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Haverkamp C, Liu C, Schneller SW. Enantiomeric 4'-truncated 6'-fluoro-3-deazaneplanocin and its 3-bromo derivative: Synthesis and antiviral properties, including Ebola and Marburg. Bioorg Med Chem Lett 2021; 41:127985. [PMID: 33766766 DOI: 10.1016/j.bmcl.2021.127985] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Revised: 03/10/2021] [Accepted: 03/16/2021] [Indexed: 10/21/2022]
Abstract
In seeking to increase the library of fluorine containing adenine-derived carbocyclic nucleoside antiviral candidates, d-like and l-like 6'-fluoro-3-deazaneplanocin and its 3-bromo derivative lacking the 4'-hydroxylmethylene substituent (2/3 and 4/5, respectively) are presented. Their synthesis was accomplished from d-ribose by developing a more facile precursor route than suggested by the literature. The 2/4d-like pair displayed significant anti-filo virial properties while the enantiomeric l-like congeners 3/5 were inactive. Target compounds 2/4 also were active towards measles and norovirus. The effect of 2/4 is further evidence of the role fluoro-derived adenine carbocyclic nucleoside can play in antiviral drug discovery. Furthermore, the simplicity of their synthesis lends them to more efficacious analogs and to scale-up optimization. There were no other relevant antiviral properties for 2/3 and 4/5 (except BK polyomavirus for 3/5).
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Affiliation(s)
- Chloe Haverkamp
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL, United States
| | - Chong Liu
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL, United States
| | - Stewart W Schneller
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL, United States.
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2
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Liu C, Coleman R, Archer A, Hussein I, Bowlin TL, Chen Q, Schneller SW. Enantiomeric 4'-Truncated 3-deaza-1',6'-isoneplanocins: Synthesis and antiviral properties including Ebola. Bioorg Med Chem Lett 2019; 29:2480-2482. [PMID: 31358469 DOI: 10.1016/j.bmcl.2019.07.021] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2019] [Revised: 07/08/2019] [Accepted: 07/10/2019] [Indexed: 10/26/2022]
Abstract
Enantiomeric 3-deaza-1',6'-isoneplanocins (C-3 unsubstituted 7a/7b and C-3 with a bromine 8a/8b) lacking the 4'-hydroxymethyl as mechanistically designed anti-viral targets have been prepared by utilizing the Ullmann reaction. Anti-Ebola properties were found for the D-like 7a and 8a and L-like 8b. All four products showed effects against human cytomegalovirus while D-like 7a/8a affected measles; 7a was effective versus norovirus and 8a inhibited Pichinde. Both 7a and 8a produced SAHase inhibitory effects. However, the anti-EBOV activity of 7a and 8a cannot be readily correlated with this observation due with their contrasting IC50 values (8a > 7a). It is to be noted that 7b showed no effects on this enzyme and 8b was minimally inhibitory. These results offer preliminary insight into the differing mechanisms of action of D- and L- like structures and enlighten structural features to guide additional antiviral agent pursuit in the isoneplanocin series.
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Affiliation(s)
- Chong Liu
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL 36849-5312, United States
| | - Rachel Coleman
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL 36849-5312, United States
| | - Ashley Archer
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL 36849-5312, United States
| | - Islam Hussein
- Microbiotix, Inc., One Innovation Drive, Worcester, MA 01605, United States
| | - Terry L Bowlin
- Microbiotix, Inc., One Innovation Drive, Worcester, MA 01605, United States
| | - Qi Chen
- Department of Chemistry, Slippery Rock University, Slippery Rock, PA 16057, United States
| | - Stewart W Schneller
- Molette Laboratory for Drug Discovery, Department of Chemistry and Biochemistry, Auburn University, Auburn, AL 36849-5312, United States.
