1
|
Schmidt B. The Role of Total Synthesis in Structure Revision and Elucidation of Decanolides (Nonanolides). PROGRESS IN THE CHEMISTRY OF ORGANIC NATURAL PRODUCTS 2021; 115:1-57. [PMID: 33797640 DOI: 10.1007/978-3-030-64853-4_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Ten-membered lactones are commonly observed structures of natural products. They are mostly fungal metabolites, which often act as plant pathogens, but recently ten-membered lactones were identified as pheromones of frogs and termites. Although modern spectroscopic methods are nowadays routinely used to elucidate the structure of natural products, structural assignments of ten-membered lactones often remain incomplete or are surprisingly often erroneous. Most errors concern the absolute configuration. The examples discussed in this chapter demonstrate that enantioselective total synthesis is not only an efficient tool for corroborating or revising a proposed structure, but that the synthesis of different stereoisomers as references for gas chromatographic investigations can be a vital part of the structure elucidation process if only minute amounts of material are available. As a method of outstanding importance for the synthesis of ten-membered lactones olefin metathesis has emerged. Most of the examples discussed herein use one or more olefin metathesis reactions as key steps.
Collapse
Affiliation(s)
- Bernd Schmidt
- Institut für Chemie, Universität Potsdam, Karl-Liebknecht-Strasse 24-25, 14476, Potsdam-Golm, Germany.
| |
Collapse
|
2
|
Plž M, Petrovičová T, Rebroš M. Semi-Continuous Flow Biocatalysis with Affinity Co-Immobilized Ketoreductase and Glucose Dehydrogenase. Molecules 2020; 25:molecules25184278. [PMID: 32961948 PMCID: PMC7570937 DOI: 10.3390/molecules25184278] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Revised: 09/10/2020] [Accepted: 09/16/2020] [Indexed: 12/13/2022] Open
Abstract
The co-immobilization of ketoreductase (KRED) and glucose dehydrogenase (GDH) on highly cross-linked agarose (sepharose) was studied. Immobilization of these two enzymes was performed via affinity interaction between His-tagged enzymes (six histidine residues on the N-terminus of the protein) and agarose matrix charged with nickel (Ni2+ ions). Immobilized enzymes were applied in a semicontinuous flow reactor to convert the model substrate; α-hydroxy ketone. A series of biotransformation reactions with a substrate conversion of >95% were performed. Immobilization reduced the requirement for cofactor (NADP+) and allowed the use of higher substrate concentration in comparison with free enzymes. The immobilized system was also tested on bulky ketones and a significant enhancement in comparison with free enzymes was achieved.
Collapse
|
3
|
Meng Z, Souillart L, Monks B, Huwyler N, Herrmann J, Müller R, Fürstner A. A “Motif-Oriented” Total Synthesis of Nannocystin Ax. Preparation and Biological Assessment of Analogues. J Org Chem 2017; 83:6977-6994. [DOI: 10.1021/acs.joc.7b02871] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zhanchao Meng
- Max-Planck-Institut für Kohlenforschung, D-45470 Mülheim/Ruhr, Germany
| | | | - Brendan Monks
- Max-Planck-Institut für Kohlenforschung, D-45470 Mülheim/Ruhr, Germany
| | - Nikolas Huwyler
- Max-Planck-Institut für Kohlenforschung, D-45470 Mülheim/Ruhr, Germany
| | - Jennifer Herrmann
- Helmholtz Institute for Pharmaceutical Research Saarland, Saarland University, 66123 Saarbrücken, Germany
| | - Rolf Müller
- Helmholtz Institute for Pharmaceutical Research Saarland, Saarland University, 66123 Saarbrücken, Germany
| | - Alois Fürstner
- Max-Planck-Institut für Kohlenforschung, D-45470 Mülheim/Ruhr, Germany
| |
Collapse
|
4
|
Gil A, Albericio F, Álvarez M. Role of the Nozaki–Hiyama–Takai–Kishi Reaction in the Synthesis of Natural Products. Chem Rev 2017. [DOI: 10.1021/acs.chemrev.7b00144] [Citation(s) in RCA: 99] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Alejandro Gil
