1 at 28°C) and protein productivities (0.09-0.12 g protein L-1 d-1), rendering them likely faster and more productive than microalgae. The achieved protein yields (2.6-2.9 g protein g-1 H2) transcended the ones of aerobic hydrogen oxidizing bacteria. Furthermore, all species provided full dietary protein matches for humans and their fatty acid content was dominated by vaccenic acid (82-86%). Given its kinetic and nutritional performance we recommend to consider Rhodobacter capsulatus as a high-potential sustainable source of microbial food.
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Affiliation(s)
- Janne Spanoghe
- Research Group of Sustainable Energy, Air and Water Technology (DuEL), Department of Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, Antwerpen 2020, Belgium
| | - Pieter Vermeir
- Laboratory for Chemical Analysis, Department of Green Chemistry and Technology, Ghent University, Valentin Vaerwyckweg 1, Gent 9000, Belgium
| | - Siegfried E Vlaeminck
- Research Group of Sustainable Energy, Air and Water Technology (DuEL), Department of Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, Antwerpen 2020, Belgium.
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Lopez-Romero J, Salgado-Manjarrez E, Torres L, Garcia-Peña EI. Enhanced carotenoid production by Rhodopseudomonas palustris ATCC 17001 under low light conditions. J Biotechnol 2020; 323:159-165. [PMID: 32827602 DOI: 10.1016/j.jbiotec.2020.08.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Revised: 07/08/2020] [Accepted: 08/17/2020] [Indexed: 01/06/2023]
Abstract
Carotenoids (CD) are biological pigments produced for commercial purposes. Therefore, it is necessary to study and determine the optimal conditions for increased CD production. There is no consensus in the literature about the conditions that increase CD production. Some authors stated that CD will be preferentially produced at low light intensities, at this adverse condition, microorganism will increase CD production as a survival response mechanism to get more energy. Other authors have mentioned that CD concentrations increase as the light intensity supplied increases, to avoid the overexposure of light and in turn photo-inhibition. Additionally, to increase the specific CD production is also necessary to increase the amount of biomass. In this work, the ammonium concentration (high (HAC) and low (LAC)) and the low light (LL) intensity effect on the CD production was evaluated. Data showed that a high CD-specific concentration of 8.8 mg/gcell was obtained by using R. palustris ATCC 17001 under HAC and LL intensity. CD production was similar at HAC and LAC, suggesting that the light intensity has a greater effect on the specific CD concentration than the nitrogen concentration. In general, the results showed a low biomass production compared to the literature, with high CD synthesis.
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Affiliation(s)
- J Lopez-Romero
- Bioprocesses Department, Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional P.O. Box 07340, Mexico City, Mexico
| | - E Salgado-Manjarrez
- Bioengineering Department, Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional P.O. Box 07340, Mexico City, Mexico
| | - L Torres
- Bioprocesses Department, Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional P.O. Box 07340, Mexico City, Mexico
| | - E I Garcia-Peña
- Bioprocesses Department, Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional P.O. Box 07340, Mexico City, Mexico.
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Zhao X, Zhao C, Yang S, Luo J. The Growth-promoting Mechanism of Unusual Spectroscopic Form of LH2 (LH4) from Rhodopseudomonas palustris CGA009 in Low Light. Photochem Photobiol 2019; 95:1369-1375. [PMID: 31230349 DOI: 10.1111/php.13134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2019] [Accepted: 06/12/2019] [Indexed: 11/29/2022]
Abstract
The experimental evidence for the growth-promoting mechanism and the efficiency of energy transfer (EET) of LH4 under low light are still not available. To elucidate the light adaption mechanism of LH4, we deleted the genes pucBAd involved in the synthesis of the α/β polypeptides of LH4 in Rhodopseudomonas palustris CGA009. Compared to wild strain, the growth rate of pucBAd mutant significantly decreased under low light, while there were no significant changes in the growth rate, the contents and compositions of photopigments, absorption spectra of cell lysates under high light. Moreover, the fluorescence quantum efficiency (FQE) was used to further compare the EET between LH2 and LH4. The FQE in LH4 increased up to 1.5-fold than did in LH2. Collectively, this study showed that LH4 could provide more and high energetic state photons for promoting bacterial phototrophic growth in response to low-light environment.
