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Sahoo S, Ghosh P, Khan MEH, De P. Recent Progress in Macromolecular Design and Synthesis of Bile Acid‐Based Polymeric Architectures. MACROMOL CHEM PHYS 2021. [DOI: 10.1002/macp.202100414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Subhasish Sahoo
- Polymer Research Centre and Centre for Advanced Functional Materials Department of Chemical Sciences Indian Institute of Science Education and Research Kolkata Nadia West Bengal Mohanpur, 741246 India
| | - Pooja Ghosh
- Polymer Research Centre and Centre for Advanced Functional Materials Department of Chemical Sciences Indian Institute of Science Education and Research Kolkata Nadia West Bengal Mohanpur, 741246 India
| | - Md Ezaz Hasan Khan
- School of General Education College of the North Atlantic ‐ Qatar Arab League Street Doha 24449 Qatar
| | - Priyadarsi De
- Polymer Research Centre and Centre for Advanced Functional Materials Department of Chemical Sciences Indian Institute of Science Education and Research Kolkata Nadia West Bengal Mohanpur, 741246 India
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Basak D, Saha P, Madhavan N. Basic Design Elements for Tunable Cation Transport Using Picolinic-Acid-Incorporated Tetrapeptides. ChemistrySelect 2018. [DOI: 10.1002/slct.201801612] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Debajyoti Basak
- Department of Chemistry; Indian Institute of Technology Madras; Chennai 600036 India
| | - Parichita Saha
- Department of Chemistry; Indian Institute of Technology Bombay, Powai; Mumbai 400076, Maharastra India
| | - Nandita Madhavan
- Department of Chemistry; Indian Institute of Technology Bombay, Powai; Mumbai 400076, Maharastra India
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D'yakonov VA, Tuktarova RA, Islamov II, Khalilov LM, Dzhemilev UM. Catalytic cyclometallation in steroid chemistry IV: Efficient method for the synthesis of tetrahydrothiophene, tetrahydroselenophen and cyclopentanone derivatives of (5α)-cholestane. Steroids 2016; 108:77-84. [PMID: 26827630 DOI: 10.1016/j.steroids.2016.01.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/16/2015] [Revised: 12/18/2015] [Accepted: 01/26/2016] [Indexed: 01/20/2023]
Abstract
Catalytic cycloalumination of (3β,5α)-3-vinylcholestane and (3α,5α)-3-allylcholestane with Et3Al catalyzed by Cp2ZrCl2 was performed for the first time to give previously unknown aluminacyclopentanes in ∼90% yield; these products were converted in situ to carbo- and heterocyclic (5α)-cholestane derivatives.
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Affiliation(s)
- Vladimir A D'yakonov
- Institute of Petrochemistry and Catalysis, Russian Academy of Sciences, pr. Oktyabrya 141, 450075 Ufa, Russian Federation.
| | - Regina A Tuktarova
- Institute of Petrochemistry and Catalysis, Russian Academy of Sciences, pr. Oktyabrya 141, 450075 Ufa, Russian Federation
| | - Ilgiz I Islamov
- Institute of Petrochemistry and Catalysis, Russian Academy of Sciences, pr. Oktyabrya 141, 450075 Ufa, Russian Federation
| | - Leonard M Khalilov
- Institute of Petrochemistry and Catalysis, Russian Academy of Sciences, pr. Oktyabrya 141, 450075 Ufa, Russian Federation
| | - Usein M Dzhemilev
- Institute of Petrochemistry and Catalysis, Russian Academy of Sciences, pr. Oktyabrya 141, 450075 Ufa, Russian Federation
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D'yakonov VA, Dzhemileva LU, Tuktarova RA, Makarov AA, Islamov II, Mulyukova AR, Dzhemilev UM. Catalytic cyclometallation in steroid chemistry III: Synthesis of steroidal derivatives of 5Z,9Z-dienoic acid and investigation of its human topoisomerase I inhibitory activity. Steroids 2015; 102:110-7. [PMID: 26276106 DOI: 10.1016/j.steroids.2015.08.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Revised: 08/03/2015] [Accepted: 08/08/2015] [Indexed: 11/20/2022]
Abstract
Two approaches to stereoselective synthesis of steroid 5Z,9Z-dienoic acids were developed, the first one being based on the cross-cyclomagnesiation of 2-(hepta-5,6-dien-1-yloxy)tetrahydro-2H-pyran and 1,2-diene cholesterol derivatives on treatment with EtMgBr catalyzed by Cp2TiCl2, while the other involving the synthesis of esters of hydroxy steroids with (5Z,9Z)-tetradeca-5,9-dienedioic acid, prepared in two steps using homo-cyclomagnesiation of 2-(hepta-5,6-dien-1-yloxy)tetrahydro-2H-pyran as the key step. High inhibitory activity of the synthesized acids against human topoisomerase I (hTop1) was found.