- ChemBio Lab, Barcelona Science Park, Baldiri Reixac 10, E-08028 Barcelona, Spain
- CIBER-BBN,
Networking
Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, Baldiri Reixac 10, 08028 Barcelona, Spain
| | - Fernando Albericio
- ChemBio Lab, Barcelona Science Park, Baldiri Reixac 10, E-08028 Barcelona, Spain
- CIBER-BBN,
Networking
Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, Baldiri Reixac 10, 08028 Barcelona, Spain
- University of Kwa-Zulu-Natal, 4001, Durban, South Africa
| | - Mercedes Álvarez
- ChemBio Lab, Barcelona Science Park, Baldiri Reixac 10, E-08028 Barcelona, Spain
- CIBER-BBN,
Networking
Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, Baldiri Reixac 10, 08028 Barcelona, Spain
| |
Collapse
|
5
|
|
6
|
Asymmetric synthesis of duloxetine intermediate (S)-(-)-3-N-methylamino-1-(2-thienyl)-1-propanol using immobilized Saccharomyces cerevisiae in liquid-core sodium alginate/chitosan/sodium alginate microcapsules. Bioprocess Biosyst Eng 2014; 37:2243-50. [DOI: 10.1007/s00449-014-1202-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2014] [Accepted: 04/19/2014] [Indexed: 10/25/2022]
|
7
|
Tokoshima D, Hanaya K, Shoji M, Sugai T. Whole-cell yeast-mediated preparation of (R)-2-chloro-1-(3-nitrophenyl)ethanol as a synthetic precursor for (R)-phenylephrine. ACTA ACUST UNITED AC 2013. [DOI: 10.1016/j.molcatb.2013.07.021] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
8
|
Furuta M, Hanaya K, Shoji M, Sugai T. Towards the Integrated Exploitation of Microbial and Enzymatic Catalysis ^|^mdash; Importance of Substrate Molecular Technology and Quest of Biocatalysts, for Designing Synthetic Plans. J SYN ORG CHEM JPN 2013. [DOI: 10.5059/yukigoseikyokaishi.71.237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
|
9
|
Singh A, Chisti Y, Banerjee U. Stereoselective biocatalytic hydride transfer to substituted acetophenones by the yeast Metschnikowia koreensis. Process Biochem 2012. [DOI: 10.1016/j.procbio.2012.09.022] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|
10
|
Lu S, Sun P, Li T, Kurtán T, Mándi A, Antus S, Krohn K, Draeger S, Schulz B, Yi Y, Li L, Zhang W. Bioactive nonanolide derivatives isolated from the endophytic fungus Cytospora sp. J Org Chem 2011; 76:9699-710. [PMID: 22011230 DOI: 10.1021/jo201755v] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cytospolides F-Q (6-17) and decytospolides A and B (18 and 19), 14 unusual nonanolide derivatives, were isolated from Cytospora sp., an endophytic fungus from Ilex canariensis. The structures were elucidated by means of detailed spectroscopic analysis, chemical interconversion, and X-ray single crystal diffraction. The solution- and solid-state conformers were compared by the combination of experimental methods (X-ray, NMR) supported by DFT calculations of the conformers. Absolute configurations were assigned using the modified Mosher's method and solution- and solid-state TDDFT ECD calculations. In an in vitro cytotoxicity assay toward the tumor cell lines of A549, HCT116, QGY, A375, and U973, the γ-lactone 17 demonstrated a potent growth inhibitory activity toward the cell line A-549, while nonanolide 16 with (2S) configuration showed the strongest activity against cell lines A-549, QGY, and U973. A cell cycle analysis indicated that compound 16 can significantly mediate G1 arrest in A549 tumor cells, confirming the important role of the C-2 methyl in the growth inhibition toward the tumor line. The discovery of an array of new nonanolides demonstrates the productivity of the fungus, and it is an example of chemical diversity, extending the nonanolide family by derivatives formed by ring cleavage, oxidation, esterification, and Michael addition.
