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Kamikawa T, Hashimoto A, Yamazaki N, Adachi J, Matsushima A, Kikuchi K, Hori Y. Bioisostere-conjugated fluorescent probes for live-cell protein imaging without non-specific organelle accumulation. Chem Sci 2024; 15:8097-8105. [PMID: 38817570 PMCID: PMC11134342 DOI: 10.1039/d3sc06957e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Accepted: 04/26/2024] [Indexed: 06/01/2024] Open
Abstract
Specific labeling of proteins using membrane-permeable fluorescent probes is a powerful technique for bioimaging. Cationic fluorescent dyes with high fluorescence quantum yield, photostability, and water solubility provide highly useful scaffolds for protein-labeling probes. However, cationic probes generally show undesired accumulation in organelles, which causes a false-positive signal in localization analysis. Herein, we report a design strategy for probes that suppress undesired organelle accumulation using a bioisostere for intracellular protein imaging in living cells. Our design allows the protein labeling probes to possess both membrane permeability and suppress non-specific accumulation and has been shown to use several protein labeling systems, such as PYP-tag and Halo tag systems. We further developed a fluorogenic PYP-tag labeling probe for intracellular proteins and used it to visualize multiple localizations of target proteins in the intracellular system. Our strategy offers a versatile design for undesired accumulation-suppressed probes with cationic dye scaffolds and provides a valuable tool for intracellular protein imaging.
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Affiliation(s)
- Takuya Kamikawa
- Graduate School of Science, Kyushu University 744 Motooka Nishi Fukuoka 819-0395 Japan
| | - Akari Hashimoto
- Graduate School of Engineering, Osaka University Suita Osaka 565-0871 Japan
| | - Nozomi Yamazaki
- Graduate School of Engineering, Osaka University Suita Osaka 565-0871 Japan
| | - Junya Adachi
- Faculty of Science, Kyushu University, Fukuoka Fukuoka 819-0395 Japan
| | - Ayami Matsushima
- Faculty of Science, Kyushu University, Fukuoka Fukuoka 819-0395 Japan
| | - Kazuya Kikuchi
- Graduate School of Engineering, Osaka University Suita Osaka 565-0871 Japan
- Immunology Frontier Research Center, Osaka University Suita Osaka 565-0871 Japan
| | - Yuichiro Hori
- Faculty of Science, Kyushu University, Fukuoka Fukuoka 819-0395 Japan
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2
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Oliden-Sánchez A, Sola-Llano R, Pérez-Pariente J, Gómez-Hortigüela L, Martínez-Martínez V. Confinement of a Styryl Dye into Nanoporous Aluminophosphates: Channels vs. Cavities. Int J Mol Sci 2024; 25:3577. [PMID: 38612388 PMCID: PMC11011965 DOI: 10.3390/ijms25073577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Revised: 03/07/2024] [Accepted: 03/13/2024] [Indexed: 04/14/2024] Open
Abstract
Styryl dyes are generally poor fluorescent molecules inherited from their flexible molecular structures. However, their emissive properties can be boosted by restricting their molecular motions. A tight confinement into inorganic molecular sieves is a good strategy to yield highly fluorescent hybrid systems. In this work, we compare the confinement effect of two Mg-aluminophosphate zeotypes with distinct pore systems (the AEL framework, a one-dimensional channeled structure with elliptical pores of 6.5 Å × 4.0 Å, and the CHA framework, composed of large cavities of 6.7 Å × 10.0 Å connected by eight-ring narrower windows) for the encapsulation of 4-DASPI styryl dye (trans-4-[4-(Dimethylamino)styryl]-1-methylpyridinium iodide). The resultant hybrid systems display significantly improved photophysical features compared to 4-DASPI in solution as a result of tight confinement in both host inorganic frameworks. Molecular simulations reveal a tighter confinement of 4-DASPI in the elliptical channels of AEL, explaining its excellent photophysical properties. On the other hand, a singular arrangement of 4-DASPI dye is found when confined within the cavity-based CHA framework, where the 4-DASPI molecule spans along two adjacent cavities, with each aromatic ring sitting on these adjacent cavities and the polymethine chain residing within the narrower eight-ring window. However, despite the singularity of this host-guest arrangement, it provides less tight confinement for 4-DASPI than AEL, resulting in a slightly lower quantum yield.
