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Zhao Q, Qin J, Kong F, Wang D, Guo Y, Li Y. A novel red-emission fluorescent probe for the detection of cysteine in vitro and in vivo. J Photochem Photobiol A Chem 2023. [DOI: 10.1016/j.jphotochem.2022.114383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Telegin FY, Karpova VS, Makshanova AO, Astrakhantsev RG, Marfin YS. Solvatochromic Sensitivity of BODIPY Probes: A New Tool for Selecting Fluorophores and Polarity Mapping. Int J Mol Sci 2023; 24:ijms24021217. [PMID: 36674731 PMCID: PMC9860957 DOI: 10.3390/ijms24021217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 12/21/2022] [Accepted: 12/28/2022] [Indexed: 01/11/2023] Open
Abstract
This research work is devoted to collecting a high-quality dataset of BODIPYs in a series of 10-30 solvents. In total, 115 individual compounds in 71 solvents are represented by 1698 arrays of the spectral and photophysical properties of the fluorophore. Each dye for a series of solvents is characterized by a calculated value of solvatochromic sensitivity according to a semiempirical approach applied to a series of solvents. The whole dataset is classified into 6 and 24 clusters of solvatochromic sensitivity, from high negative to high positive solvatochromism. The results of the analysis are visualized by the polarity mapping plots depicting, in terms of wavenumbers, the absorption versus emission, stokes shift versus - (absorption maxima + emission maxima), and quantum yield versus stokes shift. An analysis of the clusters combining several dyes in an individual series of solvents shows that dyes of a high solvatochromic sensitivity demonstrate regular behaviour of the corresponding plots suitable for polarity and viscosity mapping. The fluorophores collected in this study represent a high quality dataset of pattern dyes for analytical and bioanalytical applications. The developed tools could be applied for the analysis of the applicability domain of the fluorescent sensors.
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Affiliation(s)
- Felix Y. Telegin
- G.A. Krestov Institute of Solution Chemistry of the RAS, 153045 Ivanovo, Russia
| | - Viktoria S. Karpova
- Department of Inorganic Chemistry, Ivanovo State University of Chemistry and Technology, 153000 Ivanovo, Russia
| | - Anna O. Makshanova
- Department of Natural Sciences, Mendeleev University of Chemical Technology of Russia, 125047 Moscow, Russia
| | - Roman G. Astrakhantsev
- HSE Tikhonov Moscow Institute of Electronics and Mathematics, HSE University, 101000 Moscow, Russia
| | - Yuriy S. Marfin
- G.A. Krestov Institute of Solution Chemistry of the RAS, 153045 Ivanovo, Russia
- Correspondence:
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Chen Z, Zhang Y, Li Y, Yu W. DFT Investigation of Triarylamine-α-cyanoacrylic Acid Compounds: Structural, Electronic, and Nonlinear Optical Properties. J Mol Model 2022; 28:223. [PMID: 35854157 DOI: 10.1007/s00894-022-05221-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Accepted: 07/07/2022] [Indexed: 10/17/2022]
Abstract
Using the density functional theory and finite field method, nonlinear optical properties of nine triarylamine-α-cyanocinnamic acid derivatives were investigated at the M06-2X/6-311++ G(d,p) and ωB97X-D/6-311++ G(d,p) levels of theory. Except for (E)-2-cyano-3-(4-(di([1,1'-biphenyl]-4-yl)amino)phenyl)acrylic acid (a), which had a D-π-A electronic structure, all the other eight derivatives had an A-π-D-π-A structure. The results suggest that the lowest energy transition of the nine triarylamine derivatives was the π-π* transition from the HOMO to LUMO. The absorption maxima of the derivatives in their ethanol solution were redshifted with respect to those in the gas phase. The introduction of conjugated C = C or C≡C bonds between the biphenyl unit of molecule a had a minor effect on the second-order nonlinear optical properties of the molecule. However, the introduction of C = C bond into the parent molecule improved the third-order nonlinear optical properties. The introduction of a heterocyclic ring (furan ring or thiophene ring) between the triarylamine moiety and the branched chain containing the cyanocinnamic acid group enhanced the second- and third-order nonlinear optical properties; especially, the second- and third-order polarisabilities of molecules b3 and c3, which were obtained by introducing a thiophene ring, were the highest. The second- and third-order polarisabilities of b3 were 0.13 × 105 and 27.13 × 105 a.u., respectively, while those of c3 were 0.14 × 105 and 28.10 × 105 a.u., respectively. This suggests that b3 and c3 have desirable second- and third-order nonlinear optical properties and can be used for designing efficient second- and third-order nonlinear optical materials.
