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Taherzadeh M, Pourayoubi M, Vahdani Alviri B, Shoghpour Bayraq S, Ariani M, Nečas M, Dušek M, Eigner V, Amiri Rudbari H, Bruno G, Mancilla Percino T, Leyva-Ramírez MA, Damodaran K. Hydrogen-bond directionality and symmetry in [C(O)NH](N) 2P(O)-based structures: a comparison between X-ray crystallography data and neutron-normalized values, and evaluation of reliability. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2021; 77:384-396. [PMID: 34096521 DOI: 10.1107/s2052520621003371] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 03/29/2021] [Indexed: 06/12/2023]
Abstract
For [C(O)NH](N)2P(O)-based structures, the magnitude of the differences in the N-H...O, H...O=P and H...O=C angles has been evaluated when the N-H bond lengths, determined by X-ray diffraction, were compared to the neutron normalized values and the maximum percentage difference was obtained, i.e. about 3% for the angle even if the N-H bond lengths have a difference of about 30% (0.7 Å for the X-ray and 1.03 Å for the neutron-normalized value). The symmetries of the crystals are discussed with respect to the symmetry of the molecules, as well as to the symmetry of hydrogen-bonded motifs, and the role of the most directional hydrogen bond in raising the probability of obtaining centrosymmetric crystal structures is investigated. The work was performed by considering nine new X-ray crystal structures and 204 analogous structures retrieved from the Cambridge Structural Database.
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Affiliation(s)
- Maryam Taherzadeh
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Mehrdad Pourayoubi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | | | - Samad Shoghpour Bayraq
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Maral Ariani
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Marek Nečas
- Department of Chemistry, Masaryk University, Kotlarska 2, Brno, 61137, Czech Republic
| | - Michal Dušek
- Institute of Physics, Czech Academy of Sciences, Na Slovance 2, Prague 8, 182 21, Czech Republic
| | - Václav Eigner
- Institute of Physics, Czech Academy of Sciences, Na Slovance 2, Prague 8, 182 21, Czech Republic
| | - Hadi Amiri Rudbari
- Department of Chemistry, University of Isfahan, Isfahan 81746-73441, Iran
| | - Giuseppe Bruno
- Department of Chemical Sciences, University of Messina, Via F. Stagnod'Alcontres 31, Messina 98166, Italy
| | - Teresa Mancilla Percino
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Apartado Postal 14-740, 07000, Ciudad de México, México
| | - Marco A Leyva-Ramírez
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Apartado Postal 14-740, 07000, Ciudad de México, México
| | - Krishnan Damodaran
- Department of Chemistry, University of Pittsburgh, Pittsburgh, PA 15260, USA
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Yu J, Zhu W, Tan H, Peng Q. A novel D2-A-D1-A-D2-type donor–acceptor conjugated small molecule based on a benzo[1,2-b:4,5-b′]dithiophene core for solution processed organic photovoltaic cells. Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2016.10.076] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Mohammadiannejad-Abbasabadi K, Mohammadpoor-Baltork I, Tangestaninejad S, Moghadam M, Mirkhani V, Kia R. Bi(OTf)3-catalysed domino Friedel–Crafts alkylation of arenes with aldehydes: an upgraded method for efficient synthesis of triarylmethanes and anthracene derivatives. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.01.041] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Ho JH, Chen YH, Chou LT, Lai PW, Chen PS. The improvement of π-conjugation by the lateral benzene of anthracene and naphthalene. Tetrahedron Lett 2014. [DOI: 10.1016/j.tetlet.2014.08.097] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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