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Affiliation(s)
- Ainhoa Oliden-Sánchez
- Departamento de Química Física, Universidad del País Vasco (UPV/EHU), Apartado 644, 48080 Bilbao, Spain; (A.O.-S.); (R.S.-L.)
| | - Rebeca Sola-Llano
- Departamento de Química Física, Universidad del País Vasco (UPV/EHU), Apartado 644, 48080 Bilbao, Spain; (A.O.-S.); (R.S.-L.)
| | - Joaquín Pérez-Pariente
- Instituto de Catálisis y Petroleoquímica (CSIC), c/Marie Curie 2, Cantoblanco, 28049 Madrid, Spain;
| | - Luis Gómez-Hortigüela
- Instituto de Catálisis y Petroleoquímica (CSIC), c/Marie Curie 2, Cantoblanco, 28049 Madrid, Spain;
| | - Virginia Martínez-Martínez
- Departamento de Química Física, Universidad del País Vasco (UPV/EHU), Apartado 644, 48080 Bilbao, Spain; (A.O.-S.); (R.S.-L.)
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3
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Peng F, Ai X, Sun J, Yang L, Gao B. Recent advances in FRET probes for mitochondrial imaging and sensing. Chem Commun (Camb) 2024; 60:2994-3007. [PMID: 38381520 DOI: 10.1039/d4cc00018h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/23/2024]
Abstract
Mitochondria, as essential organelles in cells, play a crucial role in cellular growth and apoptosis. Monitoring mitochondria is of great importance, as mitochondrial dysfunction is often considered a hallmark event of cell apoptosis. Traditional fluorescence probes used for mitochondrial imaging and sensing are mostly intensity-based and are susceptible to factors such as concentration, the probe environment, and fluorescence intensity. Probes based on fluorescence resonance energy transfer (FRET) can effectively overcome external interference and achieve high-contrast imaging of mitochondria as well as quantitative monitoring of mitochondrial microenvironments. This review focuses on recent advances in the application of FRET-based probes for mitochondrial structure imaging and microenvironment sensing.
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Affiliation(s)
- Fei Peng
- College of Chemistry and Materials Science, Hebei University, Baoding, 071002, China.
| | - Xiangnan Ai
- College of Chemistry and Materials Science, Hebei University, Baoding, 071002, China.
| | - Jing Sun
- College of Chemistry and Materials Science, Hebei University, Baoding, 071002, China.
| | - Linshuai Yang
- College of Chemistry and Materials Science, Hebei University, Baoding, 071002, China.
| | - Baoxiang Gao
- College of Chemistry and Materials Science, Hebei University, Baoding, 071002, China.
- Key Laboratory of Analytical Science and Technology of Hebei Province, Hebei University, Baoding 071002, Hebei, China
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4
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Dubey Y, Mahalingavelar P, Rajput D, Shewale DJ, Soppina V, Kanvah S. Fluorescent styryl pyridine- N-oxide probes for imaging lipid droplets. Org Biomol Chem 2023; 21:8393-8402. [PMID: 37819137 DOI: 10.1039/d3ob01365k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/13/2023]
Abstract
Lipid droplets (LDs) have emerged as major regulators of cellular metabolism, encompassing lipid storage, membrane synthesis, viral replication, and protein degradation. Exclusive studies have suggested a direct link between LDs and cancer, as a notable abundance of LDs is found in cancerous cells. Therefore, monitoring the location, distribution, and movements of LDs is of paramount importance for understanding their involvement in biological processes. To target LDs, we designed and synthesized fluorophores with a styryl scaffold bearing electron-donating amino groups and pyridine-N-oxide, a zwitterionic acceptor moiety. We explored their photophysical properties in various solvents and conducted systematic DFT calculations on the synthesized fluorescent molecules, comparing them with neutral pyridine and cationic pyridinium styryl dyes. The results demonstrate that diphenylaminostyryl pyridine-N-oxide (TNO) shows excellent imaging of LDs, in contrast to the behavior of cationic styrylpyridinium (TNC), which primarily localizes within the mitochondria. Notably, pyridine N-oxide offers several benefits: an increased dipole moment facilitating charge separation between donors and acceptors, substantial HOMO and LUMO stabilization, improved water solubility, favorable redox properties, and bathochromic-shifted absorption/emission spectra, showing promise as a fluorescent tool for probing the cellular-biological realm.
