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Farhid H, Nazeri MT, Shaabani A, Armaghan M, Janiak C. Isocyanide-based consecutive Bargellini/Ugi reactions: an efficient method for the synthesis of pseudo-peptides containing three amide bonds. Amino Acids 2020; 53:1-10. [PMID: 33247358 DOI: 10.1007/s00726-020-02917-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2019] [Accepted: 11/13/2020] [Indexed: 01/25/2023]
Abstract
Isocyanide-based consecutive Bargellini/Ugi multicomponent reactions as a combinatorial strategy have been developed for the synthesis of new class of pseudo-peptides. Via Bargellini reaction 3-carboxamido-isobutyric acids are prepared using acetone, chloroform, sodium hydroxide, and isocyanides. Then, using Ugi multicomponent reaction strategy, pseudo-peptides containing three amide bonds are synthesized using the Bargellini reaction product, aldehydes, amines, and isocyanides. This is an efficient and eco-friendly approach for easy access to wide variety of structurally diverse, drug-like pseudo-peptides from cheap and readily available precursors in high yields.
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Affiliation(s)
- Hassan Farhid
- Faculty of Chemistry, Shahid Beheshti University, G.C., P.O. Box 19396-4716, Tehran, Iran
| | - Mohammad Taghi Nazeri
- Faculty of Chemistry, Shahid Beheshti University, G.C., P.O. Box 19396-4716, Tehran, Iran
| | - Ahmad Shaabani
- Faculty of Chemistry, Shahid Beheshti University, G.C., P.O. Box 19396-4716, Tehran, Iran.
| | - Mahsa Armaghan
- Institut Für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität Düsseldorf, 40204, Düsseldorf, Germany
| | - Christoph Janiak
- Institut Für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität Düsseldorf, 40204, Düsseldorf, Germany
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2
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Abstract
As one of the most important building blocks in organic synthesis, isocyanides come in for a wide range of transformations owing mostly to their unusual terminal carbon center adsorbed electrophiles, reacted with nucleophiles, get involved in radical reactions and coordinated with metal centers. The distinctive feature of isocyanide is its ready willingness to participate in multicomponent reactions (MCRs). MCRs represent a great tool in organic synthesis for the construction of new lead structures in a single procedure introducing both structural diversity and molecular complexity in only one step. Isocyanide-based multicomponent reactions (IMCRs) have become a powerful approach for the synthesis of complex molecules providing high degree of atom and bond economy under very mild reaction conditions. The use of enantiomerically pure isocyanides can, in principle, bring about two advantages: (i) the possibility to obtain a stereochemically diverse adduct, controlling the absolute configuration of the starting isocyanide; and (ii) the possibility to induce diastereoselection in the multicomponent reaction. The most commonly-used IMCRs are the Ugi and Passerini reactions. Many published reviews have focused on the Ugi and Passerini reactions from different viewpoints, but this review describes advances in the application of chiral isocyanides in MCRs. The rationale for applying such diversity generating chemistries is also discussed.