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Affiliation(s)
- Vladimir A D'yakonov
- Institute of Petrochemistry and Catalysis, Russian Academy of Science, 141 Prospekt Oktyabrya, 450075 Ufa, Russian Federation.
| | - Lilya U Dzhemileva
- Department of Immunology and Human Reproductive Health, Bashkir State Medical University, 3 Lenin Street, Ufa, Bashkortostan 450003, Russian Federation.
| | - Regina A Tuktarova
- Institute of Petrochemistry and Catalysis, Russian Academy of Science, 141 Prospekt Oktyabrya, 450075 Ufa, Russian Federation
| | - Aleksey A Makarov
- Institute of Petrochemistry and Catalysis, Russian Academy of Science, 141 Prospekt Oktyabrya, 450075 Ufa, Russian Federation
| | - Ilgiz I Islamov
- Institute of Petrochemistry and Catalysis, Russian Academy of Science, 141 Prospekt Oktyabrya, 450075 Ufa, Russian Federation
| | - Alfiya R Mulyukova
- Institute of Petrochemistry and Catalysis, Russian Academy of Science, 141 Prospekt Oktyabrya, 450075 Ufa, Russian Federation
| | - Usein M Dzhemilev
- Institute of Petrochemistry and Catalysis, Russian Academy of Science, 141 Prospekt Oktyabrya, 450075 Ufa, Russian Federation
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De Riccardis F, Izzo I, Montesarchio D, Tecilla P. Ion transport through lipid bilayers by synthetic ionophores: modulation of activity and selectivity. Acc Chem Res 2013; 46:2781-90. [PMID: 23534613 DOI: 10.1021/ar4000136] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The ion-coupled processes that occur in the plasma membrane regulate the cell machineries in all the living organisms. The details of the chemical events that allow ion transport in biological systems remain elusive. However, investigations of the structure and function of natural and artificial transporters has led to increasing insights about the conductance mechanisms. Since the publication of the first successful artificial system by Tabushi and co-workers in 1982, synthetic chemists have designed and constructed a variety of chemically diverse and effective low molecular weight ionophores. Despite their relative structural simplicity, ionophores must satisfy several requirements. They must partition in the membrane, interact specifically with ions, shield them from the hydrocarbon core of the phospholipid bilayer, and transport ions from one side of the membrane to the other. All these attributes require amphipathic molecules in which the polar donor set used for ion recognition (usually oxygens for cations and hydrogen bond donors for anions) is arranged on a lipophilic organic scaffold. Playing with these two structural motifs, donor atoms and scaffolds, researchers have constructed a variety of different ionophores, and we describe a subset of interesting examples in this Account. Despite the ample structural diversity, structure/activity relationships studies reveal common features. Even when they include different hydrophilic moieties (oxyethylene chains, free hydroxyl, etc.) and scaffolds (steroid derivatives, neutral or polar macrocycles, etc.), amphipathic molecules, that cannot span the entire phospholipid bilayer, generate defects in the contact zone between the ionophore and the lipids and increase the permeability in the bulk membrane. Therefore, topologically complex structures that span the entire membrane are needed to elicit channel-like and ion selective behaviors. In particular the alternate-calix[4]arene macrocycle proved to be a versatile platform to obtain 3D-structures that can form unimolecular channels in membranes. In these systems, the selection of proper donor groups allows us to control the ion selectivity of the process. We can switch from cation to anion transport by substituting protonated amines for the oxygen donors. Large and stable tubular structures with nanometric sized transmembrane nanopores that provide ample internal space represent a different approach for the preparation of synthetic ion channels. We used the metal-mediated self-assembly of porphyrin ligands with Re(I) corners as a new method for producing to robust channel-like structures. Such structures can survive in the complex membrane environment and show interesting ionophoric behavior. In addition to the development of new design principles, the selective modification of the biological membrane permeability could lead to important developments in medicine and technology.
