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Dutilloy E, Arias AA, Richet N, Guise JF, Duban M, Leclere V, Selim S, Jacques P, Jacquard C, Clément C, Ait Barka E, Esmaeel Q. Bacillus velezensis BE2 controls wheat and barley diseases by direct antagonism and induced systemic resistance. Appl Microbiol Biotechnol 2024; 108:64. [PMID: 38189957 DOI: 10.1007/s00253-023-12864-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Revised: 10/19/2023] [Accepted: 11/05/2023] [Indexed: 01/09/2024]
Abstract
Wheat and barley rank among the main crops cultivated on a global scale, providing the essential nutritional foundation for both humans and animals. Nevertheless, these crops are vulnerable to several fungal diseases, such as Septoria tritici blotch and net blotch, which significantly reduce yields by adversely affecting leaves and grain quality. To mitigate the effect of these diseases, chemical fungicides have proven to be genuinely effective; however, they impose a serious environmental burden. Currently, biocontrol agents have attracted attention as a sustainable alternative to fungicides, offering an eco-friendly option. The study aimed to assess the efficacy of Bacillus velezensis BE2 in reducing disease symptoms caused by Zymoseptoria tritici and Pyrenophora teres. This bacterium exhibited significant antagonistic effects in vitro by suppressing fungal development when pathogens and the beneficial strain were in direct confrontation. These findings were subsequently confirmed through microscopic analysis, which illustrated the strain's capacity to inhibit spore germination and mycelial growth in both pathogens. Additionally, the study analysed the cell-free supernatant of the bacterium using UPLC-MS (ultra-performance liquid chromatography-mass spectrometry). The results revealed that strain BE2 produces, among other metabolites, different families of cyclic lipopeptides that may be involved in biocontrol. Furthermore, the beneficial effects of strain BE2 in planta were assessed by quantifying the fungal DNA content directly at the leaf level after bacterization, using two different application methods (foliar and drenching). The results indicated that applying the beneficial bacterium at the root level significantly reduced pathogens pressure. Finally, gene expression analysis of different markers showed that BE2 application induced a priming effect within the first hours after infection. KEY POINTS: • BE2 managed Z. tritici and P. teres by direct antagonism and induced systemic resistance. • Strain BE2 produced seven metabolite families, including three cyclic lipopeptides. • Application of strain BE2 at the root level triggered plant defense mechanisms.
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Affiliation(s)
- Emma Dutilloy
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Anthony Arguëlles Arias
- Microbial Processes and Interactions Laboratory, Terra Teaching and Research Center, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
| | - Nicolas Richet
- Université de Reims Champagne Ardenne, Plateau Technique Mobile de Cytométrie Environnementale MOBICYTE, URCA/INERIS, UFR Sciences Exactes Et Naturelles, Reims, France
| | - Jean-François Guise
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Matthieu Duban
- Université de Lille, Université de Liège, UMRT, 1158 BioEcoAgro, Institut Charles Viollette, 59000, Lille, France
| | - Valérie Leclere
- Université de Lille, Université de Liège, UMRT, 1158 BioEcoAgro, Institut Charles Viollette, 59000, Lille, France
| | - Sameh Selim
- AGHYLE UP 2018.C101, SFR Condorcet FR CNRS 3417, Institut Polytechnique UniLaSalle, 19 Rue Pierre Waguet, BP 30313, F-60026, Beauvais Cedex, France
| | - Philippe Jacques
- Microbial Processes and Interactions Laboratory, Terra Teaching and Research Center, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
| | - Cédric Jacquard
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Christophe Clément
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Essaïd Ait Barka
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Qassim Esmaeel
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France.
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Zhang J, Wu Y, Li W, Xie H, Li J, Miao Y, Yang Z, Zhou Y, Wang X. Effects of a novel Bacillus subtilis GXYX crude lipopeptide against Salmonella enterica serovar Typhimurium infection in mice. Heliyon 2024; 10:e28219. [PMID: 38524560 PMCID: PMC10958701 DOI: 10.1016/j.heliyon.2024.e28219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Revised: 03/12/2024] [Accepted: 03/13/2024] [Indexed: 03/26/2024] Open
Abstract
The increased rate of antibiotic resistance strongly limits the resolution of Salmonella enterica serovar Typhimurium (S. Typhimurium) infection. Therefore, new strategies to control bacterial infections are urgently needed. Bacillus subtilis (B. subtilis) and its metabolites are desirable antibacterial agents. Here, we aimed to evaluate the antibacterial activity of the novel B. subtilis strain GXYX (No: PRJNA940956) crude lipopeptide against S. Typhimurium. In vitro, GXYX crude lipopeptides affected S. Typhimurium biofilm formation and swimming and attenuated the adhesion and invasion abilities of S. Typhimurium toward BHK-21 cells; in addition, it inhibited the mRNA expression of the filA, filC, csgA, and csgB genes, which are related to the adhesion and invasion ability of S. Typhimurium. In vivo, pretreatment with GXYX crude lipopeptide via intragastric administration improved the survival rate by 30%, which was related to reductions in organ bacterial loads and clinical signs in mice. Intragastric administration of GXYX crude lipopeptide significantly downregulated the mRNA levels of TNF-α, IL-1β, IL-12 and IL-6 in response to S. Typhimurium-induced inflammation compared with intraperitoneal injection. Moreover, it significantly improved the intestinal barrier-related gene (ZO-1, claudin-1, occludin-1) mRNA levels in intestinal tissue damaged by S. Typhimurium infection. In conclusion, GXYX crude lipopeptides were effective at reducing S. Typhimurium colonization, laying a foundation for the further development of novel antibacterial agents.