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Affiliation(s)
- Vaezeh Fathi Vavsari
- Peptide Chemistry Research Center, K. N. Toosi University of Technology, P. O. Box 15875-4416, Tehran, Iran
| | - Pegah Shakeri
- Peptide Chemistry Research Center, K. N. Toosi University of Technology, P. O. Box 15875-4416, Tehran, Iran
| | - Saeed Balalaie
- Peptide Chemistry Research Center, K. N. Toosi University of Technology, P. O. Box 15875-4416, Tehran, Iran
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3
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Ugi–Smiles and Ullmann reactions catalyzed by Schiff base derived from Tröger’s base and BINOL. RESEARCH ON CHEMICAL INTERMEDIATES 2020. [DOI: 10.1007/s11164-020-04091-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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4
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Aguilar-Morales CM, de Loera D, Contreras-Celedón C, Cortés-García CJ, Chacón-García L. Synthesis of 1,5-disubstituted tetrazole-1,2,3 triazoles hybrids via Ugi-azide/CuAAC. SYNTHETIC COMMUN 2019. [DOI: 10.1080/00397911.2019.1616301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Cesia M. Aguilar-Morales
- Laboratorio de Diseño Molecular, Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo. Ciudad Universitaria, Morelia, Mexico
| | - Denisse de Loera
- Facultad de Ciencias Químicas, Universidad Autónoma de San Luis Potosí, San Luis Potosí, Mexico
| | - Claudia Contreras-Celedón
- Laboratorio de Diseño Molecular, Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo. Ciudad Universitaria, Morelia, Mexico
| | - Carlos J. Cortés-García
- Laboratorio de Diseño Molecular, Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo. Ciudad Universitaria, Morelia, Mexico
| | - Luis Chacón-García
- Laboratorio de Diseño Molecular, Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo. Ciudad Universitaria, Morelia, Mexico
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5
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Kutovaya IV, Zakharova EA, Shmatova OI, Nenajdenko VG. Macrocyclic Pseudopeptides Having Proline or Pipecolic Acid Residues. Efficient Synthesis via Ugi-Click Strategy. European J Org Chem 2019. [DOI: 10.1002/ejoc.201900780] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Irina V. Kutovaya
- Department of Chemistry; Lomonosov Moscow State University; 119991 Moscow Russia
| | - Elena A. Zakharova
- Department of Chemistry; Lomonosov Moscow State University; 119991 Moscow Russia
| | - Olga I. Shmatova
- Department of Chemistry; Lomonosov Moscow State University; 119991 Moscow Russia
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6
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Zakharova EA, Shmatova OI, Kutovaya IV, Khrustalev VN, Nenajdenko VG. Synthesis of macrocyclic peptidomimetics via the Ugi-click-strategy. Org Biomol Chem 2019; 17:3433-3445. [DOI: 10.1039/c9ob00229d] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The Ugi-click-strategy was employed for the synthesis of 12–28 membered 1,2,3-triazole derived macrocyclic peptidomimetics.
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Affiliation(s)
| | - Olga I. Shmatova
- Department of Chemistry
- Lomonosov Moscow State University
- Moscow
- Russia
| | - Irina V. Kutovaya
- Department of Chemistry
- Lomonosov Moscow State University
- Moscow
- Russia
| | - Victor N. Khrustalev
- Peoples’ Friendship University of Russia (RUDN University)
- Moscow 117198
- Russia
- National Research Center “Kurchatov Institute”
- 123182 Moscow
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7
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Zarezin DP, Shmatova OI, Nenajdenko VG. Chiral β 3-isocyanopropionates for multicomponent synthesis of peptides and depsipeptides containing a β-amino acid fragment. Org Biomol Chem 2018; 16:5987-5998. [PMID: 30083689 DOI: 10.1039/c8ob01507d] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An efficient three-step synthesis of a novel family of enantiomerically pure isocyanides derived from β3-isocyanopropionic acids was elaborated. Easily available N-formylated α-amino acids were used as starting materials towards this aim. The 3-step sequence (Arndt-Eistert reaction-Wolff rearrangement-dehydration) resulted in target isonitriles in good yields (up to 97%). As a result a new family of isocyanides bearing a fragment of β3-amino acids with different functional groups (amides, esters and short peptides) was obtained. It was demonstrated that these new isonitriles can be used in the Ugi and Passerini reactions to prepare short peptides and depsipeptides having a β-amino acid fragment incorporated.
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Affiliation(s)
- Danil P Zarezin
- Department of Chemistry, Lomonosov Moscow State University, Moscow, 119991, Russia.
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8
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Vorobyeva DV, Vinogradov MM, Nelyubina YV, Loginov DA, Peregudov AS, Osipov SN. Rhodium(iii)-catalyzed CF3-carbenoid C–H functionalization of 6-arylpurines. Org Biomol Chem 2018; 16:2966-2974. [PMID: 29623337 DOI: 10.1039/c8ob00645h] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
An expedient route to access a new family of fluorine-containing purine derivatives via chelation-controlled rhodium(iii)-catalyzed carbenoid C–H functionalization has been developed.