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Affiliation(s)
- Yogesh Dubey
- Department of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar, Gujarat-382055, India.
| | | | - Deeksha Rajput
- Department of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar, Gujarat-382055, India.
| | - Dipeshwari J Shewale
- Department of Biological Engineering, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar, Gujarat-382055, India.
| | - Virupakshi Soppina
- Department of Biological Engineering, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar, Gujarat-382055, India.
| | - Sriram Kanvah
- Department of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar, Gujarat-382055, India.
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5
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Wickramasinghe NI, Corbin B, Kanakarathna DY, Pang Y, Abeywickrama CS, Wijesinghe KJ. Bright NIR-Emitting Styryl Pyridinium Dyes with Large Stokes' Shift for Sensing Applications. BIOSENSORS 2023; 13:799. [PMID: 37622885 PMCID: PMC10452306 DOI: 10.3390/bios13080799] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2023] [Revised: 08/02/2023] [Accepted: 08/07/2023] [Indexed: 08/26/2023]
Abstract
Two NIR-emitting donor-π-acceptor (D-π-A) type regioisomeric styryl pyridinium dyes (1a-1b) were synthesized and studied for their photophysical performance and environment sensitivity. The two regioisomers, 1a and 1b, exhibited interesting photophysical properties including, longer wavelength excitation (λex ≈ 530-560 nm), bright near-infrared emission (λem ≈ 690-720 nm), high-fluorescence quantum yields (ϕfl ≈ 0.24-0.72) large Stokes' shift (∆λ ≈ 150-240 nm) and high-environmental sensitivity. Probe's photophysical properties were studied in different environmental conditions such as polarity, viscosity, temperature, and concentration. Probes (1a-1b) exhibited noticeable changes in absorbance, emission and Stokes' shift while responding to the changes in physical environment. Probe 1b exhibited a significant bathochromic shift in optical spectra (∆λ ≈ 20-40 nm) compared to its isomer 1a, due to the regio-effect. Probes (1a-1b) exhibited an excellent ability to visualize bacteria (Bacillus megaterium, Escherichia coli), and yeast (Saccharomyces cerevisiae) via fluorescence microscopy.
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Affiliation(s)
| | - Brian Corbin
- Department of Chemistry, The University of Akron, Akron, OH 44325, USA
| | - Devni Y. Kanakarathna
- Department of Chemistry, Faculty of Science, University of Colombo, Colombo 00300, Sri Lanka
| | - Yi Pang
- Department of Chemistry, The University of Akron, Akron, OH 44325, USA
| | | | - Kaveesha J. Wijesinghe
- Department of Chemistry, Faculty of Science, University of Colombo, Colombo 00300, Sri Lanka
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6
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Fang M, Zhou X, Wang S, Yang Y, Cheng Y, Wang B, Rong X, Zhang X, Xu K, Zhang Y, Zheng S. A novel near-infrared fluorescent probe with hemicyanine scaffold for sensitive mitochondrial pH detection and mitophagy study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 298:122791. [PMID: 37141839 DOI: 10.1016/j.saa.2023.122791] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Revised: 04/21/2023] [Accepted: 04/25/2023] [Indexed: 05/06/2023]
Abstract
Mitochondria, as an energy-producing powerhouse in live cells, is considered to be directly linked to cellular health. However, dysfunctional mitochondria and abnormal mitochondria pH would possibly activate mitophagy, cell apoptosis and intercellular acidification process. In this work, we synthesized a novel near infrared fluorescent probe (FNIR-pH) for measurement of mitochondrial pH based on the hemicyanine skeleton as a fluorophore. The FNIR-pH probe functioned as a mitochondrial pH substrate and exhibited quick and sensitive turn-on fluorescence responses to mitochondrial pH in basic solution due to the deprotonation of hydroxy group in the structure. From pH 3.0 to 10.0, the FNIR-pH exhibited almost 100-fold increase in fluorescence intensity at 766 nm wavelength. The FNIR-pH also displayed superior selectivity to various metal ions, excellent photostability, and low cytotoxicity, which facilitated further biological application. Owing to the proper pKa value of 7.2, the FNIR-pH paved the way for real-time monitoring of mitochondria pH changes in live cells and sensitive sensing of mitophagy. Moreover, the FNIR-pH probe was also implemented for fluorescent imaging of tumor-bearing mice to validate its potential application for in vivo imaging of bioanalytes and biomarkers.