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Affiliation(s)
- Xiaolan Zhao
- Department of Bioengineering and Biotechnology, Huaqiao University, Xiamen, China
| | - Chungui Zhao
- Department of Bioengineering and Biotechnology, Huaqiao University, Xiamen, China
| | - Suping Yang
- Department of Bioengineering and Biotechnology, Huaqiao University, Xiamen, China
| | - Jiafu Luo
- Department of Bioengineering and Biotechnology, Huaqiao University, Xiamen, China
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Muzziotti D, Adessi A, Faraloni C, Torzillo G, De Philippis R. Acclimation strategy of Rhodopseudomonas palustris to high light irradiance. Microbiol Res 2017; 197:49-55. [PMID: 28219525 DOI: 10.1016/j.micres.2017.01.007] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Revised: 01/02/2017] [Accepted: 01/23/2017] [Indexed: 12/30/2022]
Abstract
The ability of Rhodopseudomonas palustris cells to rapidly acclimate to high light irradiance is an essential issue when cells are grown under sunlight. The aim of this study was to investigate the photo-acclimation process in Rhodopseudomonas palustris 42OL under different culturing conditions: (i) anaerobic (AnG), (ii) aerobic (AG), and (iii) under H2-producing (HP) conditions both at low (LL) and high light (HL) irradiances. The results obtained clearly showed that the photosynthetic unit was significantly affected by the light irradiance at which Rp. palustris 42OL was grown. The synthesis of carotenoids was affected by both illumination and culturing conditions. At LL, lycopene was the main carotenoid synthetized under all conditions tested, while at HL under HP conditions, it resulted the predominant carotenoid. Oppositely, under AnG and AG at HL, rhodovibrin was the major carotenoid detected. The increase in light intensity produced a deeper variation in light-harvesting complexes (LHC) ratio. These findings are important for understanding the ecological distribution of PNSB in natural environments, mostly characterized by high light intensities, and for its growth outdoors.
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Affiliation(s)
- Dayana Muzziotti
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144, Florence, Italy.
| | - Alessandra Adessi
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144, Florence, Italy; Institute of Chemistry of Organometallic Compounds (ICCOM), CNR, Via Madonna del Piano, 10-50019 Sesto Fiorentino, Florence, Italy.
| | - Cecilia Faraloni
- Institute of Ecosystem Study (ISE), CNR, Via Madonna del Piano, 10-50019 Sesto Fiorentino, Florence, Italy.
| | - Giuseppe Torzillo
- Institute of Ecosystem Study (ISE), CNR, Via Madonna del Piano, 10-50019 Sesto Fiorentino, Florence, Italy.
| | - Roberto De Philippis
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144, Florence, Italy; Institute of Chemistry of Organometallic Compounds (ICCOM), CNR, Via Madonna del Piano, 10-50019 Sesto Fiorentino, Florence, Italy.
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Muzziotti D, Adessi A, Faraloni C, Torzillo G, De Philippis R. H2 production in Rhodopseudomonas palustris as a way to cope with high light intensities. Res Microbiol 2016; 167:350-6. [PMID: 26916624 DOI: 10.1016/j.resmic.2016.02.003] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2015] [Revised: 02/08/2016] [Accepted: 02/08/2016] [Indexed: 10/22/2022]
Abstract
The ability of coping with the damaging effects of high light intensity represents an essential issue when purple non-sulfur bacteria (PNSB) are grown under direct sunlight for photobiological hydrogen production. This study was aimed at investigating whether H2 photo-evolution could represent, for Rhodopseudomonas palustris 42OL, a safety valve to dissipate an excess of reducing power generated under high light intensities. The physiological status of this strain was assessed under anaerobic (AnG) and aerobic (AG) growing conditions and under H2-producing (HP) conditions at low and high light intensities. The results obtained clearly showed that Fv/Fm ratio was significantly affected by the light intensity under which R. palustris 42OL cells were grown, under either AnG or AG conditions, while, under HP, it constantly remained at its highest value. The increase in light intensity significantly increased the H2 production rate, which showed a positive correlation with the maximum electron transfer rate (rETRmax). These findings are important for optimization of hydrogen production by PNSB under solar light.
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Affiliation(s)
- Dayana Muzziotti
- Department of Agrifood Production and Environmental Sciences, University of Florence, Piazzale Delle Cascine 24, I 50144, Florence, Italy.
| | - Alessandra Adessi
- Department of Agrifood Production and Environmental Sciences, University of Florence, Piazzale Delle Cascine 24, I 50144, Florence, Italy; Institute of Chemistry of Organometallic Compounds (ICCOM), CNR, Via Madonna del Piano, 10, 50019, Sesto Fiorentino, Florence, Italy.
| | - Cecilia Faraloni
- Institute of Ecosystem Study (ISE), CNR, Via Madonna del Piano, 10, 50019, Sesto Fiorentino, Florence, Italy.
| | - Giuseppe Torzillo
- Institute of Ecosystem Study (ISE), CNR, Via Madonna del Piano, 10, 50019, Sesto Fiorentino, Florence, Italy.
| | - Roberto De Philippis
- Department of Agrifood Production and Environmental Sciences, University of Florence, Piazzale Delle Cascine 24, I 50144, Florence, Italy; Institute of Chemistry of Organometallic Compounds (ICCOM), CNR, Via Madonna del Piano, 10, 50019, Sesto Fiorentino, Florence, Italy.
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