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Affiliation(s)
- Daria V. Vorobyeva
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Mikhail M. Vinogradov
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Yulia V. Nelyubina
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Dmitry A. Loginov
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Alexander S. Peregudov
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Sergey N. Osipov
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
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9
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Iagafarova IE, Vorobyeva DV, Loginov DA, Peregudov AS, Osipov SN. RhIII-Catalyzed CF3-Carbenoid C-7 Functionalization of Indolines. European J Org Chem 2017. [DOI: 10.1002/ejoc.201601400] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Irina E. Iagafarova
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov str. 28 Moscow Russia
| | - Daria V. Vorobyeva
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov str. 28 Moscow Russia
| | - Dmitry A. Loginov
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov str. 28 Moscow Russia
| | - Alexander S. Peregudov
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov str. 28 Moscow Russia
| | - Sergey N. Osipov
- A. N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov str. 28 Moscow Russia
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10
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Gorbunov A, Sokolova N, Kudryashova E, Nenajdenko V, Kovalev V, Vatsouro I. Chiral Heteroditopic Baskets Designed from Triazolated Calixarenes and Short Peptides. Chemistry 2016; 22:12415-23. [PMID: 27444143 DOI: 10.1002/chem.201601818] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2016] [Indexed: 01/06/2023]
Abstract
Cone calix[4]arenes and calix[6]arenes bearing two, three, and four short peptide units each having two chiral carbon atoms were prepared. The syntheses were performed by using an efficient modular approach that includes the Ugi preparation of the azido-peptide followed by its reactions with the propargylated calixarenes under CuAAC (Cu(I) -catalyzed azide-alkyne cycloaddition) conditions. The three novel multitopic hosts were probed for their ability to bind metal ions by UV titration, and showed the highest complexation efficiency towards copper(II) and lead(II). These two cations possessed quite different complexation modes with copper(II) bound predominantly by multiple-triazole sites, in contrast to lead(II), which is stabilized mainly by multiple interactions with amide groups of the peptide units. Circular dichroism data for the free chiral hosts, their equimolar mixtures with copper(II) perchlorate and lead(II) perchlorate, and for tertiary mixtures of all three compounds showed the formation of mono- and binuclear complexes, or a switching behavior, depending on the structure of the host and the addition order of the cations.
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Affiliation(s)
- Alexander Gorbunov
- Department of Chemistry, M. V. Lomonosov Moscow State University, Lenin's Hills 1, 119991, Moscow, Russia
| | - Nadezhda Sokolova
- Department of Chemistry, M. V. Lomonosov Moscow State University, Lenin's Hills 1, 119991, Moscow, Russia
| | - Elena Kudryashova
- Department of Chemistry, M. V. Lomonosov Moscow State University, Lenin's Hills 1, 119991, Moscow, Russia
| | - Valentine Nenajdenko
- Department of Chemistry, M. V. Lomonosov Moscow State University, Lenin's Hills 1, 119991, Moscow, Russia
| | - Vladimir Kovalev
- Department of Chemistry, M. V. Lomonosov Moscow State University, Lenin's Hills 1, 119991, Moscow, Russia
| | - Ivan Vatsouro
- Department of Chemistry, M. V. Lomonosov Moscow State University, Lenin's Hills 1, 119991, Moscow, Russia.