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Affiliation(s)
- Mingxi Fang
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China; Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Xiaoyu Zhou
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China
| | - Shaocai Wang
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China
| | - Yinshuang Yang
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China
| | - Yueting Cheng
- College of Chemistry and Chemical Engineering, Yangtze Normal University, Fuling, Chongqing 408100, PR China
| | - Boling Wang
- College of Chemistry and Chemical Engineering, Yangtze Normal University, Fuling, Chongqing 408100, PR China
| | - Xiaoqian Rong
- College of Chemistry and Chemical Engineering, Yangtze Normal University, Fuling, Chongqing 408100, PR China
| | - Xiuli Zhang
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China
| | - Kai Xu
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China.
| | - Yibin Zhang
- College of Chemistry and Chemical Engineering, Yangtze Normal University, Fuling, Chongqing 408100, PR China.
| | - Shaohui Zheng
- School of Medical Imaging, Xuzhou Medical University, Xuzhou, Jiangsu 221006, PR China.
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7
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Crawford H, Dimitriadi M, Bassin J, Cook MT, Abelha TF, Calvo‐Castro J. Mitochondrial Targeting and Imaging with Small Organic Conjugated Fluorophores: A Review. Chemistry 2022; 28:e202202366. [PMID: 36121738 PMCID: PMC10092527 DOI: 10.1002/chem.202202366] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Indexed: 12/30/2022]
Abstract
The last decade has seen an increasingly large number of studies reporting on the development of novel small organic conjugated systems for mitochondrial imaging exploiting optical signal transduction pathways. Mitochondria are known to play a critical role in a number of key biological processes, including cellular metabolism. Importantly, irregularities on their working function are nowadays understood to be intimately linked to a range of clinical conditions, highlighting the importance of targeting mitochondria for therapeutic benefits. In this work we carry out an in-depth evaluation on the progress to date in the field to pave the way for the realization of superior alternatives to those currently existing. The manuscript is structured by commonly used chemical scaffolds and comprehensively covers key aspects factored in design strategies such as synthetic approaches as well as photophysical and biological characterization, to foster collaborative work among organic and physical chemists as well as cell biologists.
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Affiliation(s)
- Hannah Crawford
- School of Life and Medical SciencesUniversity of HertfordshireAL109ABHatfieldUK
| | - Maria Dimitriadi
- School of Life and Medical SciencesUniversity of HertfordshireAL109ABHatfieldUK
| | - Jatinder Bassin
- School of Life and Medical SciencesUniversity of HertfordshireAL109ABHatfieldUK
| | - Michael T. Cook
- School of Life and Medical SciencesUniversity of HertfordshireAL109ABHatfieldUK
| | - Thais Fedatto Abelha
- Department of Pharmacology, Toxicology and Therapeutic ChemistryFaculty of Pharmacy and Food ScienceUniversity of Barcelona08028BarcelonaSpain
- Institute of Nanoscience and NanotechnologyUniversity of Barcelona (IN2UB)08028BarcelonaSpain
| | - Jesus Calvo‐Castro
- School of Life and Medical SciencesUniversity of HertfordshireAL109ABHatfieldUK
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8
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Abeywickrama CS. Large Stokes shift benzothiazolium cyanine dyes with improved intramolecular charge transfer (ICT) for cell imaging applications. Chem Commun (Camb) 2022; 58:9855-9869. [PMID: 35983738 DOI: 10.1039/d2cc03880c] [Citation(s) in RCA: 40] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Intramolecular Charge Transfer (ICT) is a crucial photophysical phenomenon that can be used to improve the Stokes' shift in fluorescent dyes. The introduction of molecular asymmetry is a promising approach to mitigate significant drawbacks of the symmetric cyanine dyes due to their narrow Stokes' shifts (Δλ < 20 nm). In this feature article, we discuss recent progress towards improving the Stokes' shift (Δλ > 100 nm) in benzothiazolium-based fluorophore systems via efficient ICT and recent discoveries related to potentially useful live cell imaging applications of these asymmetric cyanine dyes. This article explores three interesting asymmetric benzothiazolium dye designs (D-π-A, π-A and D-π-2A) in detail while discussing their optical properties. The key advantage of these probes is the synthetic tunability of the probe's photophysical properties and cellular selectivity by simply modifying the donor (D) or the acceptor (A) group in the structure. These new asymmetric ICT fluorophore systems exhibit large Stokes' shifts, high biocompatibility, wash-free staining, red to NIR emission and facile excitation with commercially available laser wavelengths.
