Unveiling microbial structures during raw microalgae digestion and co-digestion with primary sludge to produce biogas using semi-continuous AnMBR systems

Effects of ciprofloxacin on biogas production and microbial community composition in anaerobic digestion of swine wastewater in ASBR type reactor

In swine farming, antibiotics are often used to reduce disease and promote animal growth. Part of these compounds is not absorbed by the swine body, being excreted and later reaching the treatment systems, soil, and nearby waterbodies. This research sought to investigate the influence of adding ciprofloxacin (CIP) on the anaerobic digestion of swine wastewater. For that, a bench-scale anaerobic sequential batch reactor (ASBR) was used, with 5 L of working volume in six different phases, with volumetric organic loading rate (VOLR) and CIP dosage variation. According to the results, the optimal VOLR for the reactor was 0.60 ± 0.11 gSV L-1 d-1, resulting in biogas productivity of 0.51 ± 0.03 Lbiogas L-1 d-1. After initial stability, adding substrate with 0.5 mgCIP L-1 resulted in an abrupt drop of 82% in the productivity from the 7th to 11th day of addition, coinciding with volatile acids accumulation. Afterward, the reactor recovered and reached apparent stability, with productivity similar to the previous step without the drug. For 2.5 mgCIP L-1 in the substrate, the biogas productivity at equilibrium was 11.8% lower than in the phases with the same VOLR and 0.0 and 0.5 mgCIP L-1. Organic matter removals near 80% were achieved for both dosages. The 16S rRNA metagenomic analyses showed an increase in the relative abundance of most of the phyla found, indicating that the dosages used allowed the acclimatization of microorganisms and possibly the compound biodegradation.

Metabolic responses and microbial community changes to long chain fatty acids: Ammonia synergetic co-inhibition effect during biomethanation

Anaerobic co-digestion is an established strategy for increasing methane production of substrates. However, substrates rich in proteins and lipids could cause a long chain fatty acids (LCFA)-ammonia synergetic co-inhibition effect. The microbial mechanisms of this co-inhibition are still unclear. The current study explored the effect of the synergetic co-inhibition on microbial community changes and prediction of metabolic enzymes to reveal the microbial mechanisms of the co-inhibition effect. The results indicated that during the synergetic co-inhibition, methanogens were mainly affected by ammonia. Decreased relative abundances of Petrimonas (82%) and Paraclostridium (67%) showed that ammonia inhibition contributed to the suppression of LCFA β-oxidation under the synergetic co-inhibition conditions. The accumulation of more LCFA could further suppress microorganisms' activities involved in several steps of anaerobic digestion. Finally, decrease of critical enzymes' abundances confirmed the synergetic co-inhibition effect. Overall, the current study provides novel insights for the alleviation of synergetic co-inhibition during anaerobic digestion.

Enhanced nitritation/denitritation and potential mechanism in an electrochemically assisted sequencing batch biofilm reactor treating sludge digester liquor with extremely low C/N ratios

Nitritation/denitritation is a promising strategy to treat sludge digester liquor but would be unstable and inefficient at extremely low C/N ratios. Here, a novel electrochemically assisted sequencing batch biofilm reactor (E-SBBR) was established to treat synthetic/real sludge digester liquor with decreasing C/N ratios. The results showed that the E-SBBR achieved stable nitritation and appreciable TN removal (>70 %) even at C/N < 0.5. The high-strength free ammonium (FA) (91.1-132.8 mg NH₃-N/L) and long inhibition time (>9h) magnified by electrolysis promoted the robustness of nitritation through efficient nitrite-oxidizing bacteria elimination. Meanwhile, mass balance denoted that heterotrophic denitritation dominated in the enhanced TN removal and relied on carbon supplementation from cell apoptosis/lysis stimulated by electrolysis and high-strength FA, further supported by the recovery of heterotrophic denitrifiers, fermentation bacteria, and relevant functional genes at extremely low C/N ratios. This study provides a novel nitrogen removal approach for the sludge digester liquor treatment.