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11
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Affiliation(s)
| | - Aigars Jirgensons
- Latvian Institute of Organic Synthesis; Aizkraukles 21 1006 Riga Latvia
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12
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Iagafarova IE, Vorobyeva DV, Peregudov AS, Osipov SN. CF3-Carbenoid C-H Functionalization of (Hetero)arenes under Chelation-Controlled RhIIICatalysis. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500545] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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13
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Salvador CEM, Pieber B, Neu PM, Torvisco A, Kleber Z Andrade C, Kappe CO. A sequential Ugi multicomponent/Cu-catalyzed azide-alkyne cycloaddition approach for the continuous flow generation of cyclic peptoids. J Org Chem 2015; 80:4590-602. [PMID: 25842982 DOI: 10.1021/acs.joc.5b00445] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The development of a continuous flow multistep strategy for the synthesis of linear peptoids and their subsequent macrocyclization via Click chemistry is described. The central transformation of this process is an Ugi four-component reaction generating the peptidomimetic core structure. In order to avoid exposure to the often toxic and malodorous isocyanide building blocks, the continuous approach was telescoped by the dehydration of the corresponding formamide. In a concurrent operation, the highly energetic azide moiety required for the subsequent intramolecular copper-catalyzed azide-alkyne cycloaddition (Click reaction) was installed by nucleophilic substitution from a bromide precursor. All steps yielding to the linear core structures can be conveniently coupled without the need for purification steps resulting in a single process generating the desired peptidomimetics in good to excellent yields within a 25 min reaction time. The following macrocyclization was realized in a coil reactor made of copper without any additional additive. A careful process intensification study demonstrated that this transformation occurs quantitatively within 25 min at 140 °C. Depending on the resulting ring strain, either a dimeric or a monomeric form of the cyclic product was obtained.
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Affiliation(s)
- Carlos Eduardo M Salvador
- †Institute of Chemistry, University of Graz, Heinrichstrasse 28, A-8010 Graz, Austria.,‡Laboratório de Química Metodológica e Orgânica Sintética, Instituto de Química, Universidade de Brasília, Campus Universitário Darcy Ribeiro, C.P. 4478, 70904-970, Brasília-DF, Brazil
| | - Bartholomäus Pieber
- †Institute of Chemistry, University of Graz, Heinrichstrasse 28, A-8010 Graz, Austria
| | - Philipp M Neu
- †Institute of Chemistry, University of Graz, Heinrichstrasse 28, A-8010 Graz, Austria
| | - Ana Torvisco
- §Institute of Inorganic Chemistry, Graz University of Technology, Stremayrgasse 9, A-8010 Graz, Austria
| | - Carlos Kleber Z Andrade
- ‡Laboratório de Química Metodológica e Orgânica Sintética, Instituto de Química, Universidade de Brasília, Campus Universitário Darcy Ribeiro, C.P. 4478, 70904-970, Brasília-DF, Brazil
| | - C Oliver Kappe
- †Institute of Chemistry, University of Graz, Heinrichstrasse 28, A-8010 Graz, Austria
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14
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Sánchez-Roselló M, Miró J, del Pozo C, Fustero S. Differential reactivity of fluorinated homopropargylic amino esters vs gold(I) salts. The role of the nitrogen protecting group. J Fluor Chem 2015. [DOI: 10.1016/j.jfluchem.2014.09.017] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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15
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Govdi AI, Sokolova NV, Sorokina IV, Baev DS, Tolstikova TG, Mamatyuk VI, Fadeev DS, Vasilevsky SF, Nenajdenko VG. Synthesis of new betulinic acid–peptide conjugates and in vivo and in silico studies of the influence of peptide moieties on the triterpenoid core activity. MEDCHEMCOMM 2015. [DOI: 10.1039/c4md00236a] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Betulinic acid–peptide conjugates exhibit high anti-inflammatory activity.
