1
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Synthesis of γ-lactams via Ru(II)–Pheox-catalyzed regioselective intramolecular Csp3–H insertion of diazoacetamides. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.152276] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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2
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Martínez-Campos Z, Pastor N, Pineda-Urbina K, Gómez-Sandoval Z, Fernández-Zertuche M, Razo-Hernández RS. In silico structure-based design of GABA B receptor agonists using a combination of docking and QSAR. Chem Biol Drug Des 2019; 94:1782-1798. [PMID: 31207116 DOI: 10.1111/cbdd.13580] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 05/29/2019] [Accepted: 06/02/2019] [Indexed: 12/27/2022]
Abstract
The study of γ-aminobutyric acid B receptor (GABAB ) activation is of great interest for several brain disorders. The search of new GABAB receptor agonists has been carried out by many research groups. As a result, Baclofen has become the prototypical GABAB receptor agonist. However, several attempts have been made to modify its structure to generate derivatives with improved activity. In this work, we carried out a theoretical and computational study for a wide range of GABAB receptor agonists reported in the literature. Molecular docking and QSAR techniques were combined by using the interaction energies of the agonists with the key residues of GABAB receptor, as molecular descriptors for the QSAR construction. The resulting mathematical model suggests that the activity of GABAB receptor agonists is influenced by three factors: their shape and molecular size (PW5 and PJI2), their constitutional features (ELUMO and T(N…O)) and the energy interaction with GABAB receptor (ETRP278 ). This model was validated by the QUIK, REDUNDANCY and OVERFITTING rules, and its predicted ability was tasted by the QLOO , QASYM , R 0 2 and r m 2 rules. Finally, six new compounds are proposed (35-40) with high potential to be used as GABAB receptor agonists.
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Affiliation(s)
- Zuleyma Martínez-Campos
- Instituto de Investigación en Ciencias Básicas y Aplicadas, Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos, México
| | - Nina Pastor
- Instituto de Investigación en Ciencias Básicas y Aplicadas, Centro de Investigación en Dinámica Celular, Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos, México
| | | | | | - Mario Fernández-Zertuche
- Instituto de Investigación en Ciencias Básicas y Aplicadas, Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos, México
| | - Rodrigo Said Razo-Hernández
- Instituto de Investigación en Ciencias Básicas y Aplicadas, Centro de Investigación en Dinámica Celular, Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos, México
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3
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Faderl C, Budde S, Kachkovskyi G, Rackl D, Reiser O. Visible Light-Mediated Decarboxylation Rearrangement Cascade of ω-Aryl-N-(acyloxy)phthalimides. J Org Chem 2018; 83:12192-12206. [DOI: 10.1021/acs.joc.8b01538] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Christian Faderl
- Institut für Organische Chemie, Universität Regensburg, Universitätsstrasse 31, 93053 Regensburg, Germany
| | - Simon Budde
- Institut für Organische Chemie, Universität Regensburg, Universitätsstrasse 31, 93053 Regensburg, Germany
| | - Georgiy Kachkovskyi
- Institut für Organische Chemie, Universität Regensburg, Universitätsstrasse 31, 93053 Regensburg, Germany
| | - Daniel Rackl
- Institut für Organische Chemie, Universität Regensburg, Universitätsstrasse 31, 93053 Regensburg, Germany
| | - Oliver Reiser
- Institut für Organische Chemie, Universität Regensburg, Universitätsstrasse 31, 93053 Regensburg, Germany
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4
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Laqua K, Klemm M, Richard-Greenblatt M, Richter A, Liebe L, Huang T, Lin S, Guardia A, Pérez-Herran E, Ballell L, Av-Gay Y, Imming P. Synthesis, antimycobacterial activity and influence on mycobacterial InhA and PknB of 12-membered cyclodepsipeptides. Bioorg Med Chem 2018; 26:3166-3190. [PMID: 29706526 DOI: 10.1016/j.bmc.2018.04.045] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2018] [Revised: 04/16/2018] [Accepted: 04/20/2018] [Indexed: 11/26/2022]
Abstract
In recent years, several small natural cyclopeptides and cyclodepsipeptides were reported to have antimycobacterial activity. Following this lead, a synthetic pathway was developed for a small series of 12-membered ring compounds with one amide and two ester bonds (cyclotridepsipeptides). Within the series, the ring system proved to be necessary for growth inhibition of Mycobacterium smegmatis and Mycobacterium tuberculosis in the low micromolar range. Open-chain precursors and analogues were inactive. The compounds modulated autophosphorylation of the mycobacterial protein kinase B (PknB). PknB inhibitors were active at µM concentration against mycobacteria while inducers were inactive. PknB regulates the activity of the mycobacterial reductase InhA, the target of isoniazid. The activity of the series against Mycobacterium bovis BCG InhA overexpressing strains was indistinguishable from that of the parental strain suggesting that they do not inhibit InhA. All substances were not cytotoxic (HeLa > 5 µg/ml) and did not show any significant antiproliferative effect (HUVEC > 5 µg/ml; K-562 > 5 µg/ml). Within the scope of this study, the molecular target of this new type of small cyclodepsipeptide was not identified, but the data suggest interaction with PknB or other kinases may partly cause the activity.