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Affiliation(s)
- Jingya Zhang
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Yifan Wu
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Wei Li
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Honglin Xie
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Jingyan Li
- College of Food Science and Engineering, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Yongqiang Miao
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Zengqi Yang
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Yefei Zhou
- Department of Life Science, Nanjing Xiaozhuang University, Nanjing, 211171, Jiangsu, China
| | - Xinglong Wang
- College of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China
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Dobrzyński J, Jakubowska Z, Kulkova I, Kowalczyk P, Kramkowski K. Biocontrol of fungal phytopathogens by Bacillus pumilus. Front Microbiol 2023; 14:1194606. [PMID: 37560520 PMCID: PMC10407110 DOI: 10.3389/fmicb.2023.1194606] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 07/03/2023] [Indexed: 08/11/2023] Open
Abstract
Plant growth-promoting bacteria are one of the most interesting methods of controlling fungal phytopathogens. These bacteria can participate in biocontrol via a variety of mechanisms including lipopeptide production, hydrolytic enzymes (e.g., chitinase, cellulases, glucanase) production, microbial volatile organic compounds (mVOCs) production, and induced systemic resistance (ISR) triggering. Among the bacterial genera most frequently studied in this aspect are Bacillus spp. including Bacillus pumilus. Due to the range of biocontrol traits, B. pumilus is one of the most interesting members of Bacillus spp. that can be used in the biocontrol of fungal phytopathogens. So far, a number of B. pumilus strains that exhibit biocontrol properties against fungal phytopathogens have been described, e.g., B. pumilus HR10, PTB180, B. pumilus SS-10.7, B. pumilus MCB-7, B. pumilus INR7, B. pumilus SE52, SE34, SE49, B. pumilus RST25, B. pumilus JK-SX001, and B. pumilus KUDC1732. B. pumilus strains are capable of suppressing phytopathogens such as Arthrobotrys conoides, Fusarium solani, Fusarium oxysporum, Sclerotinia sclerotiorum, Rhizoctonia solani, and Fagopyrum esculentum. Importantly, B. pumilus can promote plant growth regardless of whether it alters the native microbiota or not. However, in order to increase its efficacy, research is still needed to clarify the relationship between the native microbiota and B. pumilus. Despite that, it can already be concluded that B. pumilus strains are good candidates to be environmentally friendly and commercially effective biocontrol agents.
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Affiliation(s)
- Jakub Dobrzyński
- Institute of Technology and Life Sciences—National Research Institute, Raszyn, Poland
| | - Zuzanna Jakubowska
- Institute of Technology and Life Sciences—National Research Institute, Raszyn, Poland
| | - Iryna Kulkova
- Institute of Technology and Life Sciences—National Research Institute, Raszyn, Poland
| | - Paweł Kowalczyk
- Department of Animal Nutrition, The Kielanowski Institute of Animal Physiology and Nutrition, Polish Academy of Sciences, Jabłonna, Poland
| | - Karol Kramkowski
- Department of Physical Chemistry, Medical University of Białystok, Białystok, Poland
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Hu J, Su Z, Dong B, Wang D, Liu X, Meng H, Guo Q, Zhou H. Characterization of a Bacillus subtilis S-16 Thiazole-Synthesis-Related Gene thiS Knockout and Antimicrobial Activity Analysis. Curr Issues Mol Biol 2023; 45:4600-4611. [PMID: 37367041 DOI: 10.3390/cimb45060292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 05/23/2023] [Accepted: 05/23/2023] [Indexed: 06/28/2023] Open
Abstract
Bacillus subtilis S-16 isolated from sunflower-rhizosphere soil is an effective biocontrol agent for preventing soilborne diseases in plants. Previous research revealed that the volatile organic compounds (VOCs) produced by the S-16 strain have strong inhibitory effects on Sclerotinia sclerotiorum. The identification of the VOCs of S-16 using gas chromatography-tandem mass spectrometry (GC-MS/MS) revealed 35 compounds. Technical-grade formulations of four of these compounds were chosen for further study: 2-pentadecanone, 6,10,14-trimethyl-2-octanone, 2-methyl benzothiazole (2-MBTH), and heptadecane. The major constituent, 2-MBTH, plays an important role in the antifungal activity of the VOCs of S-16 against the growth of Sclerotinia sclerotiorum. The purpose of this study was to determine the impact of the thiS gene's deletion on the 2-MBTH production and to conduct an antimicrobial activity analysis of the Bacillus subtilis S-16. The thiazole-biosynthesis gene was deleted via homologous recombination, after which the contents of 2-MBTH in the wild-type and mutant S-16 strains were analyzed using GC-MS. The antifungal effects of the VOCs were determined using a dual-culture technique. The morphological characteristics of the Sclerotinia sclerotiorum mycelia were examined via scanning-electron microscopy (SEM). Additionally, the lesion areas on the sunflower leaves with and without treatment with the VOCs from the wild-type and mutant strains were measured to explore the effects of the VOCs on the virulence of the Sclerotinia sclerotiorum. Moreover, the effects of the VOCs on the sclerotial production were assessed. We showed that the mutant strain produced less 2-MBTH. The ability of the VOCs produced by the mutant strain to inhibit the growth of the mycelia was also reduced. The SEM observation showed that the VOCs released by the mutant strain also caused more flaccid and gapped hyphae in the Sclerotinia sclerotiorum. The Sclerotinia sclerotiorum treated by the VOCs produced by the mutant strains caused more damage to the leaves than that treated by the VOCs produced by the wild type and the mutant-strain-produced VOCs inhibited sclerotia formation less. The production of 2-MBTH and its antimicrobial activities were adversely affected to varying degrees by the deletion of thiS.
