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Jia P, Tian M, Zhang B, Wu X, He X, Zhang W. Habitat changes due to glacial freezing and melting reshape microbial networks. ENVIRONMENT INTERNATIONAL 2024; 189:108788. [PMID: 38838490 DOI: 10.1016/j.envint.2024.108788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Revised: 05/15/2024] [Accepted: 05/29/2024] [Indexed: 06/07/2024]
Abstract
The phenomenon of glacial freezing and thawing involves microbial sequestration, release, and colonization, which has the potential to impact ecosystem functioning through changes in microbial diversity and interactions. In this study, we examined the structural features of microbial communities of the Dongkemadi glacier, including bacteria, fungi, and archaea, in four distinct glacial environments (snow, ice, meltwater, and frontier soil). The sequestration, release, and colonization of glacial microbes have been found to significantly impact the diversity and structure of glacial microbial communities, as well as the complexity of microbial networks. Specifically, the complexity of bacterial networks has been observed to increase in a sequential manner during these processes. Utilizing the Inter-Domain Ecological Network approach, researchers have further explored the cross-trophic interactions among bacteria, fungi, and archaea. The complexity of the bacteria-fungi-archaea network exhibited a sequential increase due to the processes of sequestration, release, and colonization of glacial microbes. The release and colonization of glacial microbes led to a shift in the role of archaea as key species within the network. Additionally, our findings suggest that the hierarchical interactions among various microorganisms contributed to the heightened complexity of the bacteria-fungi-archaea network. The primary constituents of the glacial microbial ecosystem are unclassified species associated with the Polaromonas. It is noteworthy that various key species in glacial ecosystems are influenced by the distinct environmental factors. Moreover, our findings suggest that key species are not significantly depleted in response to abrupt alterations in individual environmental factors, shedding light on the dynamics of microbial cross-trophic interactions within glacial ecosystems.
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Affiliation(s)
- Puchao Jia
- Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mao Tian
- Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Cryospheric Sciences and Frozen Soil Engineering, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Binglin Zhang
- Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Cryospheric Sciences and Frozen Soil Engineering, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Xiukun Wu
- Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Xiaobo He
- Key Laboratory of Cryospheric Sciences and Frozen Soil Engineering, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Tanggula Mountain Cryosphere and Environment Observation and Research Station of Tibet Autonomous Region, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Wei Zhang
- Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; Key Laboratory of Extreme Environmental Microbial Resources and Engineering of Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China.
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Zhou X, Wang X, Ma Y, Wang Y, Ma Y, Xie L. Fertilization can accelerate the pace of soil microbial community response to rest-grazing duration in the three-river source region of China. Ecol Evol 2023; 13:e10734. [PMID: 38020678 PMCID: PMC10680436 DOI: 10.1002/ece3.10734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 10/25/2023] [Accepted: 10/31/2023] [Indexed: 12/01/2023] Open
Abstract
Overgrazing leads to grassland degradation and productivity decline. Rest-grazing during the regreen-up period can quickly restore grassland and fertilization is a common restoration strategy. However, the effects of rest-grazing time and fertilization on soil microorganisms are unclear in the alpine grasslands. Therefore, the experiment of rest-grazing time and fertilization was carried out to explore the response of soil microorganisms to rest-grazing time and fertilization measures. A field control experiment with rest-grazing time and fertilization as factors have been conducted from the time when grass returned to green till the livestock moved to the summer pasture in Dawu Town of Maqin County of China. The primary treatment we established was the five rest-grazing time, including rest-grazing time of 20 days, 30 days, 40 days, 50 days, and traditional grazing was used as a check group. At the same time, the secondary treatment was nitrogen addition of 300 kg·hm-2 in each primary treatment. The results showed that the total phospholipid fatty acid (total PLFA), actinomyces (Act), and arbuscular mycorrhizal fungi (AMF) showed an ever-increasing biomass with the increase of rest-grazing time and the highest was at 50 days of rest-grazing, and they were all significantly higher than CK. In addition, soil microbial biomass carbon-nitrogen ratio (MBC/MBN) had great influence on the change of microbial community. Applying nitrogen fertilizer can increase the maximum value of biomass of all PLFA groups and the biomass of all PLFA groups changed in an "inverted V" shape with the increase of rest-grazing time. Besides, instead of MBC/MBN, NO3 --N was positively correlated with the biomass of all PLFA groups, which actively regulated the trend of microbial functions. The longer rest-grazing time is more conducive to the biomass of all PLFA groups. However, applying nitrogen fertilizer could break this pattern, namely, the 30 days rest-grazing would be beneficial to the biomass of all PLFA groups. These findings provide key information that rest-grazing during the regreen-up period is benefiscial to the all PLFA groups and fertilization could change the response of microorganisms to rest-grazing, which provide reference measures for the restoration of degraded alpine meadows.