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Affiliation(s)
- Anastasiya I. Govdi
- Institute of Chemical Kinetics and Combustion
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | | | - Irina V. Sorokina
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | - Dmitry S. Baev
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | - Tatyana G. Tolstikova
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | - Victor I. Mamatyuk
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | - Dmitry S. Fadeev
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
| | - Sergey F. Vasilevsky
- Institute of Chemical Kinetics and Combustion
- Siberian Branch of the Russian Academy of Sciences
- Novosibirsk
- Russia
- N. N. Vorozhtsov Novosibirsk Institute of Organic Chemistry
| | - Valentine G. Nenajdenko
- Department of Chemistry
- Moscow State University
- Moscow
- Russia
- A. N. Nesmeyanov Institute of Organoelement Compounds
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16
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Sokolova NV, Nenajdenko VG. Azidoisocyanides, New Bifunctional Reagents for Multicomponent Reactions and Biomolecule Modifications. Chem Nat Compd 2014. [DOI: 10.1007/s10600-014-0914-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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17
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Pérez-Labrada K, Brouard I, Méndez I, Pérez CS, Gavín JA, Rivera DG. Combined Ugi-4CR/CuAAC Approach to Triazole-Based Neoglycolipids. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402117] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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18
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Shaabani S, Shaabani A, Ng SW. One-pot synthesis of coumarin-3-carboxamides containing a triazole ring via an isocyanide-based six-component reaction. ACS COMBINATORIAL SCIENCE 2014; 16:176-83. [PMID: 24528142 DOI: 10.1021/co4001259] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A facile, efficient, and environmentally friendly approach has been developed for the diversity oriented synthesis of trifunctional coumarin-amide-triazole containing compounds. A wide variety of pharmacologically significant and structurally interesting compounds were synthesized via a one-pot, six-component, tandem Knoevenagel/Ugi/click reaction sequence from readily available starting materials in ethanol at room temperature in excellent overall yields. Substituents could be independently varied at five different positions.
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Affiliation(s)
- Shabnam Shaabani
- Faculty of Chemistry, Shahid Beheshti University, G. C., P.O. Box
19396-4716, Tehran, Iran
| | - Ahmad Shaabani
- Faculty of Chemistry, Shahid Beheshti University, G. C., P.O. Box
19396-4716, Tehran, Iran
| | - Seik Weng Ng
- Department
of Chemistry, University of Malaya, 50603, Kuala Lumpur, Malaysia
- Chemistry Department, Faculty of Science, King Abdulaziz University, P.O. Box 80203, Jeddah, Saudi Arabia
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19
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Koopmanschap G, Ruijter E, Orru RVA. Isocyanide-based multicomponent reactions towards cyclic constrained peptidomimetics. Beilstein J Org Chem 2014; 10:544-98. [PMID: 24605172 PMCID: PMC3943360 DOI: 10.3762/bjoc.10.50] [Citation(s) in RCA: 192] [Impact Index Per Article: 19.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2013] [Accepted: 01/24/2014] [Indexed: 12/16/2022] Open
Abstract
In the recent past, the design and synthesis of peptide mimics (peptidomimetics) has received much attention. This because they have shown in many cases enhanced pharmacological properties over their natural peptide analogues. In particular, the incorporation of cyclic constructs into peptides is of high interest as they reduce the flexibility of the peptide enhancing often affinity for a certain receptor. Moreover, these cyclic mimics force the molecule into a well-defined secondary structure. Constraint structural and conformational features are often found in biological active peptides. For the synthesis of cyclic constrained peptidomimetics usually a sequence of multiple reactions has been applied, which makes it difficult to easily introduce structural diversity necessary for fine tuning the biological activity. A promising approach to tackle this problem is the use of multicomponent reactions (MCRs), because they can introduce both structural diversity and molecular complexity in only one step. Among the MCRs, the isocyanide-based multicomponent reactions (IMCRs) are most relevant for the synthesis of peptidomimetics because they provide peptide-like products. However, these IMCRs usually give linear products and in order to obtain cyclic constrained peptidomimetics, the acyclic products have to be cyclized via additional cyclization strategies. This is possible via incorporation of bifunctional substrates into the initial IMCR. Examples of such bifunctional groups are N-protected amino acids, convertible isocyanides or MCR-components that bear an additional alkene, alkyne or azide moiety and can be cyclized via either a deprotection-cyclization strategy, a ring-closing metathesis, a 1,3-dipolar cycloaddition or even via a sequence of multiple multicomponent reactions. The sequential IMCR-cyclization reactions can afford small cyclic peptide mimics (ranging from four- to seven-membered rings), medium-sized cyclic constructs or peptidic macrocycles (>12 membered rings). This review describes the developments since 2002 of IMCRs-cyclization strategies towards a wide variety of small cyclic mimics, medium sized cyclic constructs and macrocyclic peptidomimetics.