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Affiliation(s)
- Jinghan Hu
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
| | - Zhenhe Su
- Institute of Plant Protection, Hebei Academy of Agricultural and Forestry Sciences, Baoding 071000, China
| | - Baozhu Dong
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
- Inner Mongolia Cold and Arid Region Crop Protection Engineering Technology Center, Hohhot 010020, China
| | - Dong Wang
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
- Inner Mongolia Cold and Arid Region Crop Protection Engineering Technology Center, Hohhot 010020, China
| | - Xiaomeng Liu
- Institute of Plant Protection, Hebei Academy of Agricultural and Forestry Sciences, Baoding 071000, China
| | - Huanwen Meng
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
- Inner Mongolia Cold and Arid Region Crop Protection Engineering Technology Center, Hohhot 010020, China
| | - Qinggang Guo
- Institute of Plant Protection, Hebei Academy of Agricultural and Forestry Sciences, Baoding 071000, China
| | - Hongyou Zhou
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
- Inner Mongolia Cold and Arid Region Crop Protection Engineering Technology Center, Hohhot 010020, China
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Ghazala I, Chiab N, Saidi MN, Gargouri-Bouzid R. The Plant Growth-Promoting Bacteria Strain Bacillus mojavensis I4 Enhanced Salt Stress Tolerance in Durum Wheat. Curr Microbiol 2023; 80:178. [PMID: 37036517 DOI: 10.1007/s00284-023-03288-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Accepted: 03/25/2023] [Indexed: 04/11/2023]
Abstract
Plant growth and production are adversely affected by soil salinity. A plant growth-promoting bacteria (PGPB) designated as the "I4 strain" of Bacillus mojavensis was isolated from Tunisian soil (Sfax, Tunisia) and showed the ability to be grown in the presence of NaCl concentrations ranging from 0 to 10% in Luria Bertani (LB) medium. The PGPB-mediated salt tolerance in durum wheat was evaluated. The physiological parameters such as growth, shoot and root length, dry and fresh weight were higher in I4-inoculated wheat plants in comparison with non-treated plants under salt stress. Results showed that this strain promoted wheat growth and preserved the membrane damage by notably lowering the electrolytes leakage and malondialdehyde content in contrast to non-inoculated plants. Moreover, leaf chlorophyll content, biochemical parameters and antioxidant enzyme activities measurement showed a better salt and heavy metal stress adaptation of the I4-inoculated plants. Due to these outcomes, it could be suggested that the inoculation of the PGPB I4 strain enhanced the wheat plant's growth, especially under salt stress conditions. This study confirms the ameliorative role played by PGPB in tolerating salt stress in wheat and their potential use as biofertilizers to enhance its growth in saline soil and help in promoting this plant's culture to provide food security under these perturbed global circumstances.
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Affiliation(s)
- Imen Ghazala
- Laboratory of Plant Improvement and Valorization of Agricultural Resources, National Engineering School of Sfax, Sfax, Tunisia.