Cultured and uncultured microbial community associated with biogas production in anaerobic digestion processes

The search for sustainable development has increased interest in the improvement of technologies that use renewable energy sources. One of the alternatives in the production of renewable energy comes from the use of waste including urban solids, animal excrement from livestock, and biomass residues from agro-industrial plants. These materials may be used in the production of biogas, making its production highly sustainable and environmentally friendly. The present study aimed to evaluate the cultivated and uncultivated microbial community from a substrate (starter) used as an adapter for biogas production in anaerobic digestion processes. 16S rDNA metabarcoding revealed the domain of bacteria belonging to the phyla Firmicutes, Bacteroidota, Chloroflexi and Synergistota. The methanogenic group was represented by the phyla Halobacterota and Euryarchaeota. Through 16S rRNA sequencing of isolates recovered from the starter culture, the genera Rhodococcus (Actinobacteria phylum), Vagococcus, Lysinibacillus, Niallia, Priestia, Robertmurraya, Proteiniclasticum (Firmicutes phylum), and Luteimonas (Proteobacteria phylum) were identified, genera that were not observed in the metabarcoding data. The volatile solids, volatile organic acids, and total inorganic carbon reached 659.10 g kg^-1, 717.70 g kg^-1, 70,005.0 g kg^-1, respectively. The cultured groups are involved in the metabolism of sugars and other compounds derived from lignocellulosic material, as well as in anaerobic methane production processes. The results demonstrate that culture-dependent approaches, such as isolation and sequencing, and culture-independent studies, such as the Metabarcoding approach, are complementary methodologies that, when integrated provide robust and comprehensive information about the microbial communities involved in processes of the production of biogas in anaerobic digestion processes.

Unveiling the characterization and development of prokaryotic community during the start-up and long-term operation of a pilot-scale anaerobic membrane bioreactor for the treatment of real municipal wastewater

The anaerobic membrane bioreactor (AnMBR) is a promising sustainable process and technology for the treatment of municipal wastewater from the perspective of carbon neutrality. In this study, a large pilot-scale AnMBR was constructed and the microbial community development of the anaerobic digested sludge in the AnMBR was determined during the treatment of municipal wastewater. The AnMBR system was conducted for 217 days during a long-term operation with the feed of real municipal wastewater. The characterization and dynamics of the microorganisms revealed that a stable prokaryotic community was gradually achieved. In the community of methane-producing archaea (or methanogens), the acetotrophic methanogen Methanosaeta was significantly enriched at an ambient temperature of 25 °C with an overwhelming relative abundance in the entire community. The abundance of Methanosaeta was even higher than the most abundant bacterial phyla Chloroflexi, Firmicutes, Proteobacteria and Bacteroidetes. This phenomenon is quite different from that found in other typical anaerobic systems. The massive enrichment of methanogens is the key to maintaining stable methane production in the treatment of municipal wastewater by the AnMBR. The interspecies cooperation of major functional bacterial groups including protein/carbohydrate/cellulose-degrading (genera Anaerovorax, Aminomonas, Levilinea, Flexilinea and Ruminococcus etc.), sulfate-reducing (Desulfovibrio and Desulfomicrobium etc.) and syntrophic (Syntrophorhabdus and Syntrophus etc.) bacteria with acetotrophic and hydrogenotrophic archaea enhances the stability of reactor operation and help to acclimate the entire prokaryotic community to the characteristics of real municipal wastewater.

Synergistic digestion of banana pseudo-stems with chicken manure to improve methane production: Semi-continuous manipulation and microbial community analysis

This study aimed to investigate the interactions between banana pseudo-stems (BPS) and chicken manure (CM) during anaerobic co-digestion (AcoD) in batch and semi-continuous experiments. The batch experiments results showed that the methane yield was the highest (193.7 mL/g VS) in AcoD with BPS: CM ratio of 4:1, which was increased by 57.2% and 66.1%, respectively. Semi-continuous experiments revealed that AcoD resulted in higher methane production. Monitoring of the system parameters indicated that AcoD could better adapt to the increasing organic loading rate, with better system stability and methane production efficiency. The microbial analysis illustrated that AcoD increased the relative abundance of hydrolytic bacteria such as Firmicutes, Patescibacteria, and Bacteroidetes. With regard to archaea, AcoD improved the abundance of Methanosaeta, the major acetoclastic methanogens. These changes in the microbial flora allowed AcoD to remain stable while efficiently producing methane and improved the BPS and CM processing efficiency.

Review on integrated biofuel production from microalgal biomass through the outset of transesterification route: a cascade approach for sustainable bioenergy