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Affiliation(s)
- Chathura S Abeywickrama
- Department of Structural Biology, St Jude Children's Research Hospital, Memphis, TN 38105, USA.
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9
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Pinto A, Echeverri M, Gómez-Lor B, Rodríguez L. Highly emissive supramolecular gold(I)-BTD materials. Dalton Trans 2022; 51:8340-8349. [PMID: 35583157 DOI: 10.1039/d2dt00950a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Herein we report the synthesis of three light emitting rod-shaped gold(I) complexes by combining ethynyl-functionalized 2,1,3-benzothiadiazole (BTD), with different N-heterocyclic (imidazole, benzimidazole and phenantroimidazole) carbene gold(I) complexes. As could be determined by single crystal structure determination, the size of the N-heterocyclic carbene affects the relative disposition of the two ligands in the linear gold complexes (nearly perpendicular in the benzimidazole vs. planar in the phenantroimidazole derivative) which translates to different types of interactions between neighbouring units. In fact, the planar conformation in the more π-extended phenantroimidazole carbene allows Au(I) atoms to get sufficiently closer favouring aurophilic interactions. This compound is obtained as two different colour emitting solids which is ascribed to changes in packing modes probably leading to differences in the strength of aurophilic interactions. Interestingly, while the emission in the solid state is almost quenched, the incorporation of the compounds in polymer matrixes enhances the emissive properties of the compounds reaching near unity quantum yields.
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Affiliation(s)
- Andrea Pinto
- Departament de Química Inorgànica i Orgànica, Secció de Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, E-08028 Barcelona, Spain. .,Institut de Nanociència i Nanotecnologia (IN2UB), Universitat de Barcelona, 08028 Barcelona, Spain
| | - Marcelo Echeverri
- Instituto de Ciencia de Materiales de Madrid, CSIC Cantoblanco, 28049 Madrid, Spain.
| | - Berta Gómez-Lor
- Instituto de Ciencia de Materiales de Madrid, CSIC Cantoblanco, 28049 Madrid, Spain.
| | - Laura Rodríguez
- Departament de Química Inorgànica i Orgànica, Secció de Química Inorgànica, Universitat de Barcelona, Martí i Franquès 1-11, E-08028 Barcelona, Spain. .,Institut de Nanociència i Nanotecnologia (IN2UB), Universitat de Barcelona, 08028 Barcelona, Spain
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10
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Bhurta D, Bharate SB. Styryl Group, a Friend or Foe in Medicinal Chemistry. ChemMedChem 2022; 17:e202100706. [PMID: 35166041 DOI: 10.1002/cmdc.202100706] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 02/12/2022] [Indexed: 11/10/2022]
Abstract
The styryl (Ph-CH=CH-R) group is widely represented in medicinally important compounds, including drugs, clinical candidates, and molecular probes as it positively impacts the lipophilicity, oral absorption, and biological activity. The analysis of matched molecular pairs (styryl vs. phenethyl, phenyl, methyl, H) for the biological activity indicates the superiority aspect of styryl compounds. However, the Michael acceptor site in the styryl group makes it amenable to the nucleophilic attack by biological nucleophiles and transformation to the toxic metabolites. One of the downsides of styryl compounds is isomerization that impacts the molecular conformation and directly affects biological activity. The impact of cis-trans isomerism and isosteric replacements on biological activity is exemplified. We also discuss the styryl group-bearing drugs, clinical candidates, and fluorescent probes. Overall, the present review reveals the utility of the styryl group in medicinal chemistry and drug discovery.