| | - Nour Chiab
- Laboratory of Plant Improvement and Valorization of Agricultural Resources, National Engineering School of Sfax, Sfax, Tunisia
| | - Mohamed Najib Saidi
- Biotechnology and Plant Improvement Laboratory, Biotechnology Center of Sfax, Sfax, Tunisia
| | - Radhia Gargouri-Bouzid
- Laboratory of Plant Improvement and Valorization of Agricultural Resources, National Engineering School of Sfax, Sfax, Tunisia
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Huarachi SF, Petroselli G, Erra-Balsells R, Audisio MC. Antibacterial activity against enterovirulent Escherichia coli strains from Bacillus amyloliquefaciens B31 and Bacillus subtilis subsp. subtilis C4: MALDI-TOF MS profiling and MALDI TOF/TOF MS structural analysis on lipopeptides mixtures. JOURNAL OF MASS SPECTROMETRY : JMS 2022; 57:e4896. [PMID: 36426779 DOI: 10.1002/jms.4896] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Revised: 11/05/2022] [Accepted: 11/09/2022] [Indexed: 06/16/2023]
Abstract
In this work, two Bacillus strains isolated from honey (Bacillus subtilis subsp. subtilis C4; access code HQ828992) and from a waste of an artisanal tannery (Bacillus amyloliquefaciens B31; access code KP893752) were evaluated in order to determine their antibacterial activity against five enteropathogenic Escherichia coli strains. The number of viable cultivable cells of the different strains of E. coli analyzed was determined by plate count. The crude cell-free supernatants of both Bacillus strains exerted anti-E. coli activities, whereas only the lipopeptide fraction of B31 had significant E. coli inhibition. The lipopeptides produced by the Bacillus were analyzed using matrix-assisted laser desorption-ionization mass spectrometry (MALDI MS). The analysis was conducted combining the profiles (fingerprints) of the lipopeptides mixture and the individual lipopeptide fragmentation (tandem mass spectrometry [MS/MS] mode), both obtained from the same lipopeptides mixture sample, for higher output. Data obtained from C4 and B31 revealed that surfactin homologues were the most abundant lipopeptides produced by both strains studied. Additionally, kurstakin, iturin, and fengycin homologues were detected. Using the MS/MS mode, it was demonstrated that isobar compounds belonging to different families were produced by each Bacillus strain (e.g., C-16 bacillomycin D was detected in B31 samples, meanwhile C-15 iturin C was detected in C4). MS/MS analysis contributed with relevant information about the type of lipopeptides synthesized by Bacillus strains studied in this work.
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Affiliation(s)
- Sergio Fernando Huarachi
- Facultad de Ciencias Agrarias, Universidad Nacional de Jujuy, Juan Bautista Alberdi 47, San Salvador de Jujuy, 4600, Argentina
| | - Gabriela Petroselli
- Facultad de Ciencias Exactas y Naturales, Centro de Investigación en Hidratos de Carbono (CIHIDECAR), CONICET, Universidad de Buenos Aires, Pabellón II, 3er P., Ciudad Universitaria, Buenos Aires, 1428, Argentina
- Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, 3er P., Ciudad Universitaria, Buenos Aires, 1428, Argentina
| | - Rosa Erra-Balsells
- Facultad de Ciencias Exactas y Naturales, Centro de Investigación en Hidratos de Carbono (CIHIDECAR), CONICET, Universidad de Buenos Aires, Pabellón II, 3er P., Ciudad Universitaria, Buenos Aires, 1428, Argentina
- Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, 3er P., Ciudad Universitaria, Buenos Aires, 1428, Argentina
| | - Marcela Carina Audisio
- Instituto de Investigaciones para la Industria Química (INIQUI), CONICET, Universidad Nacional de Salta, Av. Bolivia 5150, Salta, 4400, Argentina
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Hammami R, Oueslati M, Smiri M, Nefzi S, Ruissi M, Comitini F, Romanazzi G, Cacciola SO, Sadfi Zouaoui N. Epiphytic Yeasts and Bacteria as Candidate Biocontrol Agents of Green and Blue Molds of Citrus Fruits. J Fungi (Basel) 2022; 8:jof8080818. [PMID: 36012806 PMCID: PMC9410262 DOI: 10.3390/jof8080818] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Revised: 07/05/2022] [Accepted: 07/05/2022] [Indexed: 11/18/2022] Open
Abstract
Overall, 180 yeasts and bacteria isolated from the peel of citrus fruits were screened for their in vitro antagonistic activity against Penicillium digitatum and P. italicum, causative agents of green and blue mold of citrus fruits, respectively. Two yeast and three bacterial isolates were selected for their inhibitory activity on mycelium growth. Based on the phylogenetic analysis of 16S rDNA and ITS rDNA sequences, the yeast isolates were identified as Candida oleophila and Debaryomyces hansenii while the bacterial isolates were identified as Bacillus amyloliquefaciens, B. pumilus and B. subtilis. All five selected isolates significantly reduced the incidence of decay incited by P. digitatum and P. italicum on ‘Valencia’ orange and ‘Eureka’ lemon fruits. Moreover, they were effective in preventing natural infections of green and blue mold of fruits stored at 4 °C. Treatments with antagonistic yeasts and bacteria did not negatively affect the quality and shelf life of fruits. The antagonistic efficacy of the five isolates depended on multiple modes of action, including the ability to form biofilms and produce antifungal lipopeptides, lytic enzymes and volatile compounds. The selected isolates are promising as biocontrol agents of postharvest green and blue molds of citrus fruits.
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Affiliation(s)
- Rania Hammami
- Laboratoire de Mycologie, Pathologies et Biomarqueurs (LR16ES05), Département de Biologie, Université de Tunis-El Manar, Tunis 2092, Tunisia; (R.H.); (M.O.); (M.S.); (S.N.)
| | - Maroua Oueslati
- Laboratoire de Mycologie, Pathologies et Biomarqueurs (LR16ES05), Département de Biologie, Université de Tunis-El Manar, Tunis 2092, Tunisia; (R.H.); (M.O.); (M.S.); (S.N.)
| | - Marwa Smiri
- Laboratoire de Mycologie, Pathologies et Biomarqueurs (LR16ES05), Département de Biologie, Université de Tunis-El Manar, Tunis 2092, Tunisia; (R.H.); (M.O.); (M.S.); (S.N.)