Collapse
Affiliation(s)
- Shan Lu
- Research Center for Marine Drugs, and Department of Pharmacology, School of Pharmacy, Second Military Medical University, 325 Guo-He Road, Shanghai 200433, PR China
| | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
11
|
Lu S, Kurtán T, Yang G, Sun P, Mándi A, Krohn K, Draeger S, Schulz B, Yi Y, Li L, Zhang W. Cytospolides A-E, New Nonanolides from an Endophytic Fungus, Cytospora sp. European J Org Chem 2011. [DOI: 10.1002/ejoc.201100675] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
12
|
Morra NA, Pagenkopf BL. Gram Scale Synthesis of the C(18)−C(34) Fragment of Amphidinolide C. Org Lett 2011; 13:572-5. [DOI: 10.1021/ol1030074] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Nicholas A. Morra
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| | - Brian L. Pagenkopf
- Department of Chemistry, The University of Western Ontario, London, Ontario N6A 5B7, Canada
| |
Collapse
|
13
|
|
14
|
Saravanan T, Chadha A. Biocatalytic deracemization of alkyl-2-hydroxy-4-arylbut-3-ynoates using whole cells of Candida parapsilosis ATCC 7330. ACTA ACUST UNITED AC 2010. [DOI: 10.1016/j.tetasy.2010.11.021] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
15
|
Zhu W, Jiménez M, Jung WH, Camarco DP, Balachandran R, Vogt A, Day BW, Curran DP. Streamlined syntheses of (-)-dictyostatin, 16-desmethyl-25,26-dihydrodictyostatin, and 6-epi-16-desmethyl-25,26-dihydrodictyostatin. J Am Chem Soc 2010; 132:9175-87. [PMID: 20545347 DOI: 10.1021/ja103537u] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The dictyostatins are a promising class of potential anti-cancer drugs because they are powerful microtubule-stabilizing agents, but the complexity of their chemical structures is a severe impediment to their further development. On the basis of both synthetic and medicinal chemistry analyses, 16-desmethyl-25,26-dihydrodictyostatin and its C6 epimer were chosen as potentially potent yet accessible dictyostatin analogues, and three new syntheses were developed. A relatively classical synthesis involving vinyllithium addition and macrocyclization gave way to a newer and more practical approach based on esterification and ring-closing metathesis reaction. Finally, aspects of these two approaches were combined to provide a third new synthesis based on esterification and Nozaki-Hiyama-Kishi reaction. This was used to prepare the target dihydro analogues and the natural product. All of the syntheses are streamlined because of their high convergency. The work provided several new analogues of dictyostatin, including a truncated macrolactone and a C10 E-alkene, which were 400- and 50-fold less active than (-)-dictyostatin, respectively. In contrast, the targeted 16-desmethyl-25,26-dihydrodictyostatin analogues retained almost complete activity in preliminary biological assays.
Collapse
Affiliation(s)
- Wei Zhu
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA
| | | | | | | | | | | | | | | |
Collapse
|
16
|
Xiao ZJ, Zong MH, Lou WY. Highly enantioselective reduction of 4-(trimethylsilyl)-3-butyn-2-one to enantiopure (R)-4-(trimethylsilyl)-3-butyn-2-ol using a novel strain Acetobacter sp. CCTCC M209061. BIORESOURCE TECHNOLOGY 2009; 100:5560-5565. [PMID: 19564106 DOI: 10.1016/j.biortech.2009.06.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2009] [Revised: 05/31/2009] [Accepted: 06/02/2009] [Indexed: 05/28/2023]
Abstract
The biocatalytic reduction of 4-(trimethylsilyl)-3-butyn-2-one to enantiopure (R)-4-(trimethylsilyl)-3-butyn-2-ol was successfully conducted with high enantioselectivity using immobilized whole cells of a novel strain Acetobacter sp. CCTCC M209061, newly isolated from kefir. Compared with other microorganisms that were investigated, Acetobacter sp. CCTCC M209061 was shown to be more effective for the bioreduction reaction, and afforded much higher yield and product enantiomeric excess (e.e.). The optimal buffer pH, co-substrate concentration, reaction temperature, substrate concentration and shaking rate were 5.0, 130.6 mM, 30 degrees C, 6.0 mM and 180 r/min, respectively. Under the optimized conditions, the maximum yield and the product e.e. were 71% and >99%, respectively, which are much higher than those reported previously. Additionally, the established biocatalytic system proved to be efficient for the bioreduction of acetyltrimethylsilane to (R)-1-trimethylsilylethanol with excellent yield and product e.e. The immobilized cells manifested a good operational stability under the above reaction conditions since they retained 70% of their catalytic activity after ten cycles of use.
