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Chu J, Zhao X. Target Recognition Initiated Self-Assembly-Based Signal Amplification Strategy for Sensitive and Colorimetric Staphylococcus aureus Detection and Diagnosis of Skin Infection. Mol Biotechnol 2024; 66:1402-1408. [PMID: 37358746 DOI: 10.1007/s12033-023-00791-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Accepted: 06/07/2023] [Indexed: 06/27/2023]
Abstract
Staphylococcus aureus (S. aureus), as a Gram-positive bacterium, is commonly encountered in various infectious diseases, such as acute skin and soft tissue infections. Despite that many efforts have been made, sensitive and reliable quantitative determination of S. aureus remains a huge challenge. Here, we depict a novel colorimetric approach for sensitive and accurate detection by combining allosteric probe-based target recognition and chain extension-based dual signal recycling. The single-strand DNA (ssDNA) products generated by the chain extension process lead to the liberation of G-quadruplex sequences, which can fold into active DNAzyme under the assistance of hemin. The active DNAzyme can work as peroxidase mimics to catalyze the 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS2-)-H2O2 system, causing the color change of the system. Eventually, the method exhibits a wide detection range from 103 cfu/mL to 106 cfu/mL. The limit of detection of the approach was determined 232 cfu/mL. Considering the robust capability of the approach in S. aureus detection, we believe that it will be a potential alternative tool for biomedical research and clinical molecular diagnostics.
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Affiliation(s)
- Juan Chu
- Department of Dermatology, Zhuji Affiliated Hospital of Shaoxing University, No.9 Jianmin Road, Taozhu Street, Zhuji City, 311800, Zhejiang Province, China.
| | - Xiaoqin Zhao
- Department of Dermatology, Zhuji Affiliated Hospital of Shaoxing University, No.9 Jianmin Road, Taozhu Street, Zhuji City, 311800, Zhejiang Province, China.
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Zhang XD, Gu B, Usman M, Tang JW, Li ZK, Zhang XQ, Yan JW, Wang L. Recent Progress in the Diagnosis of Staphylococcus in Clinical Settings. Infect Dis (Lond) 2022. [DOI: 10.5772/intechopen.108524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Staphylococci are mainly found on the skin or in the nose. These bacteria are typically friendly, causing no harm to healthy individuals or resulting in only minor issues that can go away on their own. However, under certain circumstances, staphylococcal bacteria could invade the bloodstream, affect the entire body, and lead to life-threatening problems like septic shock. In addition, antibiotic-resistant Staphylococcus is another issue because of its difficulty in the treatment of infections, such as the notorious methicillin-resistant Staphylococcus aureus (MRSA) which is resistant to most of the currently known antibiotics. Therefore, rapid and accurate diagnosis of Staphylococcus and characterization of the antibiotic resistance profiles are essential in clinical settings for efficient prevention, control, and treatment of the bacteria. This chapter highlights recent advances in the diagnosis of Staphylococci in clinical settings with a focus on the advanced technique of surface-enhanced Raman spectroscopy (SERS), which will provide a framework for the real-world applications of novel diagnostic techniques in medical laboratories via bench-top instruments and at the bedside through point-of-care devices.
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3
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Kim JK, Yun H, Yeom CH, Kim EJ, Kim W, Lee CS, Kim BG, Jeong HJ. Flow cytometry-based rapid detection of Staphylococcus aureus and Pseudomonas aeruginosa using fluorescent antibodies. RSC Adv 2022; 12:34660-34669. [PMID: 36545616 PMCID: PMC9717348 DOI: 10.1039/d2ra05694a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 11/26/2022] [Indexed: 12/04/2022] Open
Abstract
Staphylococcus aureus (S. aureus) and Pseudomonas aeruginosa (P. aeruginosa) are major pathogens frequently detected in food and beverage poisoning, and persistent infections. Therefore, the development of a rapid method that can detect these pathogens before serious multiplication is required. In this study, we established a flow cytometry (FCM)-based detection method that allows rapid acquisition of cell populations in fluid samples by using a fluorescent antibody against S. aureus or P. aeruginosa. Using this method, we detected these pathogens with a 103 to 105 CFU order of limit of detection value within 1 hour. The FCM-based method for the detection of S. aureus and P. aeruginosa offers the possibility of high-throughput analysis of pathogens in food, environmental, and clinical sources.