| | - Souhaila Nefzi
- Laboratoire de Mycologie, Pathologies et Biomarqueurs (LR16ES05), Département de Biologie, Université de Tunis-El Manar, Tunis 2092, Tunisia; (R.H.); (M.O.); (M.S.); (S.N.)
| | - Mustapha Ruissi
- Laboratoire de Biotechnologie Appliquée à l’Agriculture, INRA Tunisie, Université de Carthage, Ariana 2049, Tunisia;
| | - Francesca Comitini
- Department of Life and Environmental Sciences, Marche Polytechnic University, Via Brecce Bianche, 60131 Ancona, Italy;
| | - Gianfranco Romanazzi
- Plant Pathology, Department of Agricultural, Food and Environmental Sciences, Marche Polytechnic University, Via Brecce Bianche, 60131 Ancona, Italy;
| | - Santa Olga Cacciola
- Plant Pathology, Department of Agriculture, Food and Environment, University of Catania, V.S. Sofia, 100-95123 Catania, Italy;
| | - Najla Sadfi Zouaoui
- Laboratoire de Mycologie, Pathologies et Biomarqueurs (LR16ES05), Département de Biologie, Université de Tunis-El Manar, Tunis 2092, Tunisia; (R.H.); (M.O.); (M.S.); (S.N.)
- Correspondence:
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8
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Ghazala I, Charfeddine S, Charfeddine M, Gargouri-Bouzid R, Ellouz-Chaabouni S, Haddar A. Antimicrobial and antioxidant activities of Bacillus mojavensis I4 lipopeptides and their potential application against the potato dry rot causative Fusarium solani. Arch Microbiol 2022; 204:484. [PMID: 35834024 DOI: 10.1007/s00203-022-03098-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 06/19/2022] [Accepted: 06/21/2022] [Indexed: 11/02/2022]
Abstract
Lipopeptides are diverse metabolites produced by various bacterial and fungal genera. They are known for their antimicrobial and surfactant activities with diverse environmental, pharmaceutical, and also agronomic applications as biocontrol agents. In this study, a PCR was used to confirm the presence of NRPS genes in Bacillus mojavensis I4. This bacterial strain could produce diverse lipopeptides which belong to the fengycin, and surfactin families. The antioxidant activity of I4 biosurfactants was determined through four different in vitro assays. Furthermore, antimicrobial activity assays indicated that I4 lipopeptides exhibited marked inhibitory activity against several bacterial and fungal strains. Further treatment of potato dry rot causative pathogen Fusarium solani with I4 lipopeptides demonstrated a remarkable reduction in the fungal penetration by almost 80% after 15 days of incubation. The findings suggest that I4 lipopeptide is a potential biocontrol agent during potato tuber storage.
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Affiliation(s)
- Imen Ghazala
- Laboratory of Plant Improvement and Valorization of Agricultural Resources (LR16ES20), National School of Engineering, Sfax University, P.O. Box 1173, 3038, Sfax, Tunisia.
| | - Safa Charfeddine
- Laboratory of Plant Improvement and Valorization of Agricultural Resources (LR16ES20), National School of Engineering, Sfax University, P.O. Box 1173, 3038, Sfax, Tunisia
| | - Mariam Charfeddine
- Laboratory of Plant Improvement and Valorization of Agricultural Resources (LR16ES20), National School of Engineering, Sfax University, P.O. Box 1173, 3038, Sfax, Tunisia
| | - Radhia Gargouri-Bouzid
- Laboratory of Plant Improvement and Valorization of Agricultural Resources (LR16ES20), National School of Engineering, Sfax University, P.O. Box 1173, 3038, Sfax, Tunisia
| | - Semia Ellouz-Chaabouni
- Laboratory of Plant Improvement and Valorization of Agricultural Resources (LR16ES20), National School of Engineering, Sfax University, P.O. Box 1173, 3038, Sfax, Tunisia
| | - Anissa Haddar
- Laboratory of Plant Improvement and Valorization of Agricultural Resources (LR16ES20), National School of Engineering, Sfax University, P.O. Box 1173, 3038, Sfax, Tunisia
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9
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Lei F, Chen Y, Chen L, Zhang L, Zheng J. An arginine aminopeptidase from marine
Bacillus axarquiensis
SWJSX8 and its application in improving pumpkin seed protein hydrolysis. Int J Food Sci Technol 2021. [DOI: 10.1111/ijfs.15163] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Affiliation(s)
- Fenfen Lei
- College of Food Science and Engineering Wuhan Polytechnic University Wuhan 430023 China
- Key Laboratory for Deep Processing of Major Grain and Oil Ministry of Education Wuhan 430023 China
- Grain and Oil Resources Comprehensive Exploitation and Engineering Technology Research Center of State of Administration of Grain Wuhan 430023 China