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Affiliation(s)
- Ziran Chen
- Department of Architecture and Environment Engineering, Sichuan Vocational and Technical College, Suining, Sichuan, 629000, People's Republic of China
| | - Yuhong Zhang
- Department of Architecture and Environment Engineering, Sichuan Vocational and Technical College, Suining, Sichuan, 629000, People's Republic of China
| | - Yuan Li
- Department of Architecture and Environment Engineering, Sichuan Vocational and Technical College, Suining, Sichuan, 629000, People's Republic of China.
| | - Wenhao Yu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu, Sichuan, 610068, People's Republic of China. .,College of Polymer Science & Engineering, State Key Laboratory of Polymer Materials Engineering, Sichuan University, Chengdu, 610065, People's Republic of China.
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Qin J, Kong F, Guo Y, Wang D, Zhang C, Li Y. Rational Construction of a Two-Photon NIR Ratiometric Fluorescent Probe for the Detection of Bisulfite in Live Cells, Tissues, and Foods. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:7314-7320. [PMID: 35670208 DOI: 10.1021/acs.jafc.2c02155] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
In this study, we report a novel ratiometric fluorescent probe with a blue shift of 180 nm based on a D-π-A-A structure. The probe composed of a hydroxyl moiety as a donor, a naphthyl ring as a π bridge, and benzothiazole/hemicyanine as an acceptor has good selectivity and high sensitivity to bisulfite (HSO3-) in aqueous solution. Besides one-photon fluorescence properties, the probe possesses excellent two-photon fluorescence properties and is successfully utilized for fluorescence imaging of HSO3- in MCF-7 cells and rat liver tissues. More importantly, the probe also has practical application potential for measuring the HSO3- content of real food samples.
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Affiliation(s)
- Jingcan Qin
- Department of Radiology, Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai Jiao Tong University School of Medicine, 600 Yi Shan Road, Shanghai 200233, China
| | - Fei Kong
- School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China
| | - Yuanyuan Guo
- Department of Radiology, Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai Jiao Tong University School of Medicine, 600 Yi Shan Road, Shanghai 200233, China
| | - Dongya Wang
- Department of Radiology, Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai Jiao Tong University School of Medicine, 600 Yi Shan Road, Shanghai 200233, China
| | - Chuan Zhang
- School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China
| | - Yuehua Li
- Department of Radiology, Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai Jiao Tong University School of Medicine, 600 Yi Shan Road, Shanghai 200233, China
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Rajaraman D, Anthony LA, Sundararajan G, Shanmugam M, Arunkumar A. Synthesis, NMR, anti-oxidant, anti-cancer activity, Molecular docking, DFT Calculations and in silico ADME analysis of 3′-benzoyl-4′-phenyl-5′-(piperazin-1-ylmethyl)spiro[indoline-3,2′-pyrrolidin]-2-one derivatives. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Anthony LA, Nethaji P, Sundararajan G, Rajaraman D. One-pot synthesis, Spectral, X-ray crystal structure, Hirshfeld surface and computational study on potential inhibitory action of novel 1-benzyl-2-(4-methoxynaphthalen-1-yl)-4,5-diphenyl-1H-imidazole derivatives against COVID-19 main protease (Mpro: 6WCF/6Y84). J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131892] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Huang C, Shen B, Wang K, Sun X. BODIPY trimer with 1,3,5-triazine core: Facile synthesis and crystal structure. J PORPHYR PHTHALOCYA 2021. [DOI: 10.1142/s1088424621501091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Trimerization reaction of 8-(4[Formula: see text]-cyanophenyl)-1,3,5,7-tetramethyl-4,4-difluoro-4-bora-3a,4a-diaza-s-indacene (CN-BODIPY) led to the isolation of a new triazine-based BODIPY trimer 2,4,6-tris(8[Formula: see text]-phenyl-1[Formula: see text],3[Formula: see text],5[Formula: see text],7[Formula: see text]-tetramethyl-4[Formula: see text],4[Formula: see text]-difluoro-4[Formula: see text]-bora-3a[Formula: see text],4a[Formula: see text]-diaza-s-indacene)-1,3,5-triazine (1). This BODIPY trimer 1 have been characterized by a series of spectroscopic methods including MALDI-TOF mass, 1H NMR, electronic absorption, IR and fluorescence spectroscopy. In particular, the single crystals of 1 have be obtained by slow diffusion of methanol into the solution of this compound in CHCl3. The BODIPY trimer structure of 1 with a triazine core has been directly revealed on the basis of single crystal X-ray diffraction analysis with the intermolecular interactions investigated by Hirshfeld surface analysis. This work will be helpful for the design and synthesis of new multiple BODIPY derivatives with various application.