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3
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Liu C, Chen Q, Cardinale S, Bowlin TL, Schneller SW. 6′-Fluoro-3-deazaneplanocin: Synthesis and antiviral properties, including Ebola. Bioorg Med Chem Lett 2018; 28:3674-3675. [DOI: 10.1016/j.bmcl.2018.10.030] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Revised: 10/18/2018] [Accepted: 10/20/2018] [Indexed: 11/25/2022]
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4
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Simeonov SP, Nunes JPM, Guerra K, Kurteva VB, Afonso CAM. Synthesis of Chiral Cyclopentenones. Chem Rev 2016; 116:5744-893. [DOI: 10.1021/cr500504w] [Citation(s) in RCA: 159] [Impact Index Per Article: 19.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Svilen P. Simeonov
- Institute
of Organic Chemistry with Centre of Phytochemistry, Bulgarian Academy of Sciences, Acad. G. Bonchev str, bl.9, 1113 Sofia, Bulgaria
| | - João P. M. Nunes
- Department
of Chemistry, University College London, London WC1H 0AJ, United Kingdom
| | - Krassimira Guerra
- Research
Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa, Av. Prof. Gama Pinto, 1649-003 Lisboa, Portugal
| | - Vanya B. Kurteva
- Institute
of Organic Chemistry with Centre of Phytochemistry, Bulgarian Academy of Sciences, Acad. G. Bonchev str, bl.9, 1113 Sofia, Bulgaria
| | - Carlos A. M. Afonso
- Research
Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa, Av. Prof. Gama Pinto, 1649-003 Lisboa, Portugal
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Liu C, Chen Q, Schneller SW. Enantiomeric 3-deaza-1′,6′-isoneplanocin and its 3-bromo analogue: Synthesis by the Ullmann reaction and their antiviral properties. Bioorg Med Chem Lett 2016; 26:928-930. [DOI: 10.1016/j.bmcl.2015.12.061] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2015] [Revised: 12/17/2015] [Accepted: 12/18/2015] [Indexed: 11/28/2022]
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Leclere L, Fransolet M, Cambier P, El Bkassiny S, Tikad A, Dieu M, Vincent SP, Van Cutsem P, Michiels C. Identification of a cytotoxic molecule in heat-modified citrus pectin. Carbohydr Polym 2015; 137:39-51. [PMID: 26686103 DOI: 10.1016/j.carbpol.2015.10.055] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2015] [Revised: 10/13/2015] [Accepted: 10/14/2015] [Indexed: 01/07/2023]
Abstract
Modified forms of citrus pectin possess anticancer properties. However, their mechanism of action and the structural features involved remain unclear. Here, we showed that citrus pectin modified by heat treatment displayed cytotoxic effects in cancer cells. A fractionation approach was used aiming to identify active molecules. Dialysis and ethanol precipitation followed by HPLC analysis evidenced that most of the activity was related to molecules with molecular weight corresponding to low degree of polymerization oligogalacturonic acid. Heat-treatment of galacturonic acid also generated cytotoxic molecules. Furthermore, heat-modified galacturonic acid and heat-fragmented pectin contained the same molecule that induced cell death when isolated by HPLC separation. Mass spectrometry analyses revealed that 4,5-dihydroxy-2-cyclopenten-1-one was one cytotoxic molecule present in heat-treated pectin. Finally, we synthesized the enantiopure (4R,5R)-4,5-dihydroxy-2-cyclopenten-1-one and demonstrated that this molecule was cytotoxic and induced a similar pattern of apoptotic-like features than heat-modified pectin.
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Affiliation(s)
- Lionel Leclere
- Laboratory of Biochemistry and Cellular Biology-URBC, NARILIS, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Maude Fransolet
- Laboratory of Biochemistry and Cellular Biology-URBC, NARILIS, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Pierre Cambier
- Laboratory of Plant Cellular Biology-URBV, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Sandy El Bkassiny
- Organic Chemistry Research Unit (UCO), University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Abdellatif Tikad
- Organic Chemistry Research Unit (UCO), University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Marc Dieu
- Laboratory of Biochemistry and Cellular Biology-URBC, NARILIS, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Stéphane P Vincent
- Organic Chemistry Research Unit (UCO), University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Pierre Van Cutsem
- Laboratory of Plant Cellular Biology-URBV, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
| | - Carine Michiels
- Laboratory of Biochemistry and Cellular Biology-URBC, NARILIS, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium.
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2- and 3-Fluoro-3-deazaneplanocins, 2-fluoro-3-deazaaristeromycins, and 3-methyl-3-deazaneplanocin: Synthesis and antiviral properties. Bioorg Med Chem 2015; 23:5496-501. [DOI: 10.1016/j.bmc.2015.07.039] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2015] [Revised: 07/11/2015] [Accepted: 07/19/2015] [Indexed: 11/16/2022]
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Abstract
Nucleoside analogs are extremely useful for the development of therapeutic agents to control viral diseases and cancer. Among the numerous modifications on the nucleoside skeleton, replacement of the oxygen of the furanose ring by a CH2 group resulted in increased flexibility and higher resistance to phosphorylases and led to carbocyclic nucleoside analogs (or carbanucleosides). The broad spectrum of biological activities of carbocyclic nucleosides led to tremendous research interest in their syntheses. The article documents recent strategies for the synthesis of active carbocyclic nucleosides by presenting individual case studies, such as the neplanocins, entecavir and selected fluorinated carbocyclic nucleosides. Furthermore, it provides new insights into new directions for more potent and active carbocyclic nucleoside analogs.
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Herndon JW. The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2012. Coord Chem Rev 2014. [DOI: 10.1016/j.ccr.2014.02.026] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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W. Schneller S, Chen C, Ye W. A CONVENIENT SYNTHESIS OF THE L-LIKE ENANTIOMER OF 4'-METHYL-3-dEAZAARISTEROMYCIN. HETEROCYCLES 2012. [DOI: 10.3987/com-12-s(n)20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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