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Affiliation(s)
- Katja Laqua
- Institut für Pharmazie, Martin-Luther-Universität Halle-Wittenberg, Wolfgang-Langenbeck-Str. 4, 06120 Halle, Germany
| | - Marcel Klemm
- Institut für Pharmazie, Martin-Luther-Universität Halle-Wittenberg, Wolfgang-Langenbeck-Str. 4, 06120 Halle, Germany
| | - Melissa Richard-Greenblatt
- Division of Infectious Diseases, Department of Medicine, University of British Columbia, Vancouver, British Columbia V6H 3Z6, Canada
| | - Adrian Richter
- Institut für Pharmazie, Martin-Luther-Universität Halle-Wittenberg, Wolfgang-Langenbeck-Str. 4, 06120 Halle, Germany
| | - Linda Liebe
- Institut für Pharmazie, Martin-Luther-Universität Halle-Wittenberg, Wolfgang-Langenbeck-Str. 4, 06120 Halle, Germany
| | - Tingting Huang
- State Key Laboratory of Microbial Metabolism, Joint International Laboratory on Metabolic & Developmental Sciences, School of Life Sciences & Biotechnology, Shanghai Jiao Tong University, Shanghai 200030, PR China
| | - Shuangjun Lin
- State Key Laboratory of Microbial Metabolism, Joint International Laboratory on Metabolic & Developmental Sciences, School of Life Sciences & Biotechnology, Shanghai Jiao Tong University, Shanghai 200030, PR China
| | - Ana Guardia
- Diseases of the Developing World, Alternative Discovery & Development, GlaxoSmithKline, Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain
| | - Esther Pérez-Herran
- Diseases of the Developing World, Alternative Discovery & Development, GlaxoSmithKline, Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain
| | - Lluís Ballell
- Diseases of the Developing World, Alternative Discovery & Development, GlaxoSmithKline, Severo Ochoa 2, 28760 Tres Cantos, Madrid, Spain
| | - Yossef Av-Gay
- Division of Infectious Diseases, Department of Medicine, University of British Columbia, Vancouver, British Columbia V6H 3Z6, Canada
| | - Peter Imming
- Institut für Pharmazie, Martin-Luther-Universität Halle-Wittenberg, Wolfgang-Langenbeck-Str. 4, 06120 Halle, Germany.
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5
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Improved Buchner reaction selectivity in the copper-catalyzed reactions of ethyl 3-arylmethylamino-2-diazo-3-oxopropanoates. Tetrahedron 2017. [DOI: 10.1016/j.tet.2017.06.029] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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6
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Ring A, Ford A, Maguire AR. Substrate and catalyst effects in C–H insertion reactions of α-diazoacetamides. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2016.10.081] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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Katuri JVP, Ekkundi VS, Nagarajan K. A Simple and Expedient Procedure for the Preparation of Gabapentin Lactam (2-Aza-spiro[4,5]decan-3-one). Org Process Res Dev 2016. [DOI: 10.1021/acs.oprd.6b00246] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jashuva V. P. Katuri
- Hikal Ltd., 3A, International Biotech
Park, Hinjewadi, Pune 411057, Maharashtra, India
- Department
of Natural Product Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, Telangana, India
| | - Vadiraj S. Ekkundi
- Hikal Ltd., 3A, International Biotech
Park, Hinjewadi, Pune 411057, Maharashtra, India
| | - Kuppuswamy Nagarajan
- Hikal Ltd., Third Floor,
Grey Rock, No. 10, 24th Main, J. P.
