A transcriptome analysis for 24-hour continuous sampled uterus reveals circadian regulation of the key pathways involved in eggshell formation of chicken

Gga-miR-34b-3p targets calbindin 1 to regulate cellular calcium ion homeostasis during eggshell calcification in chicken uterus

Improving eggshell quality in poultry is a key breeding goal, and identifying genetic markers that regulate eggshell calcification is essential for accelerating genetic advancements. This study focused on identifying the keys genes and molecular mechanisms that regulate eggshell calcification in the chicken uterus. The results showed that rapid eggshell mineralization began approximately 4 h after the egg enters the uterus, corresponding with observed morphological and histological changes in the uterine tissue. This is associated with increased energy demands and the production of ion transport proteins. Transcriptome analysis identified calbindin-1 (CALB1), ATPase plasma membrane Ca2+ transporting 2 (ATP2B2), and gga-miR-34b-3p as differentially expressed during eggshell formation. CALB1 and ATP2B2 were predicted targets of gga-miR-34b-3p, with roles in maintaining cellular calcium ion balance. A dual-luciferase reporter assay confirmed that gga-miR-34b-3p directly targeted inhibited CALB1 expression, although no significant changes in the luciferase activity were observed with the co-transfection of ATP2B2 wild-type and gga-miR-34b-3p mimic. Validation experiments showed significant increases in CALB1 and ATP2B2 mRNA and protein levels of CALB1 and ATP2B2 in the chicken uterus during eggshell calcification, with CALB1 predominantly expressed in the cytoplasm of uterine tubular gland cells. Furthermore, primary uterine tubular gland cells, identified using immunofluorescence for Cytokertin 18, demonstrated that silencing CALB1 and ATP2B2 increased intracellular Ca2+ concentration in these cells. Taken together, these findings suggest that the gga-miR-34b-3p/CALB1 regulatory axis maintains calcium ion homeostasis in the uterine tubular gland cells, to facilitate continuous and efficient eggshell calcification and thereby enhancing eggshell quality in chickens.

Implications from proteomic studies investigating circadian rhythm disorder-regulated neurodegenerative disease pathology

Neurodegenerative diseases (NDs) affect 15% of the world's population and are becoming an increasingly common cause of morbidity and mortality worldwide. Circadian rhythm disorders (CRDs) have been reported to be involved in the pathogenic regulation of various neurologic diseases, including Alzheimer's disease, Parkinson's disease, Huntington's disease, multiple sclerosis and amyotrophic lateral sclerosis. Proteomic technology is helpful to explore treatment targets for CRDs in patients with NDs. Here, we review the key differentially expressed (DE) proteins identified in previous proteomic studies investigating NDs, CRDs and associated models and the related pathways identified by enrichment analysis. Furthermore, we summarize the advantages and disadvantages of the above studies and propose new proteomic technologies for the precise study of circadian disorder-mediated regulation of ND pathology. This review provides a theoretical and technical reference for the precise study of circadian disorder-mediated regulation of ND pathology.

Circadian miR-218-5p targets gene CA2 to regulate uterine carbonic anhydrase activity during egg shell calcification

MicroRNAs (miRNAs) are involved in regulating the circadian clock. In our previous work, miR-218-5p was found to be a circadian miRNA in the chicken uterus, but its role in the eggshell formation process was not clear. In the present study, we found that the expression levels of miR-218-5p and two 2 predicted target genes carbonic anhydrase 2 (CA2) and neuronal PAS domain protein 2 (NPAS2) were oscillated in the chicken uterus. The results of dual-luciferase reporter gene assays in the present study demonstrated that miR-218-5p directly targeted the 3' untranslated regions of CA2 and NPAS2. miR-218-5p showed an opposite expression profile to CA2 within a 24 h cycle in the chicken uterus. Moreover, over-expression of miR-218-5p reduced the mRNA and protein expression of CA2, while miR-218-5p knockdown increased CA2 mRNA and protein expression. Overexpression of CA2 also significantly increased the activity of carbonic anhydrase Ⅱ (P < 0.05), whereas knockdown of CA2 decreased the activity of carbonic anhydrase Ⅱ. miR-218-5p influenced carbonic anhydrase activity via regulating the expression of CA2. These results demonstrated that clock-controlled miR-218-5p regulates carbonic anhydrase activity in the chicken uterus by targeting CA2 during eggshell formation.