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Affiliation(s)
- Joo-Kyung Kim
- Interdisciplinary Program for Biochemical Engineering and Biotechnology, Seoul National UniversitySeoul08826South Korea
| | - Hanool Yun
- Department of Biological and Chemical Engineering, Hongik UniversitySejong30016South Korea
| | - Chang-Hun Yeom
- Department of Biological and Chemical Engineering, Hongik UniversitySejong30016South Korea
| | - Eun-Jung Kim
- Bio-MAX/N-Bio, Seoul National UniversitySeoul08826South Korea
| | - Wooseong Kim
- College of Pharmacy and Graduate School of Pharmaceutical Sciences, Ewha Womans UniversitySeoul 03760South Korea
| | - Chang-Soo Lee
- Department of Chemical Engineering and Applied Chemistry, Chungnam National UniversityDaejeon 34134South Korea
| | - Byung-Gee Kim
- Interdisciplinary Program for Biochemical Engineering and Biotechnology, Seoul National UniversitySeoul08826South Korea,Bio-MAX/N-Bio, Seoul National UniversitySeoul08826South Korea
| | - Hee-Jin Jeong
- Department of Biological and Chemical Engineering, Hongik UniversitySejong30016South Korea
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Sandwich Fluorescence Detection of Foodborne Pathogen Staphylococcus aureus with CD Fluorescence Signal Amplification in Food Samples. Foods 2022; 11:foods11070945. [PMID: 35407032 PMCID: PMC8997861 DOI: 10.3390/foods11070945] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 03/16/2022] [Accepted: 03/21/2022] [Indexed: 12/15/2022] Open
Abstract
Timely detection of Staphylococcus aureus (S. aureus) is critical because it can multiply to disease−causing levels in a matter of hours. Herein, a simple and sensitive DNA tetrahedral (Td) fluorescence signal amplifier with blue carbon quantum dots (bCDs) was prepared for sandwich detection of S. aureus. bCD was modified at the apex of Td, and an aptamer on Td was used to accurately identify and “adsorb” the amplifier to the surface of S. aureus. Atomic force microscopy (AFM) demonstrates the successful preparation of this signal amplifier. The fluorescence intensity emitted in this strategy increased 4.72 times. The strategy showed a stronger fluorescence intensity change, sensitivity (linear range of 7.22 × 100–1.44 × 109 CFU/mL with a LOD of 4 CFU/mL), and selectivity. The recovery rate in qualified pasteurized milk and drinking water samples was 96.54% to 104.72%. Compared with simple aptamer sandwich detection, these fluorescence signal amplifiers have improved fluorescence detection of S. aureus. Additionally, this fluorescent signal amplification strategy may be applied to the detection of other food pathogens or environmental microorganisms in the future.
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Rapid and visual detection of viable Staphylococcus aureus in pork and pork products by PMA and saltatory rolling circle amplification. Eur Food Res Technol 2022. [DOI: 10.1007/s00217-022-03990-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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6
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Ultrasensitive microfluidic immunosensor with stir bar enrichment for point-of-care test of Staphylococcus aureus in foods triggered by DNAzyme-assisted click reaction. Food Chem 2022; 378:132093. [PMID: 35032807 DOI: 10.1016/j.foodchem.2022.132093] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 01/03/2022] [Accepted: 01/05/2022] [Indexed: 12/11/2022]
Abstract
This work demonstrated an ultrasensitive and simple microfluidic immunosensor for point-of-care test of Staphylococcus aureus (S. aureus) based on the stir bar enrichment and DNAzyme-assisted click reaction. Initially, S. aureus was enriched by the 4-mercaptophenylboronic acid-functionalized stir bar. The yolk antibody (immunoglobulin Y) and copper-labeled polydopamine nanoparticles were then specifically conjugated with the captured target. The Cu(II) was released under acidic conditions and effectively catalyzed the copper-catalyzed azide-alkyne cycloaddition (CuAAC) between the alkyne group-labeled DNAzyme and the streptavidin-biotin-azido with the assistance of DNAzyme. Finally, the DNAzyme-streptavidin complexes were detected by microfluidic chips to quantify S. aureus. Under optimum conditions, this immunosensor showed good detection performances toward S. aureus within 10 to 2.5 × 104 CFU/mL with a limit of detection of 3 CFU/mL. Moreover, the satisfying detection results of real samples of animal origin also implied that this immunosensor owned great potential in practical applications.
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Liu S, Wang B, Sui Z, Wang Z, Li L, Zhen X, Zhao W, Zhou G. Faster Detection of Staphylococcus aureus in Milk and Milk Powder by Flow Cytometry. Foodborne Pathog Dis 2021; 18:346-353. [PMID: 33667125 DOI: 10.1089/fpd.2020.2894] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
A flow cytometry (FCM)-based method was developed for the faster detection of Staphylococcus aureus in milk and milk powder. Viable S. aureus cells were recognized by highly selective, fluorescently labeled antibodies and Propidium Iodide, and then analyzed by FCM. Using a 5-h pre-enrichment period, the method could detect low numbers of S. aureus cells in 6 h, with a limit of detection of 7.50 cells/mL in milk and 8.30 cells/g in milk powder. The established method was compared with the plate-based method using 75 ultra-high-temperature-treated milk samples, 25 pasteurized milk samples, 66 raw milk samples, and 123 milk powder samples. The two methods yielded similar results for the detection of the pathogen in all sample types. The FCM-based method allows effective and faster monitoring of S. aureus contamination and can be applied to the rapid detection of microorganisms in milk and dairy products.
