Automatic Classification of Breast Tumors Using Features Extracted from Magnetic Resonance Images

Segmentation of breast lesion using fuzzy thresholding and deep learning

Breast cancer is a major cause of morbidity and mortality in women. In breast cancer screening, Dynamic Contrast Enhanced Magnetic Resonance Imaging (DCE-MRI) has shown promise as a technique, providing enhanced temporal patterns of breast tissues. This study proposes an enhanced segmentation method for identifying breast lesions. The proposed experiments are done using the breast DCE-MRI images of 123 slices from seven patients in The Cancer Image Archive database. The three methods proposed and tested to segment the lesions are: i) Fuzzy C-mean Thresholding (FCMTH) with morphological operations ii) deep learning networks trained with original images iii) deep learning networks trained with three types of preprocessed images: the core breast image, the filtered core breast image, and the fuzzy thresholded image. In this study, the deep learning networks are trained with preprocessed images generated from the FCMTH technique, resulting in higher segmentation accuracy. FCMTH achieves Dice and Jaccard coefficients of 0.8458 and 0.7471, while DeepLabv3+ with MobileNetv2 trained by preprocessed images achieves 0.9468 and 0.8990, respectively. Thus, the combination of deep learning and FCMTH techniques provides the best performance for lesion detection.

Graph neural network-based breast cancer diagnosis using ultrasound images with optimized graph construction integrating the medically significant features

PURPOSE

An automated computerized approach can aid radiologists in the early diagnosis of breast cancer. In this study, a novel method is proposed for classifying breast tumors into benign and malignant, based on the ultrasound images through a Graph Neural Network (GNN) model utilizing clinically significant features.

METHOD

Ten informative features are extracted from the region of interest (ROI), based on the radiologists' diagnosis markers. The significance of the features is evaluated using density plot and T test statistical analysis method. A feature table is generated where each row represents individual image, considered as node, and the edges between the nodes are denoted by calculating the Spearman correlation coefficient. A graph dataset is generated and fed into the GNN model. The model is configured through ablation study and Bayesian optimization. The optimized model is then evaluated with different correlation thresholds for getting the highest performance with a shallow graph. The performance consistency is validated with k-fold cross validation. The impact of utilizing ROIs and handcrafted features for breast tumor classification is evaluated by comparing the model's performance with Histogram of Oriented Gradients (HOG) descriptor features from the entire ultrasound image. Lastly, a clustering-based analysis is performed to generate a new filtered graph, considering weak and strong relationships of the nodes, based on the similarities.

RESULTS

The results indicate that with a threshold value of 0.95, the GNN model achieves the highest test accuracy of 99.48%, precision and recall of 100%, and F1 score of 99.28%, reducing the number of edges by 85.5%. The GNN model's performance is 86.91%, considering no threshold value for the graph generated from HOG descriptor features. Different threshold values for the Spearman's correlation score are experimented with and the performance is compared. No significant differences are observed between the previous graph and the filtered graph.

CONCLUSION

The proposed approach might aid the radiologists in effective diagnosing and learning tumor pattern of breast cancer.

Design and analysis of a robust breast cancer diagnostic system based on multimode MR images

In this paper, we propose a Robust Breast Cancer Diagnostic System (RBCDS) based on multimode Magnetic Resonance (MR) images. Firstly, we design a four-mode convolutional neural network (FMS-PCNN) model to detect whether an image contains a tumor. The features of the images generated by different imaging modes are extracted and fused to form the basis of classification. This classification model utilizes both spatial pyramid pooling (SPP) and principal components analysis (PCA). SPP enables the network to process images of different sizes and avoids the loss due to image resizing. PCA can remove redundant information in the fused features of multi-sequence images. The best accuracy of this model achieves 94.6%. After that, we use our optimized U-Net (SU-Net) to segment the tumor from the entire image. The SU-Net achieves a mean dice coefficient (DC) value of 0.867. Finally, the performance of the system is analyzed to prove that this system is superior to the existing schemes.

Breast Tumor Diagnosis Using Finite-Element Modeling Based on Clinical in vivo Elastographic Data

OBJECTIVES

This study exploited finite-element modeling (FEM) to simulate breast tissue multicompression during ultrasound elastography to classify breast tumors based on their nonlinear biomechanical properties.

METHODS

Numeric simulations were first calculated by using 3-dimensional (3D) virtual models with an assumed tumor's geometric dimensions but with actual material properties to test and validate the FEM. Further numeric simulations were used to construct 3D models based on in vivo experimental data to verify our models. The models were designed for each individual in vivo case, emphasizing the geometry, position, and biomechanical properties of the breast tissue. At different compression levels, tissue strains were analyzed between the tumors and the background normal tissues to explore their nonlinearity and classify the tumor type. Tumor classification parameters were deduced by using a power-law relationship between the applied compressive forces and strain differences.

RESULTS

Classification parameters were compared between benign and malignant tumors, for which they were found to be statistically significant in classifying the tumor types (P < .05) by both the validation and verification of FEM. We compared the classification parameters between the in vivo and FEM classifications, for which they were found to be strongly correlated (R = 0.875; P < .001), with no statistical differences between their outcomes (P = .909).

CONCLUSIONS

Good agreement between the model outcomes and the in vivo diagnostics was reported. The implemented models were validated and verified. The introduced 3D modeling method may augment elastographic methods to preliminary classify breast tumors at an early stage.