In recent years, microalgal feedstocks have gained immense potential for sustainable biofuel production. Thermochemical, biochemical conversions and transesterification processes are employed for biofuel production. Especially, the transesterification process of lipid molecules to fatty acid alkyl esters (FAAE) is being widely employed for biodiesel production. In the case of the extractive transesterification process, biodiesel is produced from the extracted microalgal oil. Whereas In-situ (reactive) transesterification allows the direct conversion of microalgae to biodiesel avoiding the sequential steps, which subsequently reduces the production cost. Though microalgae have the highest potential to be an alternate renewable feedstock, the minimization of biofuel production cost is still a challenge. The biorefinery approaches that rely on simple cascade processes involving cost-effective technologies are the need of an hour for sustainable bioenergy production using microalgae. At the same time, combining the biorefineries for both (i) high value-low volume (food and health supplements) and (ii) low value- high volume (waste remediation, bioenergy) from microalgae involves regulatory and technical problems. Waste-remediation and algal biorefinery were extensively reviewed in many previous reports. On the other hand, this review focuses on the cascade processes for efficient utilization of microalgae for integrated bioenergy production through the transesterification. Microalgal biomass remnants after the transesterification process, comprising carbohydrates as a major component (process flow A) or the carbohydrate fraction after bio-separation of pretreated microalgae (process flow B) can be utilized for bioethanol production. Therefore, this review concentrates on the cascade flow of integrated bioprocessing methods for biodiesel and bioethanol production through the transesterification and biochemical routes. The review also sheds light on the recent combinatorial approaches of transesterification of microalgae. The applicability of spent microalgal biomass residue for biogas and other applications to bring about zero-waste residue are discussed. Furthermore, techno-economic analysis (TEA), life cycle assessment (LCA) and challenges of microalgal biorefineries are discussed.

Database Mining to Unravel the Ecology of the Phylum Chloroflexi in Methanogenic Full Scale Bioreactors

Although microbial communities of anaerobic bioreactors have been extensively studied using DNA-based tools, there are still several knowledge gaps regarding the microbiology of the process, in particular integration of all generated data is still limited. One understudied core phylum within anaerobic bioreactors is the phylum Chloroflexi, despite being one of the most abundant groups in anaerobic reactors. In order to address the abundance, diversity and phylogeny of this group in full-scale methanogenic reactors globally distributed, a compilation of 16S ribosomal RNA gene sequence data from 62 full-scale methanogenic reactors studied worldwide, fed either with wastewater treatment anaerobic reactors (WTARs) or solid-waste treatment anaerobic reactors (STARs), was performed. One of the barriers to overcome was comparing data generated using different primer sets and different sequencing platforms. The sequence analysis revealed that the average abundance of Chloroflexi in WTARs was higher than in STARs. Four genera belonging to the Anaerolineae class dominated both WTARs and STARs but the core populations were different. According to the phylogenetic analysis, most of the sequences formed clusters with no cultured representatives. The Anaerolineae class was more abundant in reactors with granular biomass than in reactors with disperse biomass supporting the hypothesis that Anaerolineae play an important role in granule formation and structure due to their filamentous morphology. Cross-study comparisons can be fruitfully used to understand the complexity of the anaerobic digestion process. However, more efforts are needed to standardize protocols and report metadata information.

Synergistic Co-Digestion of Microalgae and Primary Sludge to Enhance Methane Yield from Temperature-Phased Anaerobic Digestion

A two-stage temperature-phased mesophilic anaerobic digestion assay was carried out to study the interaction between various biological pretreatment conditions and the possible synergistic co-digestion of microalgae and primary sludge. The study of growth kinetics of the biochemical methane potential test revealed that a maximum of 36% increase in methane yield was observed from co-digestion of a substrate pretreated by thermophilic aerobic conditions (55 °C and HRT = 2 days) and an 8.3% increase was obtained from the anaerobic pretreated substrate (55 °C and HRT = 3 days). Moreover, no synergistic effects on methane yields were observed in co-digesting the substrate pretreated with high temperature (85 °C). The study also identified specific conditions in which interaction between biological pretreatment and co-digestion might substantially reduce methane yield. Careful optimization of operating conditions, both aerobic and anaerobic pretreatment at moderate thermophilic conditions, can be used as a biological pretreatment to enhance methane yield from the co-digestion of microalgae and primary sludge.

Assessment of Chlorella sp. as a potential feedstock for biological methane production

Microalgal biomass sequestrates CO2 and is regarded as a promising renewable feedstock for anaerobic digestion because of its adequate carbohydrate content and lignin-free structure. This study optimizes the dilute-acid pretreatment of Chlorella sp. and subsequent biomethane production using response surface methodology and central composite design with temperature, pretreatment time and solid-to-liquid ratio as variables. A temperature of 64.1 °C, pretreatment time of 1.2 h, and a solid to liquid ratio of 0.29 were the optimal pretreatment conditions and resulted in a methane yield of 302.22 mL CH4/g COD and methane production rate of 110.04 mL CH4/g VSS-d. The severity factor of 1.5-1.6 was adequate to render the Chlorella sp. bioavailable for high methane recovery. The results obtained from the experiments conformed to those predicted by the model. This study effectively utilizes algal biomass for biomethane production and enables the possibility of scaled-up studies using a closed-loop approach.