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Affiliation(s)
- Xuanbo Zhou
- Academy of Animal Husbandry and Veterinary Sciences, Key Laboratory of Alpine Grassland Ecosystem in the Three‐River‐Source (Qinghai University), Ministry of Education, Qinghai Provincial Key Laboratory of Adaptive Management on Alpine GrasslandQinghai UniversityXiningQinghaiChina
| | - Xiaoli Wang
- Academy of Animal Husbandry and Veterinary Sciences, Key Laboratory of Alpine Grassland Ecosystem in the Three‐River‐Source (Qinghai University), Ministry of Education, Qinghai Provincial Key Laboratory of Adaptive Management on Alpine GrasslandQinghai UniversityXiningQinghaiChina
| | - Yushou Ma
- Academy of Animal Husbandry and Veterinary Sciences, Key Laboratory of Alpine Grassland Ecosystem in the Three‐River‐Source (Qinghai University), Ministry of Education, Qinghai Provincial Key Laboratory of Adaptive Management on Alpine GrasslandQinghai UniversityXiningQinghaiChina
| | - Yanlong Wang
- Academy of Animal Husbandry and Veterinary Sciences, Key Laboratory of Alpine Grassland Ecosystem in the Three‐River‐Source (Qinghai University), Ministry of Education, Qinghai Provincial Key Laboratory of Adaptive Management on Alpine GrasslandQinghai UniversityXiningQinghaiChina
| | - Yuan Ma
- Academy of Animal Husbandry and Veterinary Sciences, Key Laboratory of Alpine Grassland Ecosystem in the Three‐River‐Source (Qinghai University), Ministry of Education, Qinghai Provincial Key Laboratory of Adaptive Management on Alpine GrasslandQinghai UniversityXiningQinghaiChina
| | - Lele Xie
- Academy of Animal Husbandry and Veterinary Sciences, Key Laboratory of Alpine Grassland Ecosystem in the Three‐River‐Source (Qinghai University), Ministry of Education, Qinghai Provincial Key Laboratory of Adaptive Management on Alpine GrasslandQinghai UniversityXiningQinghaiChina
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Dong H, Xie L, Cao H, Zhang Y, Liu Y, Xing J, Fu X, Wang J, Han D, Zhong H, Luo C, Qu Y, Ni H, Wang J. Propagation strategies of Deyeuxia angustifolia in heterogeneous habitats. Front Ecol Evol 2023. [DOI: 10.3389/fevo.2023.1082661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023] Open
Abstract
Plants utilize different strategies in different environments to maximize population expansion. Understanding plant reproductive strategies in heterogeneous habitats is therefore important for explaining plant ecological adaptability, and for effectively managing and conserving ecosystems. We wanted to explore the reproductive strategy transformation of D. angustifolia in heterogeneous habitats, as well as the environmental factors driving and affecting its reproductive characteristics. To do this we measured the reproductive characteristics of D. angustifolia, as well as the soil physical and chemical properties of these heterogeneous habitats. The density, biomass per unit area, and proportion of aboveground biomass in swampy meadows were significantly higher compared to other habitats. The proportion of rhizome node buds gradually increased from swampy to typical to miscellaneous grass meadows, while the proportion of tillering node buds decreased. The allocation of sexual reproduction within D. angustifolia populations was significantly and positively correlated with plant rhizome biomass and negatively correlated with the number of tillering node buds. The propagation strategies of D. angustifolia in heterogeneous habitats were consistent with CSR theory (Competitor, Stress-tolerator, and Ruderal). The proportions of inflorescence (2.07 ± 0.52%; 1.01 ± 0.15%) and root (23.8 ± 1.5%; 19.6 ± 1.4%) biomass in miscellaneous and typical meadows were high, which tended toward the “Ruderal” adaptation