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Affiliation(s)
- Gijs Koopmanschap
- Department of Chemistry & Pharmaceutical Sciences, Amsterdam Institute of Molecules, Medicines and Systems, VU University Amsterdam, de Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands
| | - Eelco Ruijter
- Department of Chemistry & Pharmaceutical Sciences, Amsterdam Institute of Molecules, Medicines and Systems, VU University Amsterdam, de Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands
| | - Romano VA Orru
- Department of Chemistry & Pharmaceutical Sciences, Amsterdam Institute of Molecules, Medicines and Systems, VU University Amsterdam, de Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands
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20
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Tsyshchuk IE, Vorobyeva DV, Peregudov AS, Osipov SN. Cu-Catalyzed Carbenoid Functionalization of Indoles by Methyl 3,3,3-Trifluoro-2-diazopropionate. European J Org Chem 2014. [DOI: 10.1002/ejoc.201301734] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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21
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Sokolova NV, Nenajdenko VG, Sokolov VB, Vinogradova DV, Shevtsova EF, Dubova LG, Bachurin SO. Synthesis and biological activity of N-substituted-tetrahydro-γ-carbolines containing peptide residues. Beilstein J Org Chem 2014; 10:155-62. [PMID: 24454569 PMCID: PMC3896248 DOI: 10.3762/bjoc.10.13] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2013] [Accepted: 12/06/2013] [Indexed: 11/30/2022] Open
Abstract
The synthesis of novel peptide conjugates of N-substituted-tetrahydro-γ-carbolines has been performed using the sequence of the Ugi multicomponent reaction and Cu(I)-catalyzed click chemistry. The effect of obtained γ-carboline-peptide conjugates on the rat liver mitochondria was evaluated. It was found that all compounds in the concentration of 30 µM did onot induce depolarization of mitochondria but possessed some inhibitory effect on the mitochondria permeability transition. The original N-substituted-tetrahydro-γ-carbolines containing an terminal alkyne group demonstrated a high prooxidant activity, whereas their conjugates with peptide fragments slightly inhibited both autooxidation and the t-BHP-induced lipid peroxidation.
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Affiliation(s)
- Nadezhda V Sokolova
- Department of Chemistry, Moscow State University, Leninskie Gory 1, Moscow, 119992, Russia
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, Severny proezd 1, Chernogolovka, 142432, Russia
| | - Valentine G Nenajdenko
- Department of Chemistry, Moscow State University, Leninskie Gory 1, Moscow, 119992, Russia
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Vavilov str. 28, 119991 Moscow, Russian Federation
| | - Vladimir B Sokolov
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, Severny proezd 1, Chernogolovka, 142432, Russia
| | - Daria V Vinogradova
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, Severny proezd 1, Chernogolovka, 142432, Russia
| | - Elena F Shevtsova
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, Severny proezd 1, Chernogolovka, 142432, Russia
| | - Ludmila G Dubova
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, Severny proezd 1, Chernogolovka, 142432, Russia
| | - Sergey O Bachurin
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, Severny proezd 1, Chernogolovka, 142432, Russia
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Govdi AI, Vasilevsky SF, Sokolova NV, Sorokina IV, Tolstikova TG, Nenajdenko VG. Betulonic acid–peptide conjugates: synthesis and evaluation of anti-inflammatory activity. MENDELEEV COMMUNICATIONS 2013. [DOI: 10.1016/j.mencom.2013.09.007] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Sokolova NV, Nenajdenko VG. Recent advances in the Cu(i)-catalyzed azide–alkyne cycloaddition: focus on functionally substituted azides and alkynes. RSC Adv 2013. [DOI: 10.1039/c3ra42482k] [Citation(s) in RCA: 116] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
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