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Wang J, Feng X, Liu X, Wang G, Xiong Y, Zhang L, Zhang Y, Lu H. In-Depth Profiling of 4-Hydroxy-2-nonenal Modification via Reversible Thiazolidine Chemistry. Anal Chem 2024; 96:5125-5133. [PMID: 38502245 DOI: 10.1021/acs.analchem.3c05060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/21/2024]
Abstract
Protein modification by lipid-derived electrophiles (LDEs) is associated with various signaling pathways. Among these LDEs, 4-hydroxy-2-nonenal (HNE) is the most toxic, and protein modified with HNE has been linked to various diseases, including Alzheimer's and Parkinson's. However, due to their low abundance, in-depth profiling of HNE modifications still presents challenges. This study introduces a novel strategy utilizing reversible thiazolidine chemistry to selectively capture HNE-modified proteins and a palladium-mediated cleavage reaction to release them. Thousands of HNE-modified sites in different cell lines were identified. Combined with ABPP, we discovered a set of HNE-sensitive sites that offer a new tool for studying LDE modifications in proteomes.
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Affiliation(s)
- Jun Wang
- Liver Cancer Institute, Zhongshan Hospital and Department of Chemistry, Fudan University, Shanghai 200032, China
| | - Xiaoxiao Feng
- Institutes of Biomedical Sciences and NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai 200032, P. R. China
| | - Xuejiao Liu
- Institutes of Biomedical Sciences and NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai 200032, P. R. China
| | - Guoli Wang
- Institutes of Biomedical Sciences and NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai 200032, P. R. China
| | - Yingying Xiong
- Liver Cancer Institute, Zhongshan Hospital and Department of Chemistry, Fudan University, Shanghai 200032, China
| | - Lei Zhang
- Institutes of Biomedical Sciences and NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai 200032, P. R. China
| | - Ying Zhang
- Liver Cancer Institute, Zhongshan Hospital and Department of Chemistry, Fudan University, Shanghai 200032, China
- Institutes of Biomedical Sciences and NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai 200032, P. R. China
| | - Haojie Lu
- Liver Cancer Institute, Zhongshan Hospital and Department of Chemistry, Fudan University, Shanghai 200032, China
- Institutes of Biomedical Sciences and NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai 200032, P. R. China
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2
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Wang Y, Song C, Xing Y, Shen S, Bo T, Zhang N, Wang J, Shi T, Huo S. l-Methionine Selenoxide as an Oxidizing and Deprotection Reagent for the Synthesis of Multiple Disulfide Bonds in Peptides. J Org Chem 2023; 88:8123-8132. [PMID: 37235643 DOI: 10.1021/acs.joc.3c00104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
The regioselective synthesis of multiple disulfide bonds in peptides has been a significant challenge in synthetic peptide chemistry. In this work, two disulfide bonds in peptides were regioselectively synthesized via an approach of MetSeO oxidation and deprotection reaction (SeODR), in which the first disulfide bond was constructed through oxidation of dithiol by MetSeO in a neutral buffer, and the second disulfide bond was then directly constructed through the deprotection of two Acm groups or one Acm group and one Thz group by MetSeO in acidic media. Synthesis of two disulfide bonds by the SeODR approach was achieved through a one-pot manner. Moreover, the SeODR approach is compatible with the synthesis of peptides containing methionine residues. Both H+ and Br- drastically promoted the reaction rate of SeODR. The mechanistic picture for the SeODR approach was delineated, in which the formation of a stable Se-X-S bridge as the transition state plays a critical role. The SeODR approach was also utilized to construct the three disulfide bonds in linaclotide, conferring a reasonable yield.