| | - Yaqi Chen
- College of Food Science and Engineering Wuhan Polytechnic University Wuhan 430023 China
- Key Laboratory for Deep Processing of Major Grain and Oil Ministry of Education Wuhan 430023 China
| | - Lin Chen
- College of Food Science and Engineering Wuhan Polytechnic University Wuhan 430023 China
- Key Laboratory for Deep Processing of Major Grain and Oil Ministry of Education Wuhan 430023 China
| | - Liwei Zhang
- College of Food Science and Engineering Wuhan Polytechnic University Wuhan 430023 China
| | - Jincheng Zheng
- College of Food Science and Engineering Wuhan Polytechnic University Wuhan 430023 China
- Key Laboratory for Deep Processing of Major Grain and Oil Ministry of Education Wuhan 430023 China
- Grain and Oil Resources Comprehensive Exploitation and Engineering Technology Research Center of State of Administration of Grain Wuhan 430023 China
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Cortés‐Camargo S, Acuña‐Avila P, Arrieta‐Báez D, Montañez‐Barragán B, Morato A, Sanz‐Martín J, Barragán‐Huerta B. Biosurfactant Production by
Bacillus tequilensis
ZSB10
: Structural Characterization, Physicochemical, and Antifungal Properties. J SURFACTANTS DETERG 2021. [DOI: 10.1002/jsde.12515] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- S. Cortés‐Camargo
- Universidad Tecnológica de Zinacantepec Av. Libramiento Universidad 106 Col. San Bartolo el Llano Zinacantepec Estado de México 51361 Mexico
| | - P.E. Acuña‐Avila
- Universidad Tecnológica de Zinacantepec Av. Libramiento Universidad 106 Col. San Bartolo el Llano Zinacantepec Estado de México 51361 Mexico
| | - D. Arrieta‐Báez
- Instituto Politécnico Nacional—CNMN Unidad Profesional Adolfo López Mateos Col. Zacatenco Ciudad de México 07738 Mexico
| | - B. Montañez‐Barragán
- Departamento de Ingeniería en Sistemas Ambientales, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional Unidad Profesional Adolfo López Mateos Ciudad de México 07738 Mexico
| | - A.I. Morato
- Departamento de Biología Molecular, Facultad de Ciencias Universidad Autónoma de Madrid Edificio de Biológicas C‐014/021. c/ Darwin 2 Madrid 28049 Spain
| | - J.L. Sanz‐Martín
- Departamento de Biología Molecular, Facultad de Ciencias Universidad Autónoma de Madrid Edificio de Biológicas C‐014/021. c/ Darwin 2 Madrid 28049 Spain
| | - B.E. Barragán‐Huerta
- Departamento de Ingeniería en Sistemas Ambientales, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional Unidad Profesional Adolfo López Mateos Ciudad de México 07738 Mexico
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Ribeiro IDA, Bach E, da Silva Moreira F, Müller AR, Rangel CP, Wilhelm CM, Barth AL, Passaglia LMP. Antifungal potential against Sclerotinia sclerotiorum (Lib.) de Bary and plant growth promoting abilities of Bacillus isolates from canola (Brassica napus L.) roots. Microbiol Res 2021; 248:126754. [PMID: 33848783 DOI: 10.1016/j.micres.2021.126754] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Revised: 02/28/2021] [Accepted: 03/27/2021] [Indexed: 10/21/2022]
Abstract
Endophytic bacteria show important abilities in promoting plant growth and suppressing phytopathogens, being largely explored in agriculture as biofertilizers or biocontrol agents. Bacteria from canola roots were isolated and screened for different plant growth promotion (PGP) traits and biocontrol of Sclerotinia sclerotiorum. Thirty isolates belonging to Bacillus, Paenibacillus, Lysinibacillus, and Microbacterium genera were obtained. Several isolates produced auxin, siderophores, hydrolytic enzymes, fixed nitrogen and solubilized phosphate. Five isolates presented antifungal activity against S. sclerotiorum by the dual culture assay and four of them also inhibited fungal growth by volatile organic compounds production. All antagonistic isolates belonged to the Bacillus genus, and had their genomes sequenced for the search of biosynthetic gene clusters (BGC) related to antimicrobial metabolites. These isolates were identified as Bacillus safensis (3), Bacillus pumilus (1), and Bacillus megaterium (1), using the genomic metrics ANI and dDDH. Most strains showed several common BGCs, including bacteriocin, polyketide synthase (PKS), and non-ribosomal peptide synthetase (NRPS), related to pumilacidin, bacillibactin, bacilysin, and other antimicrobial compounds. Pumilacidin-related mass peaks were detected in acid precipitation extracts through MALDI-TOF analysis. The genomic features demonstrated the potential of these isolates in the suppression of plant pathogens; however, some aspects of plant-bacterial interactions remain to be elucidated.