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Affiliation(s)
- Deendyal Bhurta
- Council of Scientific & Industrial Research Indian Institute of Integrative Medicine, Natural Products and medicinal chemistry, 180001, Jammu, INDIA
| | - Sandip Bibishan Bharate
- Indian Institute of Integrative Medicine CSIR, Natural Products & Medicinal Chemistry, Canal Road, 180001, Jammu, INDIA
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11
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Bertman KA, Abeywickrama CS, Pang Y. A NIR Emitting Cyanine with Large Stokes' Shift for Mitochondria and Identification of their Membrane Potential Disruption. Chembiochem 2021; 23:e202100516. [PMID: 34783144 DOI: 10.1002/cbic.202100516] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 11/12/2021] [Indexed: 12/11/2022]
Abstract
An NIR emitting (λem ≈730 nm) cyanine probe ExCy was synthesized in good yields by extending the π-conjugation length (i. e., with furan moiety) to the donor-accepter system. ExCy exhibited a large Stokes' shift (Δλ≈100 nm) due to strong intramolecular charge transfer (ICT), and high fluorescence quantum yield (Φfl ≈0.47 in DCM). Due to its low fluorescence in an aqueous environment (Φfl ≈0.007 in H2 O), the probe exhibited the potential of achieving a large fluorescence turn-on upon entering a hydrophobic cellular environment. Fluorescence confocal microscopy studies revealed that ExCy was readily excitable with a far-red laser line (i. e., 640 nm) while the corresponding emission was collected in the NIR region. ExCy exhibited excellent selectivity towards live cell mitochondria according to the co-localization studies. The probe also exhibited high photostability, long-term imaging ability and wash-free staining ability, when being applied to live cells. Our studies indicated that the mitochondrial localization of ExCy was dependent on the membrane potential of the mitochondria. ExCy was successfully utilized as a mitochondrial membrane potential dysfunction indicator to visually identify cells with mitochondrial dysfunction via fluorescence confocal microscopy. ExCy was further examined for potential in vivo imaging of zebrafish.
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Affiliation(s)
- Keti A Bertman
- Department of Chemistry, University of Akron, Akron, Ohio, 44325, USA
| | | | - Yi Pang
- Department of Chemistry, University of Akron, Akron, Ohio, 44325, USA.,Maurice Morton Institute of Polymer Science, University of Akron, Akron, Ohio, 44325, USA
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12
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Abeywickrama CS, Baumann HJ, Pang Y. Simultaneous Visualization of Mitochondria and Lysosome by a Single Cyanine Dye: The Impact of the Donor Group (-NR 2) Towards Organelle Selectivity. J Fluoresc 2021; 31:1227-1234. [PMID: 34297321 DOI: 10.1007/s10895-021-02786-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 07/13/2021] [Indexed: 11/29/2022]
Abstract
A benzothiazolium-based hemicyanine dye (probe 3) has been synthesized by attaching a morpholine group into a phenyl benzothiazolium skeleton. Probe 3 exhibited interesting photophysical characteristics including red emission (λem ≈600 nm), enhanced Stokes shift (Δλ ≈80 nm) and sensitivity to solvent polarity. Although the probe 3 exhibited almost no emission in aqueous environments (φfl ≈0.002), its fluorescence could be increased by ≈50 fold in organic solvents (φfl ≈0.10), making it possible for live cell imaging under wash-free conditions. Probe 3 exhibited excellent ability to visualize cellular mitochondria and lysosomes simultaneously, as observed from fluorescence confocal microscopy. In addition, probe 3 also exhibited good biocompatibility (calculated LC50 > 20 µM) and high photostability.