Nagar Second Phase, Bangalore 560078, Karnataka, India
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8
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Gianatassio R, Lopchuk JM, Wang J, Pan CM, Malins LR, Prieto L, Brandt TA, Collins MR, Gallego GM, Sach NW, Spangler JE, Zhu H, Zhu J, Baran PS. Organic chemistry. Strain-release amination. Science 2016; 351:241-6. [PMID: 26816372 DOI: 10.1126/science.aad6252] [Citation(s) in RCA: 286] [Impact Index Per Article: 35.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
To optimize drug candidates, modern medicinal chemists are increasingly turning to an unconventional structural motif: small, strained ring systems. However, the difficulty of introducing substituents such as bicyclo[1.1.1]pentanes, azetidines, or cyclobutanes often outweighs the challenge of synthesizing the parent scaffold itself. Thus, there is an urgent need for general methods to rapidly and directly append such groups onto core scaffolds. Here we report a general strategy to harness the embedded potential energy of effectively spring-loaded C-C and C-N bonds with the most oft-encountered nucleophiles in pharmaceutical chemistry, amines. Strain-release amination can diversify a range of substrates with a multitude of desirable bioisosteres at both the early and late stages of a synthesis. The technique has also been applied to peptide labeling and bioconjugation.
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Affiliation(s)
- Ryan Gianatassio
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Justin M Lopchuk
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Jie Wang
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Chung-Mao Pan
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Lara R Malins
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Liher Prieto
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA
| | - Thomas A Brandt
- Chemical Research and Development, Pfizer Worldwide Research and Development, Eastern Point Road, Groton, CT 06340, USA
| | - Michael R Collins
- Department of Chemistry, La Jolla Laboratories, Pfizer Inc., 10770 Science Center Drive, San Diego, CA 92121, USA
| | - Gary M Gallego
- Department of Chemistry, La Jolla Laboratories, Pfizer Inc., 10770 Science Center Drive, San Diego, CA 92121, USA
| | - Neal W Sach
- Department of Chemistry, La Jolla Laboratories, Pfizer Inc., 10770 Science Center Drive, San Diego, CA 92121, USA
| | - Jillian E Spangler
- Department of Chemistry, La Jolla Laboratories, Pfizer Inc., 10770 Science Center Drive, San Diego, CA 92121, USA
| | - Huichin Zhu
- Department of Chemistry, La Jolla Laboratories, Pfizer Inc., 10770 Science Center Drive, San Diego, CA 92121, USA
| | - Jinjiang Zhu
- Department of Chemistry, La Jolla Laboratories, Pfizer Inc., 10770 Science Center Drive, San Diego, CA 92121, USA
| | - Phil S Baran
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
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9
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Naciuk FF, Vargas DZ, D'Oca CRM, Moro CC, Russowsky D. One pot domino reaction accessing γ-nitroesters: synthesis of GABA derivatives. NEW J CHEM 2015. [DOI: 10.1039/c4nj01552e] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
γ-Nitroesters are synthesized by the one pot domino process. GABA derivatives phenibut and baclofen were readily accessed.