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Affiliation(s)
- Igor Daniel Alves Ribeiro
- Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves, 9500, Caixa Postal 15.053, 91501-970, Porto Alegre, RS, Brazil
| | - Evelise Bach
- Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves, 9500, Caixa Postal 15.053, 91501-970, Porto Alegre, RS, Brazil
| | - Fernanda da Silva Moreira
- Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves, 9500, Caixa Postal 15.053, 91501-970, Porto Alegre, RS, Brazil
| | - Aline Reis Müller
- Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves, 9500, Caixa Postal 15.053, 91501-970, Porto Alegre, RS, Brazil
| | - Caroline Pinto Rangel
- Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves, 9500, Caixa Postal 15.053, 91501-970, Porto Alegre, RS, Brazil
| | - Camila Mörschbächer Wilhelm
- LABRESIS - Laboratório de Pesquisa em Resistência Bacteriana, Centro de Pesquisa Experimental, Hospital de Clínicas de Porto Alegre (HCPA), Rua Ramiro Barcelos 2350, Porto Alegre, RS, 90.035-903, Brazil
| | - Afonso Luis Barth
- LABRESIS - Laboratório de Pesquisa em Resistência Bacteriana, Centro de Pesquisa Experimental, Hospital de Clínicas de Porto Alegre (HCPA), Rua Ramiro Barcelos 2350, Porto Alegre, RS, 90.035-903, Brazil
| | - Luciane Maria Pereira Passaglia
- Departamento de Genética, Instituto de Biociências, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves, 9500, Caixa Postal 15.053, 91501-970, Porto Alegre, RS, Brazil.
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Jemil N, Hmidet N, Manresa A, Rabanal F, Nasri M. Isolation and characterization of kurstakin and surfactin isoforms produced by Enterobacter cloacae C3 strain. JOURNAL OF MASS SPECTROMETRY : JMS 2019; 54:7-18. [PMID: 30324699 DOI: 10.1002/jms.4302] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2018] [Revised: 10/08/2018] [Accepted: 10/09/2018] [Indexed: 06/08/2023]
Abstract
In this work, the extraction, structural analysis, and identification as well as antimicrobial, anti-adhesive, and antibiofilm activities of lipopeptides produced by Enterobacter cloacae C3 strain were studied. A combination of chromatographic and spectroscopic techniques offers opportunities for a better characterization of the biosurfactant structure. Thin layer chromatography (TLC) and HPLC for amino acid composition determination are used. Efficient spectroscopic techniques have been utilized for investigations on the biochemical structure of biosurfactants, such as Fourier transform infrared (FT-IR) spectroscopy and mass spectrometry analysis. This is the first work describing the production of different isoforms belonging to kurstakin and surfactin families by E cloacae strain. Three kurstakin homologues differing by the fatty acid chain length from C10 to C12 were detected. The spectrum of lipopeptides belonging to surfactin family contains various isoforms differing by the fatty acid chain length as well as the amino acids at positions four and seven. Lipopeptide C3 extract exhibited important antibacterial activity against Gram-positive and Gram-negative bacteria, antifungal activity, and interesting anti-adhesive and disruptive properties against biofilm formation by human pathogenic bacterial strains: Salmonella typhimurium, Klebsiella pneumoniae, Staphylococcus aureus, Bacillus cereus, and Candida albicans.
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Affiliation(s)
- Nawel Jemil
- Laboratoire de Génie Enzymatique et de Microbiologie, Université de Sfax, Ecole Nationale d'Ingénieurs de Sfax, Sfax, Tunisia
| | - Noomen Hmidet
- Laboratoire de Génie Enzymatique et de Microbiologie, Université de Sfax, Ecole Nationale d'Ingénieurs de Sfax, Sfax, Tunisia
| | - Angeles Manresa
- Section of Microbiology, Department of Biology, Health and Environment, Faculty of Pharmacy, University of Barcelona, Barcelona, Spain
| | - Francesc Rabanal
- Section of Organic Chemistry, Department of Inorganic and Organic Chemistry, Faculty of Chemistry, University of Barcelona, Barcelona, Spain
| | - Moncef Nasri
- Laboratoire de Génie Enzymatique et de Microbiologie, Université de Sfax, Ecole Nationale d'Ingénieurs de Sfax, Sfax, Tunisia
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Bio-emulsifying and biodegradation activities of syringafactin producing Pseudomonas spp. strains isolated from oil contaminated soils. Biodegradation 2018; 30:259-272. [DOI: 10.1007/s10532-018-9861-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2017] [Accepted: 10/17/2018] [Indexed: 12/11/2022]
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Biocontrol of Sclerotinia sclerotiorum (Lib.) de Bary on common bean by native lipopeptide-producer Bacillus strains. Microbiol Res 2018; 211:21-30. [PMID: 29705203 DOI: 10.1016/j.micres.2018.04.003] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2017] [Revised: 03/14/2018] [Accepted: 04/06/2018] [Indexed: 11/20/2022]
Abstract
Bacillus sp. B19, Bacillus sp. P12 and B. amyloliquefaciens B14 were isolated from soils of Salta province, and PGPR properties on the common bean (Phaseolus vulgaris L.) cv. Alubia and antagonistic activity against Sclerotinia sclerotiorum were studied. It was determined that B19 and P12 increased crop germination potential (GP) from the common bean by 14.5% compared to control seeds; these strains also increased root length (10.4 and 15%, respectively) and stem length (20.2 and 30%, respectively) compared to the control; however, as for the B14 strain, no increases in growth parameters were detected. In addition, all the treatments that combined two bacilli: B14 + B19, B14 + P12 and B19 + P12, generated beneficial effects on GP and seedling growth compared to control seeds, but not compared to a single inoculant. B19 and P12 strains synthesized auxins at concentrations of 5.71 and 4.90 mg/mL, respectively, and it was qualitatively determined that they synthesize siderophores. In addition, previous studies have determined that B14 produces auxins in a concentration of 10.10 mg/mL, and qualitatively synthesizes siderophores. The phytosanitary state of the white bean cv. Alubia control seeds revealed bacterial contamination in 87% of all the evaluated seeds and different fungi such as Cladosporium sp., Fusarium sp., and Rhizopus sp. Bean seeds treated with B14, B19 or P12 showed no growth of contaminating bacteria or of pathogenic fungi; in fact, bacilli inoculum development was observed in all seeds. Additionally, B19, P12 and B14 strains inhibited in vitro the development of 9 native S. sclerotiorum strains isolated from the Salta region, with FI ranging between 60 and 100%. The three Bacillus strains synthesized different isoforms of the lipopeptides: surfactin, iturin, and fengycin in the presence of S. sclerotiorum, as determined by MALDI-TOF. In the in vivo trials, when common bean seeds were grown in soils contaminated with S. sclerotiorum, an incidence of 100% was determined when the seeds were not treated with any Bacillus. Seeds treated with the chemical fungicide and sown in S. sclerotiorum-infested soil did not produce seed emergence, while the inoculation of the seeds with B14 + P12, B14 + B19 or B19 + P12 reduced the effect of the pathogen by 46, 43 and 25%, respectively. Disease progression in B14 + P12 and B14 + B19 treatments was significantly lower than in the remaining treatments, with an AUDPC of 873.75 and 1071, respectively.