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Affiliation(s)
- Chunhua Huang
- National Research Center for Geoanalysis, China Geological Survey, Beijing 100037, China
| | - Bin Shen
- National Research Center for Geoanalysis, China Geological Survey, Beijing 100037, China
| | - Kaili Wang
- Beijing Municipal Research Institute of Environmental Protection, Beijing, 100037, China
| | - Xiaofei Sun
- NCS Testing Technology Co., Ltd, Beijing 100081, China
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Telegin FY, Marfin YS. New insights into quantifying the solvatochromism of BODIPY based fluorescent probes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 255:119683. [PMID: 33799189 DOI: 10.1016/j.saa.2021.119683] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 02/19/2021] [Accepted: 03/03/2021] [Indexed: 06/12/2023]
Abstract
A simple semiempiric phenomenological approach is developed for quantifying the solvent effect on the absorption and emission properties of BODIPYs. It is based on a new rule describing the linear relationship between the difference (Stokes shift) and the sum (double Gibbs free energy of electron transfer) for absorption and emission wavenumbers derived from a combination of solvent functions of Liptay theory. This rule is correspondent to changes of dipole moments in the ground and excited states. High reliability and advantages of the developed approach in comparison with traditional methods of the analysis of the solvatochromism based on Dimroth-Reichard and Lippert-Mataga solvent scales are illustrated for selected BODIPYs exhibiting positive, negative, and near-zero solvatochromism.
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Affiliation(s)
- Felix Y Telegin
- Department of Inorganic Chemistry, Ivanovo State University of Chemistry and Technology 7, Sheremetevsky Ave, Ivanovo 153000, Russia.
| | - Yuriy S Marfin
- Department of Inorganic Chemistry, Ivanovo State University of Chemistry and Technology 7, Sheremetevsky Ave, Ivanovo 153000, Russia
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Qu CL, Su ZM, Gao FW. Regioisomeric BODIPY derivatives: second-order nonlinear optical properties under an external electric field. NEW J CHEM 2021. [DOI: 10.1039/d0nj05626j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The present work aims to study the second-order NLO properties of m-AD and p-AD regioisomers. The βtot value of p-AD is larger than that of m-AD. Significantly, the external electric field effectively regulates the βtot values (0–3.70 × 104 a.u.) of p-AD.
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Affiliation(s)
- Chu-Lin Qu
- College of Chemistry
- Jilin University
- Changchun
- People's Republic of China
| | - Zhong-Min Su
- College of Chemistry
- Jilin University
- Changchun
- People's Republic of China
- School of Chemistry & Environmental Engineering
| | - Feng-Wei Gao
- School of Chemistry & Environmental Engineering
- Changchun University of Science and Technology
- Changchun
- People's Republic of China
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Petrushenko IK, Petrushenko KB. Absorption and fluorescence properties of non-symmetric benzo-, furo-, and thieno-fused structures at the b bonds in the BODIPY frame. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 239:118472. [PMID: 32450538 DOI: 10.1016/j.saa.2020.118472] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2020] [Revised: 05/09/2020] [Accepted: 05/09/2020] [Indexed: 06/11/2023]
Abstract
The influence of furo-, thieno-, and benzo-fused structures at the b bonds in the BODIPY frame on the optical properties is investigated by TD-CAM-B3LYP and RI-CC2 calculations. The most important result is that substituents at the b bond of the BODIPY core affect strongly the S1-S2 gaps. In contrast to the S1 (local excited (LE-type)) state, energy of which is nearly the same for all the substituents at the b bond, energy of the S2 (charge transfer (CT-type)) state depends strongly on the nature of the substituent and decreases in the following order: furo-fused > thieno-fused > benzo-fused. In the last case the inversion of S1 and S2 levels occurs. No red shift of the main long-wave absorption transition and no substantial changes in its intensity can be predicted by the calculations for benzo[b]-derivative (vertical energy (Ev) is 2.95 eV, oscillator strength (f) is 0.80) relative to furo- (Ev = 2.97 eV, f = 0.69) and thieno-derivatives (Ev = 2.95 eV, f = 0.65). However, the dramatic decrease of the fluorescence quantum yield is expected owing to positions of their LE-type (Ev = 2.95 eV, f = 0.80) and CT-type (Ev = 2.79 eV, f = 0.01) transitions. In the case of thieno-fused BODIPY, owing to the approach of the energy levels of the vertical S2 and S1 states, the energy equilibrium of the [1]CT-type state becomes lower than that of the [1]LE state, and Φf of the thieno-derivative may be substantially lower than Φf of the furo-derivative.