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Affiliation(s)
- Fabricio F. Naciuk
- Laboratório de Sínteses Orgânicas
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
| | - Debora Z. Vargas
- Laboratório de Sínteses Orgânicas
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
| | - Caroline R. M. D'Oca
- Laboratório de Sínteses Orgânicas
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
| | - Celso C. Moro
- Laboratório de Sólidos e Superfícies
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
| | - Dennis Russowsky
- Laboratório de Sínteses Orgânicas
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
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10
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Budny M, Nowak M, Wojtczak A, Wolan A. Synthesis ofN-(2,3,4,5,6-Pentafluorobenzyloxy)-γ-lactams by Rhodium-Catalyzed Cyclization of Diazo Amides. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402571] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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11
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Clarke LA, Ring A, Ford A, Sinha AS, Lawrence SE, Maguire AR. Enantioselective copper catalysed C–H insertion reaction of 2-sulfonyl-2-diazoacetamides to form γ-lactams. Org Biomol Chem 2014; 12:7612-28. [DOI: 10.1039/c4ob01430h] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Leyva-Pérez A, García-García P, Corma A. Multisite Organic-Inorganic Hybrid Catalysts for the Direct Sustainable Synthesis of GABAergic Drugs. Angew Chem Int Ed Engl 2014; 53:8687-90. [DOI: 10.1002/anie.201403049] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2014] [Indexed: 01/03/2023]
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13
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Leyva-Pérez A, García-García P, Corma A. Multisite Organic-Inorganic Hybrid Catalysts for the Direct Sustainable Synthesis of GABAergic Drugs. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201403049] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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14
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Mo S, Xu J. Chemospecific Intramolecular Buchner Reaction Catalyzed by Copper(II) Acetylacetonate. ChemCatChem 2014. [DOI: 10.1002/cctc.201400014] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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15
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Biswas K, Gholap R, Srinivas P, Kanyal S, Sarma KD. β-Substituted γ-butyrolactams from mucochloric acid: synthesis of (±)-baclofen and other γ-aminobutyric acids and useful building blocks. RSC Adv 2014. [DOI: 10.1039/c3ra42201a] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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16
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Stereoselective synthesis of (S)-oxiracetam and (S)-GABOB from (R)-glyceraldehyde acetonide. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.03.035] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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17
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Candeias NR, Carias C, Gomes LFR, André V, Duarte MT, Gois PMP, Afonso CAM. Asymmetric Intramolecular CH Insertion of α-Diazoacetamides in Water by Dirhodium(II) Catalysts Derived from Natural Amino Acids. Adv Synth Catal 2012. [DOI: 10.1002/adsc.201200101] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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18
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Yoshida M, Masaki E, Ikehara H, Hara S. Enantioselective synthesis of gabapentin analogues via organocatalytic asymmetric Michael addition of α-branched aldehydes to β-nitroacrylates. Org Biomol Chem 2012; 10:5289-97. [DOI: 10.1039/c2ob25413a] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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19
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Hansen JH, Gregg TM, Ovalles SR, Lian Y, Autschbach J, Davies HML. On the Mechanism and Selectivity of the Combined C−H Activation/Cope Rearrangement. J Am Chem Soc 2011; 133:5076-85. [DOI: 10.1021/ja111408v] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jørn H. Hansen
- Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, Georgia 30322, United States
| | - Timothy M. Gregg
- Department of Chemistry and Biochemistry, Canisius College, Buffalo, New York 14208, United States
| | - Stephanie R. Ovalles
- Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, Georgia 30322, United States
| | - Yajing Lian
- Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, Georgia 30322, United States
| | - Jochen Autschbach
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
| | - Huw M. L. Davies
- Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, Georgia 30322, United States
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20
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5-(4-Chlorophenyl)-5,6-dihydro-1,3-oxazepin-7(4H)-one derivatives as lipophilic cyclic analogues of baclofen: Design, synthesis, and neuropharmacological evaluation. Bioorg Med Chem 2008; 16:7983-91. [DOI: 10.1016/j.bmc.2008.07.064] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2008] [Revised: 07/22/2008] [Accepted: 07/23/2008] [Indexed: 11/23/2022]
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21
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22
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23
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Grohmann M, Maas G. Ruthenium catalysts for carbenoid intramolecular C–H insertion of 2-diazoacetoacetamides and diazomalonic ester amides. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.09.053] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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24
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Köhler F, Gais HJ, Raabe G. Asymmetric Synthesis of Highly Substituted γ-Amino Acids from Allyltitanium Sulfoximines. Org Lett 2007; 9:1231-4. [PMID: 17326643 DOI: 10.1021/ol063082q] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
[structure: see text]. Asymmetric syntheses of the highly substituted protected gamma-amino acids 10a, 10b, 18, and 21 have been developed starting from the allyltitanium sulfoximines V and VI, respectively, and furan-2-carbaldehyde.
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Affiliation(s)
- Franz Köhler
- Institut für Organische Chemie der Rheinisch-Westfälischen Technischen Hochschule Aachen, Landoltweg 1, D-52056 Aachen, Germany
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Grohmann M, Buck S, Schäffler L, Maas G. Diruthenium(I,I) Catalysts for the Formation of β- and γ-Lactamsvia Carbenoid CH Insertion of α-Diazoacetamides. Adv Synth Catal 2006. [DOI: 10.1002/adsc.200606108] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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