strategy. In swampy meadow, D. angustifolia invested mostly in vegetative growth to produce tiller node buds (14426.67 buds/m2; 46%) and ramets (1327.11 ± 102.10 plants/m2), which is characteristic of the “Competitor” strategy. Swamp D. angustifolia resisted flooding by maintaining a resource balance in its body, and was therefore biased toward the “Stress-tolerator” strategy. Environmental factors accounted for 74.63% of reproductive characteristic variation, in which the interpretative proportions of soil water content, dissolved organic carbon, ammonia nitrogen, and nitrate nitrogen were significant (p < 0.01). When soil water content, dissolved organic carbon, and nitrate nitrogen increased, D. angustifolia tended toward the C strategy; in contrast, when soil water content decreased, amine nitrogen and available phosphorus increased, and D. angustifolia tended toward the R strategy. In a stressful environment, the escape mechanism constitutes an increased rhizome and sexual reproduction investment. In contrast, for suitable habitats, tillering node buds increased in order to expand the population via new plant production, which was the propagation strategy of D. angustifolia in heterogeneous habitats.
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Environmental DNA Metabarcoding: A Novel Contrivance for Documenting Terrestrial Biodiversity. BIOLOGY 2022; 11:biology11091297. [PMID: 36138776 PMCID: PMC9495823 DOI: 10.3390/biology11091297] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 08/24/2022] [Accepted: 08/26/2022] [Indexed: 12/20/2022]
Abstract
Simple Summary The innovative concept of environmental DNA has found its foot in aquatic ecosystems but remains an unexplored area of research concerning terrestrial ecosystems. When making management choices, it is important to understand the rate of eDNA degradation, the persistence of DNA in terrestrial habitats, and the variables affecting eDNA detectability for a target species. Therefore an attempt has been made to provide comprehensive information regarding the exertion of eDNA in terrestrial ecosystems from 2012 to 2022. The information provided will assist ecologists, researchers and decision-makers in developing a holistic understanding of environmental DNA and its applicability as a biodiversity monitoring contrivance. Abstract The dearth of cardinal data on species presence, dispersion, abundance, and habitat prerequisites, besides the threats impeded by escalating human pressure has enormously affected biodiversity conservation. The innovative concept of eDNA, has been introduced as a way of overcoming many of the difficulties of rigorous conventional investigations, and is hence becoming a prominent and novel method for assessing biodiversity. Recently the demand for eDNA in ecology and conservation has expanded exceedingly, despite the lack of coordinated development in appreciation of its strengths and limitations. Therefore it is pertinent and indispensable to evaluate the extent and significance of eDNA-based investigations in terrestrial habitats and to classify and recognize the critical considerations that need to be accounted before using such an approach. Presented here is a brief review to summarize the prospects and constraints of utilizing eDNA in terrestrial ecosystems, which has not been explored and exploited in greater depth and detail in such ecosystems. Given these obstacles, we focused primarily on compiling the most current research findings from journals accessible in eDNA analysis that discuss terrestrial ecosystems (2012–2022). In the current evaluation, we also review advancements and limitations related to the eDNA technique.
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