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Affiliation(s)
- Yafang Wang
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Changying Song
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Yueyue Xing
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Shigang Shen
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Tianyu Bo
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Nan Zhang
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Jixu Wang
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
| | - Tiesheng Shi
- College of Chemistry, Chemical Engineering and Materials Science, Zaozhuang University, Zaozhuang 277160, Shandong Province, China
| | - Shuying Huo
- College of Chemistry and Materials Science, Key Laboratory of Analytical Science and Technology of Hebei Province, and MOE Key Laboratory of Medicinal Chemistry and Molecular Diagnostics, Hebei University, Baoding 071002, Hebei Province, China
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Xing Y, Wang Y, Ma D, Shen S, Song C, Zhang N, Bo T, Shi T, Huo S. N-Halosuccinimides mediated deprotection of cysteine-S protecting groups for one-pot regioselective synthesis of disulfide bonds in peptides under mild aqueous conditions. Tetrahedron Lett 2023. [DOI: 10.1016/j.tetlet.2023.154459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/31/2023]
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Gorla MR, Sarma M. Synthesis of Pyrazole–Oxothiazolidine Hybrids as Potential Anticancer Agents in [Bmim]OH Ionic Liquid Medium. RUSSIAN JOURNAL OF ORGANIC CHEMISTRY 2022. [DOI: 10.1134/s1070428022040157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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5
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Aziz MN, Patel A, Iskander A, Chini A, Gout D, Mandal SS, Lovely CJ. One-Pot Synthesis of Novel 2-Imino-5-Arylidine-Thiazolidine Analogues and Evaluation of Their Anti-Proliferative Activity against MCF7 Breast Cancer Cell Line. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27030841. [PMID: 35164106 PMCID: PMC8840064 DOI: 10.3390/molecules27030841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 01/14/2022] [Accepted: 01/21/2022] [Indexed: 11/20/2022]
Abstract
An efficient surface-mediated synthetic method to facilitate access to a novel class of thiazolidines is described. The rationale behind the design of the targeted thiazolidines was to prepare stable thiazolidine analogues and evaluate their anti-proliferative activity against a breast cancer cell line (MCF7). Most of the synthesized analogues exhibited increased potency ranging from 2–15-fold higher compared to the standard reference, cisplatin. The most active thiazolidines contain a halogenated or electron withdrawing group attached to the N-phenyl ring of exocyclic 2-imino group. However, combination of the two substituents did not enhance the activity. The anti-proliferative activity was measured in terms of IC50 values using an MTT assay.
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Affiliation(s)
- Marian N. Aziz
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
- Department of Pesticide Chemistry, National Research Centre, Dokki, Giza 12622, Egypt
| | - Arzoo Patel
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
| | - Amany Iskander
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
| | - Avisankar Chini
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
| | - Delphine Gout
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
| | - Subhrangsu S. Mandal
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
| | - Carl J. Lovely
- Department of Chemistry and Biochemistry, University of Texas-Arlington, Arlington, TX 76019-0065, USA; (M.N.A.); (A.P.); (A.I.); (A.C.); (D.G.); (S.S.M.)
- Correspondence:
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Chong YK, Chandrashekar C, Zhao D, Maki Y, Okamoto R, Kajihara Y. Optimization of Semisynthetic Approach for Glycosyl Interferon-β-polypeptide by Utilizing Bacterial Protein Expression and Chemical Modification. Org Biomol Chem 2022; 20:1907-1915. [DOI: 10.1039/d1ob02391h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Synthesis of a sufficient amount of homogenous glycoprotein is of great interest because the natural glycoproteins show a considerable heterogeneity in oligosaccharide structures making the studies of glycan structure-function relationship...
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7
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Synthesis, crystal structural determination and in silco biological studies of 3,3′-ethane-1,2-diylbis(2-benzylidene-1,3-thiazolidin-4-one. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130997] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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8
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Spears RJ, McMahon C, Chudasama V. Cysteine protecting groups: applications in peptide and protein science. Chem Soc Rev 2021; 50:11098-11155. [PMID: 34605832 DOI: 10.1039/d1cs00271f] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Protecting group chemistry for the cysteine thiol group has enabled a vast array of peptide and protein chemistry over the last several decades. Increasingly sophisticated strategies for the protection, and subsequent deprotection, of cysteine have been developed, facilitating synthesis of complex disulfide-rich peptides, semisynthesis of proteins, and peptide/protein labelling in vitro and in vivo. In this review, we analyse and discuss the 60+ individual protecting groups reported for cysteine, highlighting their applications in peptide synthesis and protein science.
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Affiliation(s)
| | - Clíona McMahon
- Department of Chemistry, University College London, London, UK.
| | - Vijay Chudasama
- Department of Chemistry, University College London, London, UK.
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9
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Katayama H, Nagata K. Application of 2,2'-dipyridyl disulfide-mediated thiazolidine ring-opening reaction to glycoprotein synthesis: Total chemical synthesis of evasin-3. J Pept Sci 2020; 27:e3290. [PMID: 33118239 DOI: 10.1002/psc.3290] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 09/10/2020] [Accepted: 09/22/2020] [Indexed: 11/07/2022]
Abstract
Thiazolidine ring-opening reaction is one of the key steps in protein chemical synthesis via sequential native chemical ligation strategy. We recently developed a novel thiazolidine ring-opening reaction with 2,2'-dipyridyl disulfide (DPDS). In order to investigate the applicability of this reaction to glycoprotein synthesis, we synthesized evasin-3, a cysteine-rich glycoprotein with chemokine-binding ability originally found in tick saliva. The sequence of evasin-3 was divided into three segments, and these segments were separately synthesized with the ordinary solid-phase peptide synthesis method. After the first ligation of middle and C-terminal segments, thiazolidine used as a protecting group of Cys residue at the N-terminus of the middle segment was converted to Cys with DPDS. In this thiazolidine ring-opening reaction, DPDS treatment did not affect the N-linked glycan moiety. After the second ligation with the N-terminal segment and the refolding reaction, evasin-3 could be obtained in good yield. The synthetic evasin-3 showed the binding ability specifically to CXCL chemokines. These results clearly indicate that this DPDS method is useful for glycoprotein synthesis.