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Affiliation(s)
- Siyuan Liu
- Center for Advanced Measurement Science, National Institute of Metrology, Beijing, China
| | - Bin Wang
- Center for Advanced Measurement Science, National Institute of Metrology, Beijing, China
| | - Zhiwei Sui
- Center for Advanced Measurement Science, National Institute of Metrology, Beijing, China
| | - Ziquan Wang
- Center for Advanced Measurement Science, National Institute of Metrology, Beijing, China
| | - Longquan Li
- Center for Advanced Measurement Science, National Institute of Metrology, Beijing, China.,School of Biological and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan, China
| | - Xiaoxiao Zhen
- Institute of Chemical Analysis and Biomedicine, Beijing Institute of Metrology, Beijing, China
| | - Wei Zhao
- Department of Supervision, Nantong Customs, Nantong, China
| | - Guoping Zhou
- School of Biological and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan, China
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Zhao Y, Bu S, Wang C, Ma C, Li Z, Zhang W, Wan J. Dual Aptamer-Copper (II) Phosphate Nanocomposite-Based Point-of-Care Biosensor for the Determination of Escherichia coli O157:H7 through Pressure Monitoring with a Hand-Held Barometer. ANAL LETT 2020. [DOI: 10.1080/00032719.2020.1817059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Yinghao Zhao
- Laboratory of Pathogenic Microbiology and Immunology, College of Life Science, Jilin Agricultural University, Changchun, China
- Institute of Military Veterinary, Academy of Military Medical Sciences, Changchun, China
| | - Shengjun Bu
- Institute of Military Veterinary, Academy of Military Medical Sciences, Changchun, China
| | - Chengyu Wang
- Institute of Military Veterinary, Academy of Military Medical Sciences, Changchun, China
| | - Chengyou Ma
- College of Geo-Exploration Science and Technology, Jilin University, Changchun, China
| | - Zhongyi Li
- Institute of Military Veterinary, Academy of Military Medical Sciences, Changchun, China
| | - Wenhui Zhang
- Laboratory of Pathogenic Microbiology and Immunology, College of Life Science, Jilin Agricultural University, Changchun, China
| | - Jiayu Wan
- Institute of Military Veterinary, Academy of Military Medical Sciences, Changchun, China
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Ye Y, Zheng L, Wu T, Ding X, Chen F, Yuan Y, Fan GC, Shen Y. Size-Dependent Modulation of Polydopamine Nanospheres on Smart Nanoprobes for Detection of Pathogenic Bacteria at Single-Cell Level and Imaging-Guided Photothermal Bactericidal Activity. ACS APPLIED MATERIALS & INTERFACES 2020; 12:35626-35637. [PMID: 32657116 DOI: 10.1021/acsami.0c07784] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Pathogenic bacterial fouling in agriculture and food-associated products poses mounting food safety concerns today. Efficient integration of precise tracking and on-demand bacterial killing to achieve the source control of pathogenic bacteria at the single-cell level is one of the most valuable antifouling methods for safeguarding food safety but remains unexplored. Here, we report an all-in-one design strategy as a proof of concept to establish a stimuli-responsive nanoprobe PDANSs-FAM-Apt for the detection of Staphylococcus aureus (S. aureus) at the single-cell level, which could be capable of guiding the on-demand photothermal killing of bacteria upon near-infrared (NIR) light irradiation. By examining the size-dependent modulation of the fluorescence resonance energy transfer efficiency to polydopamine nanospheres (PDANSs), PDANSs-FAM-Apt was finally assembled by 6-carboxyfluorescein-terminated S. aureus, binding the aptamer (FAM-Apt) and PDANSs at ∼258 nm through π-π stacking interactions. As a result, PDANSs-FAM-Apt exhibits a remarkable fluorescence enhancement (∼261-fold) to S. aureus with a satisfactory detection limit of 1.0 cfu/mL, allowing for assay at the single-cell level and thus ultralow background fluorescence imaging of S. aureus as well as its biofilms. Moreover, PDANSs-FAM-Apt shows a high photothermal bactericidal property upon NIR light irradiation, endowing it with the strong capacity to efficiently produce heat for destroying S. aureus and its biofilms with the guidance of imaging results. This work emphasizes the versatility of using the combination of stimuli-responsive fluorescence imaging dependent on the PDANS size modulation and NIR light-activated photothermal antibacterial activity to design stimuli-responsive nanoprobes with an improved precision for pathogenic bacteria monitoring and source controlling, which opens a promising antifouling avenue to eliminate bacteria and disrupt bacterial biofilms in agriculture and food-related industries.
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Affiliation(s)
- Yingwang Ye
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
| | - Libing Zheng
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
| | - Tingting Wu
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
| | - Xiaowei Ding
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
| | - Feng Chen
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
| | - Yiying Yuan
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
| | - Gao-Chao Fan
- Key Laboratory of Optic-electric Sensing and Analytical Chemistry for Life Science, Ministry of Education, Shandong Key Laboratory of Biochemical Analysis, Qingdao University of Science and Technology, Qingdao 266042, China
| | - Yizhong Shen
- Engineering Research Center of Bio-Process, Ministry of Education, School of Food & Biological Engineering, Hefei University of Technology, Hefei 230009, China
- State Key Laboratory of Analytical Chemistry for Life Sciences, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China
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