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Affiliation(s)
- I K Petrushenko
- Irkutsk National Research Technical University, 83 Lermontov st., 664074 Irkutsk, Russia.
| | - K B Petrushenko
- AE Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, 1 Favorsky st., 664033 Irkutsk, Russia
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Samanta PK, Alam MM, Misra R, Pati SK. Tuning of hyperpolarizability, and one- and two-photon absorption of donor-acceptor and donor-acceptor-acceptor-type intramolecular charge transfer-based sensors. Phys Chem Chem Phys 2019; 21:17343-17355. [PMID: 31355378 DOI: 10.1039/c9cp03772a] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The present work aims to study the effect of solvent as well as arrangement of donor-acceptor groups on linear and non-linear optical (NLO) response properties of two experimentally studied intramolecular charge-transfer (ICT)-based fluorescent sensors. One of them (molecule 1) is a donor-acceptor (D-A) system with hemicyanine and dimethylanilino as electron withdrawing and donating groups, respectively, while the other one (molecule 3) is molecule 1 fused with a boron-dipyrromethene (BODIPY) moiety. BODIPY acts as the electron acceptor group of molecule 2 that as well consists of dimethylanilino as the electron donor. Density functional theory (DFT) as well as time-dependent DFT has been employed to optimize the geometry of the molecules, followed by computation of dipole moment (μ), static first hyperpolarizability (βtotal), and one- and two-photon absorption (TPA) strengths. The results reveal that dipole moment as well as total static first hyperpolarizability (βtotal) of the studied molecules is dominated by the respective components in the direction of charge transfer. The ratio of vector component of first hyperpolarizability (βvec) to βtotal also supports the unidirectional charge transfer in the studied systems. In molecule 3, which is a donor-acceptor-acceptor (D-A-A)-type system, the BODIPY moiety is found to play a major role in controlling the NLO response over the other acceptor group. Solvents are also found to play an important role in controlling the linear as well as NLO response of the studied systems. A significant increase in the first hyperpolarizability as well as TPA cross-section of the studied molecules is predicted due to an increase in the dielectric constant of the medium. The results presented are expected to provide a clue in tuning the NLO response of many ICT-based chromophores, especially those with D-A-A arrangements.
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Affiliation(s)
- Pralok K Samanta
- Theoretical Sciences Unit, School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur P. O., Bengaluru 560064, India.
| | - Md Mehboob Alam
- Department of Chemistry, Indian Institute of Technology Bhilai, Chattisgarh 492015, India
| | - Ramprasad Misra
- Department of Organic Chemistry, Weizmann Institute of Science, Rehovot 76100, Israel.
| | - Swapan K Pati
- Theoretical Sciences Unit, School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur P. O., Bengaluru 560064, India. and New Chemistry Unit, School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur P. O., Bengaluru 560064, India
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Zarei SA. A mononuclear cobalt(II) salophen-type complex: Synthesis, theoretical and experimental electronic absorption and infrared spectra, crystal structure, and predicting of second- and third-order nonlinear optical properties. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2019; 215:225-232. [PMID: 30826581 DOI: 10.1016/j.saa.2019.02.083] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2018] [Revised: 01/06/2019] [Accepted: 02/17/2019] [Indexed: 06/09/2023]
Abstract
A tetradentate Schiff base ligand, (4-nitro-N,N'-o-phenylene-bis(5-methoxysalicylideneimine)) (H2L), and its cobalt(II) complex (CoL•DMF) were synthesized. Elemental analysis, and FT-IR and 1H NMR spectra were used to confirm the molecular structure of H2L ligand. In addition, elemental analysis, molar conductance measurement, infrared and electronic absorption spectroscopies as well as single crystal X-ray diffraction were employed to distinguish the molecular structure of the complex that has a slightly distorted square-planar geometry around the cobalt(II) ion. The geometries of H2L and CoL were optimized by means of the DFT/(U)PBE0/Def2-TZVP level of theory. Good agreement of the optimized geometric parameters of the complex with the corresponding experimental ones and successfully reproduction of the FT-IR spectra of the ligand and complex validated the applied method. Based on the optimized structure of CoL, its electronic absorption spectrum was reproduced by using time-dependent density functional theory (TDDFT) at the same level. Its analysis was carried out to assign the observed electronic transitions and determine their characters. The computed nonlinear optical (NLO) parameters (β, γ and < γ > values) of H2L and CoL by using TDDFT at the same level combined with the sum-over-states (SOS) method are considerable larger values than reference compound i.e. urea. The ligand and the complex in the absence of nitro and methoxy moieties referred to as H2L' and CoL' respectively were optimized to elucidate the effect of these moieties on hyperpolarizabilities values.
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Affiliation(s)
- Seyed Amir Zarei
- Department of Chemistry, Faculty of Science, Sanandaj Branch, Islamic Azad University, Sanandaj, Iran.
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