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Djenane Z, Nateche F, Amziane M, Gomis-Cebolla J, El-Aichar F, Khorf H, Ferré J. Assessment of the Antimicrobial Activity and the Entomocidal Potential of Bacillus thuringiensis Isolates from Algeria. Toxins (Basel) 2017; 9:E139. [PMID: 28406460 PMCID: PMC5408213 DOI: 10.3390/toxins9040139] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2017] [Revised: 03/29/2017] [Accepted: 04/11/2017] [Indexed: 11/23/2022] Open
Abstract
This work represents the first initiative to analyze the distribution of B. thuringiensis in Algeria and to evaluate the biological potential of the isolates. A total of 157 isolates were recovered, with at least one isolate in 94.4% of the samples. The highest Bt index was found in samples from rhizospheric soil (0.48) and from the Mediterranean area (0.44). Most isolates showed antifungal activity (98.5%), in contrast to the few that had antibacterial activity (29.9%). A high genetic diversity was made evident by the finding of many different crystal shapes and various combinations of shapes within a single isolate (in 58.4% of the isolates). Also, over 50% of the isolates harbored cry1, cry2, or cry9 genes, and 69.3% contained a vip3 gene. A good correlation between the presence of chitinase genes and antifungal activity was observed. More than half of the isolates with a broad spectrum of antifungal activity harbored both endochitinase and exochitinase genes. Interestingly, 15 isolates contained the two chitinase genes and all of the above cry family genes, with some of them harboring a vip3 gene as well. The combination of this large number of genes coding for entomopathogenic proteins suggests a putative wide range of entomotoxic activity.
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Affiliation(s)
- Zahia Djenane
- Microbiology Group, Laboratory of Cellular and Molecular Biology, Faculty of Biological Sciences, University of Science and Technology Houari Boumediene (USTHB), BP 32, EL ALIA, Bab Ezzouar, 16111 Algiers, Algeria.
- ERI BIOTECMED and Department of Genetics, Universitat de València, Dr. Moliner, 50, BURJASSOT, 46100 Valencia, Spain.
- Department of Science and Technology, Faculty of Science, University Dr Yahia Frès, 26000 Médéa, Algeria.
| | - Farida Nateche
- Microbiology Group, Laboratory of Cellular and Molecular Biology, Faculty of Biological Sciences, University of Science and Technology Houari Boumediene (USTHB), BP 32, EL ALIA, Bab Ezzouar, 16111 Algiers, Algeria.
| | - Meriam Amziane
- Microbiology Group, Laboratory of Cellular and Molecular Biology, Faculty of Biological Sciences, University of Science and Technology Houari Boumediene (USTHB), BP 32, EL ALIA, Bab Ezzouar, 16111 Algiers, Algeria.
| | - Joaquín Gomis-Cebolla
- ERI BIOTECMED and Department of Genetics, Universitat de València, Dr. Moliner, 50, BURJASSOT, 46100 Valencia, Spain.
| | - Fairouz El-Aichar
- Microbiology Group, Laboratory of Cellular and Molecular Biology, Faculty of Biological Sciences, University of Science and Technology Houari Boumediene (USTHB), BP 32, EL ALIA, Bab Ezzouar, 16111 Algiers, Algeria.
| | - Hassiba Khorf
- Microbiology Group, Laboratory of Cellular and Molecular Biology, Faculty of Biological Sciences, University of Science and Technology Houari Boumediene (USTHB), BP 32, EL ALIA, Bab Ezzouar, 16111 Algiers, Algeria.
| | - Juan Ferré
- ERI BIOTECMED and Department of Genetics, Universitat de València, Dr. Moliner, 50, BURJASSOT, 46100 Valencia, Spain.
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