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Affiliation(s)
- Chathura S Abeywickrama
- Department of Chemistry and Maurice Morton Institute of Polymer Science, University of Akron, Akron, OH, 44325, USA
| | - Hannah J Baumann
- Department of Chemistry and Maurice Morton Institute of Polymer Science, University of Akron, Akron, OH, 44325, USA
| | - Yi Pang
- Department of Chemistry and Maurice Morton Institute of Polymer Science, University of Akron, Akron, OH, 44325, USA.
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13
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Mukherjee T, Soppina V, Ludovic R, Mély Y, Klymchenko AS, Collot M, Kanvah S. Live-cell imaging of the nucleolus and mapping mitochondrial viscosity with a dual function fluorescent probe. Org Biomol Chem 2021; 19:3389-3395. [PMID: 33555275 DOI: 10.1039/d0ob02378g] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Visualization of sub-cellular organelles allows the determination of various cellular processes and the underlying mechanisms. Herein, we report a fluorescent probe, bearing push-pull substituents emitting at 600 nm and its application in cellular imaging. The probe shows dual imaging of mitochondria and nucleoli and maps mitochondrial viscosity in live cells under various physiological variations and show minimum cytotoxicity. Nucleolar staining is confirmed by RNAase digestion.
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Affiliation(s)
- Tarushyam Mukherjee
- Discipline of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar 382355, India.
| | - Virupakshi Soppina
- Discipline of Biological Engineering, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar 382355, India.
| | - Richert Ludovic
- Laboratoire de Bioimagerie et Pathologies, UMR 7021, CNRS/Université de Strasbourg, 74 route du Rhin, 67401 Illkirch-Graffenstaden, France
| | - Yves Mély
- Laboratoire de Bioimagerie et Pathologies, UMR 7021, CNRS/Université de Strasbourg, 74 route du Rhin, 67401 Illkirch-Graffenstaden, France
| | - Andrey S Klymchenko
- Laboratoire de Bioimagerie et Pathologies, UMR 7021, CNRS/Université de Strasbourg, 74 route du Rhin, 67401 Illkirch-Graffenstaden, France
| | - Mayeul Collot
- Laboratoire de Bioimagerie et Pathologies, UMR 7021, CNRS/Université de Strasbourg, 74 route du Rhin, 67401 Illkirch-Graffenstaden, France
| | - Sriram Kanvah
- Discipline of Chemistry, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar 382355, India.
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Abeywickrama CS, Bertman KA, Pang Y. From nucleus to mitochondria to lysosome selectivity switching in a cyanine probe: The phenolic to methoxy substituent conversion affects probe’s selectivity. Bioorg Chem 2020; 99:103848. [DOI: 10.1016/j.bioorg.2020.103848] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 04/05/2020] [Accepted: 04/09/2020] [Indexed: 12/31/2022]
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15
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Abeywickrama CS, Bertman KA, Mcdonald LJ, Alexander N, Dahal D, Baumann HJ, Salmon CR, Wesdemiotis C, Konopka M, Tessier CA, Pang Y. Synthesis of highly selective lysosomal markers by coupling 2-(2'-hydroxyphenyl)benzothiazole (HBT) with benzothiazolium cyanine (Cy): the impact of substituents on selectivity and optical properties. J Mater Chem B 2019; 7:7502-7514. [PMID: 31712794 DOI: 10.1039/c9tb01672d] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
HBT-Cy 1 has been previously reported as a highly selective fluorescent probe for lysosome visualization in live cells. To further investigate the role of the structural components of HBT-Cy in lysosome selectivity, cyanine based fluorescent probe series (2-5) have been synthesized in good yields by connecting benzothiazolium cyanine (Cy) with 2-hydroxyphenylbenzothiazole (HBT) via a meta phenylene ring. Probes 2-5 exhibited exceptional photophysical properties including bright red-emission (λem≈ 630-650 nm), a large Stokes shift (Δλ > 130 nm) and high fluorescence quantum yields (φfl≈ 0.1-0.5). Probes 2, 3, and 5 exhibited exceptional selectivity towards cellular lysosomes in NHLF and MO3.13 cells. Our further study revealed that the phenyl benzothiazolium cyanine component (6) was the lysosome directing group in the HBT-Cy probe structure. The attachment of the hydroxyphenyl benzothiazole (HBT) component to the HBT-Cy probe structure has significantly improved its photophysical properties. Lysosome probes 2, 3 and 5 exhibited excellent biocompatibility, quick staining, bright red fluorescence, and wash-free application for live cell imaging. These probes further exhibited excellent characteristics for bioimaging experiments including a non-alkalinizing nature, high biocompatibility, high photostability and long-term imaging ability (>4 hours).