Collapse
Affiliation(s)
- Zi-Jun Xiao
- State Key Laboratory of Pulp and Paper Engineering, College of Light Industry and Food Sciences, South China University of Technology, Guangzhou 510640, China
| | | | | |
Collapse
|
17
|
Barradas S, Urbano A, Carreño M. Concise Enantioselective Synthesis of the Ten-Membered Lactone Cephalosporolide G and Its C-3 Epimer. Chemistry 2009; 15:9286-9. [DOI: 10.1002/chem.200901735] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
|
18
|
Matsuda T, Yamanaka R, Nakamura K. Recent progress in biocatalysis for asymmetric oxidation and reduction. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.tetasy.2008.12.035] [Citation(s) in RCA: 231] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
|
19
|
Abstract
An overview of marine natural products synthesis during 2007 is provided. As with earlier installments in this series, the emphasis is on total syntheses of molecules of contemporary interest, new total syntheses, and syntheses that have resulted in structure confirmation or stereochemical assignments.1 Introduction, 2 Review articles, 3 Azaspiracid, 4 Polyethers, 5 Guanidinium alkaloids, 6 Amphidinolides, 7 Total syntheses of other compounds, 8 Acknowledgements, 9 References.
Collapse
Affiliation(s)
- Jonathan C Morris
- School of Chemistry and Physics, University of Adelaide, Adelaide, Australia5005
| | | |
Collapse
|
20
|
Houng JY, Tseng JC, Hsu HF, Wu JY. Kinetic investigation on asymmetric bioreduction of ethyl 4-chloro acetoacetate catalyzed by baker’s yeast in an organic solvent-water biphasic system. KOREAN J CHEM ENG 2008. [DOI: 10.1007/s11814-008-0234-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
21
|
Hayashi Y, Samanta S, Itoh T, Ishikawa H. Asymmetric, Catalytic, and Direct Self-Aldol Reaction of Acetaldehyde Catalyzed by Diarylprolinol. Org Lett 2008; 10:5581-3. [DOI: 10.1021/ol802438u] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yujiro Hayashi
- Department of Industrial Chemistry, Faculty of Engineering, and Research Institute for Science and Technology, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Sampak Samanta
- Department of Industrial Chemistry, Faculty of Engineering, and Research Institute for Science and Technology, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Takahiko Itoh
- Department of Industrial Chemistry, Faculty of Engineering, and Research Institute for Science and Technology, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Hayato Ishikawa
- Department of Industrial Chemistry, Faculty of Engineering, and Research Institute for Science and Technology, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| |
Collapse
|
22
|
Evidente A, Cimmino A, Berestetskiy A, Andolfi A, Motta A. Stagonolides G-I and modiolide A, nonenolides produced by Stagonospora cirsii, a potential mycoherbicide for Cirsium arvense. JOURNAL OF NATURAL PRODUCTS 2008; 71:1897-1901. [PMID: 18959441 DOI: 10.1021/np800415w] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Stagonospora cirsii Davis, a fungal pathogen isolated from Cirsium arvense (commonly called Canada thistle) and proposed as a potential mycoherbicide of this perennial noxious weed, produces phytotoxic metabolites in liquid and solid cultures. Stagonolide, the main phytotoxic metabolite, and five new related nonenolides, named stagonolides B-F, were isolated from the fungus. When grown on solid culture, nonenolide yields increased. A further four nonenolides were isolated and characterized by spectroscopy. Three were new compounds and named stagonolides G-I, and the fourth was identified as modiolide A, previously isolated from Paraphaeosphaeria sp., a fungus separated from the horse mussel. Leaf disk-puncture assays at 1 mg/mL of stagonolides H-I and modiolide A were phytotoxic to C. arvense. Only stagonolide H inhibited chicory seedling root growth. The most potent toxin, stagonolide H, indicated selectivity when tested on leaves of eight different plants: Canada thistle was most sensitive to the compound.
Collapse
Affiliation(s)
- Antonio Evidente
- Dipartimento di Scienze del Suolo, della Pianta, dell'Ambiente e delle Produzioni Animali, Università di Napoli Federico II, Via Università 100, 80055 Portici, Italy.
| | | | | | | | | |
Collapse
|
23
|
Current awareness on yeast. Yeast 2008. [DOI: 10.1002/yea.1563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
|