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Affiliation(s)
- Francesco De Riccardis
- Department of Chemistry and Biology, University of Salerno, via Ponte don Melillo, I-84084 Fisciano (SA), Italy
| | - Irene Izzo
- Department of Chemistry and Biology, University of Salerno, via Ponte don Melillo, I-84084 Fisciano (SA), Italy
| | - Daniela Montesarchio
- Department of Chemical Sciences, University Federico II of Napoli, Via Cintia, 4, I-80126 Napoli, Italy
| | - Paolo Tecilla
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, via Giorgieri 1, I-34127, Trieste, Italy
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Meijide F, Trillo JV, de Frutos S, Galantini L, Pavel NV, Soto VH, Jover A, Tato JV. Crystal structure of head-to-head dimers of cholic and deoxycholic acid derivatives with different symmetric bridges. Steroids 2013. [PMID: 23200733 DOI: 10.1016/j.steroids.2012.11.010] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
The crystal structure of three head-to-head dimers (having two cholic acid or deoxycholic acid units) linked at carbon atoms C3 by aromatic or alkyl bridges is studied. An internal coordinates system is necessary for describing the relative orientation in the space of the two bile acid residues. Five angles (three torsion and two common ones) are necessary for defining the relative position of both steroid residues in space. Carbon atoms C3 (which always carries a α-hydroxy group in natural bile acids), and C10 and C13 (which always carry β-methyl groups) of each steroid residue are suitable for this purpose. Furthermore, the distance between each C3 carbon atoms of both steroid residues will allow one to locate the steroids in space. The three dimers selected provide a large range of values for these angles. The packing, hydrogen bond network, and location of guest in the three crystals are discussed.
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Affiliation(s)
- Francisco Meijide
- Departamento de Química Física, Facultad de Ciencias, Universidad de Santiago de Compostela, Avda. Alfonso X El Sabio s/n, 27002 Lugo, Spain
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Abstract
It is 25 years since the first report of a synthetic ion channel transporter. Today, dozens of molecular and supramolecular designs have been developed to facilitate ion and small molecule transport across a bilayer membrane. Presented here is a concise summary of the advances made over the past four years. The transporters are grouped into three mechanistic classes: mobile carrier, monomeric channel, and self-assembled pore. Common building blocks are crown ethers, steroids, cyclodextrins, peptides, curcubiturils, and calixarenes. The eventual goal is to produce functional supramolecular devices such as sensors, enzyme assays, and lead candidates for pharmaceutical development.
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Affiliation(s)
- Beth A McNally
- Department of Chemistry and Biochemistry, University of Notre Dame, 251 Nieuwland Science Hall, Notre Dame, IN 46556, USA
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On the importance of the pore inner cavity for the ionophoric activity of 1,3-alternate calix[4]arene/steroid conjugates. Tetrahedron 2006. [DOI: 10.1016/j.tet.2006.04.028] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Abstract
This critical review covers synthetic ion channels and pores created between January 2004 and December 2005 comprehensively. The discussion of a rich collection of structural motifs may particularly appeal to organic, biological, supramolecular and polymer chemists. Functions addressed include ion selectivity and molecular recognition, as well as responsiveness to light, heat, voltage and membrane composition. The practical applications involved concern certain topics in medicinal chemistry (antibiotics, drug delivery), catalysis and sensing. An introduction to principles and methods is provided for the non-specialist; some new sources of inspiration from fields beyond chemistry are highlighted.
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Affiliation(s)
- Adam L Sisson
- Department of Organic Chemistry, University of Geneva, Geneva, Switzerland
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