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Affiliation(s)
| | - Keti A Bertman
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Lucas J Mcdonald
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Nicolas Alexander
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Dipendra Dahal
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Hannah J Baumann
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Carrie R Salmon
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Chrys Wesdemiotis
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Michael Konopka
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Claire A Tessier
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA.
| | - Yi Pang
- Department of Chemistry, University of Akron, Akron, Ohio 44325, USA. and Maurice Morton Institute of Polymer Science, University of Akron, Akron, Ohio 44325, USA
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16
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Imaging mitochondria and plasma membrane in live cells using solvatochromic styrylpyridines. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2019; 203:111732. [PMID: 31864089 DOI: 10.1016/j.jphotobiol.2019.111732] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Revised: 11/20/2019] [Accepted: 12/04/2019] [Indexed: 12/16/2022]
Abstract
Investigating the dynamics of different biomolecules in the cellular milieu through microscopic imaging has gained paramount importance in the last decade. Continuous developments in the field of microscopy are paralleled by the design and synthesis of fluorophores that target specific compartments within a cell. In this study, we have synthesized four fluorescent styrene derivatives, a neutral styrylpridine, three cationic styrylpyridinium probes with and without cholesterol tether, and investigated their absorption, emission, and cellular imaging properties. The fluorophores show solvatochromic emission attributed to intramolecular charge transfer from donor to acceptor with an emission range of 500-600 nm. The fluorescent cholesterol conjugate labels plasma membrane effectively while the fluorophores devoid of the cholesterol tether label mitochondria. Cholesterol conjugate also shows strong interaction with liposome membrane. Furthermore, the fluorophores alsotrack the mitochondria in live cells with high specificity. Cell viability assay showed overall non-toxic nature of the probes even at higher fluorophore concentrations. Through sidearm modifications, keeping the fluorescent core intact, we successfully targeted specific subcellular compartments of neuronal (N2a) and non-neuronal (HeLa) mammalian cell lines. This strategy of using a single molecular scaffold with subtle substitutions could be ideal in generating a variety of fluorophores targeting other subcellular compartments.
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17
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Yang G, Jin X, Chen K, Yang D. Uncovering the excited state trends and ESIPT mechanism for 2-(hydroxy-3-dimethyl-phenyl)-benzooxazole-6-carboxylicacid. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.136815] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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18
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Abeywickrama CS, Bertman KA, Plescia CB, Stahelin RV, Pang Y. Structural Effect on the Cellular Selectivity of an NIR-Emitting Cyanine Probe: From Lysosome to Simultaneous Nucleus and Mitochondria Selectivity with Potential for Monitoring Mitochondria Dysfunction in Cells. ACS APPLIED BIO MATERIALS 2019; 2:5174-5181. [PMID: 35021460 DOI: 10.1021/acsabm.9b00810] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
| | | | - Caroline B. Plescia
- Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States
| | - Robert V. Stahelin
- Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States
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19
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Carvalho PHPR, Correa JR, Paiva KLR, Baril M, Machado DFS, Scholten JD, de Souza PEN, Veiga-Souza FH, Spencer J, Neto BAD. When the strategies for cellular selectivity fail. Challenges and surprises in the design and application of fluorescent benzothiadiazole derivatives for mitochondrial staining. Org Chem Front 2019. [DOI: 10.1039/c9qo00428a] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Design, synthesis, molecular architecture and the unexpected behavior of fluorescent benzothiadiazole for selective mitochondrial and plasma membrane staining are investigated.
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