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Affiliation(s)
- Hidekazu Katayama
- Department of Applied Biochemistry, School of Engineering, Tokai University, Hiratsuka, Japan
| | - Koji Nagata
- Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo, Japan
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Duruskari GS, Asgarova AR, Aliyeva KN, Musayeva SA, Maharramov AM. Condensation Products of Aldehydes with Phenylthiazolidine
Obtained from (1,2-Dibromoethyl)benzene. RUSSIAN JOURNAL OF ORGANIC CHEMISTRY 2020. [DOI: 10.1134/s1070428020040223] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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11
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Sahiba N, Sethiya A, Soni J, Agarwal DK, Agarwal S. Saturated Five-Membered Thiazolidines and Their Derivatives: From Synthesis to Biological Applications. Top Curr Chem (Cham) 2020; 378:34. [PMID: 32206929 PMCID: PMC7101601 DOI: 10.1007/s41061-020-0298-4] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Accepted: 03/07/2020] [Indexed: 02/06/2023]
Abstract
In past decades, interdisciplinary research has been of great interest for scholars. Thiazolidine motifs behave as a bridge between organic synthesis and medicinal chemistry and compel researchers to explore new drug candidates. Thiazolidine motifs are very intriguing heterocyclic five-membered moieties present in diverse natural and bioactive compounds having sulfur at the first position and nitrogen at the third position. The presence of sulfur enhances their pharmacological properties, and, therefore, they are used as vehicles in the synthesis of valuable organic combinations. They show varied biological properties viz. anticancer, anticonvulsant, antimicrobial, anti-inflammatory, neuroprotective, antioxidant activity and so on. This diversity in the biological response makes it a highly prized moiety. Based on literature studies, various synthetic approaches like multicomponent reaction, click reaction, nano-catalysis and green chemistry have been employed to improve their selectivity, purity, product yield and pharmacokinetic activity. In this review article, we have summarized systematic approaches for the synthesis of thiazolidine and its derivatives, along with their pharmacological activity, including advantages of green synthesis, atom economy, cleaner reaction profile and catalyst recovery which will help scientists to probe and stimulate the study of these scaffolds.
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Affiliation(s)
- Nusrat Sahiba
- Department of Chemistry, Synthetic Organic Chemistry Laboratory, MLSU, Udaipur, 313001 India
| | - Ayushi Sethiya
- Department of Chemistry, Synthetic Organic Chemistry Laboratory, MLSU, Udaipur, 313001 India
| | - Jay Soni
- Department of Chemistry, Synthetic Organic Chemistry Laboratory, MLSU, Udaipur, 313001 India
| | - Dinesh K. Agarwal
- Department of Pharmacy, B. N. University, MLSU, Udaipur, 313001 India
| | - Shikha Agarwal
- Department of Chemistry, Synthetic Organic Chemistry Laboratory, MLSU, Udaipur, 313001 India
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Naruse N, Kobayashi D, Ohkawachi K, Shigenaga A, Otaka A. Copper-Mediated Deprotection of Thiazolidine and Selenazolidine Derivatives Applied to Native Chemical Ligation. J Org Chem 2019; 85:1425-1433. [PMID: 31592642 DOI: 10.1021/acs.joc.9b02388] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cupric sulfate efficiently opens thiazolidine and selenazolidine rings, producing a protected N-terminal cysteine or selenocysteine derivative without the use of inert gas or solvent. This is a clear advantage over methods that use water-soluble palladium salts, which fail to react with the selenazolidine ring. This copper-mediated reaction proceeds with monovalent or divalent copper ions, and disulfide bond formation followed by ring-opening promotes the process. This copper-mediated reaction, which is compatible with the standard native chemical ligation conditions, was applied to the synthesis of the 77-mer CXCL14 protein.
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Affiliation(s)
- Naoto Naruse
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences , Tokushima University , Tokushima 770-8505 , Japan
| | - Daishiro Kobayashi
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences , Tokushima University , Tokushima 770-8505 , Japan
| | - Kento Ohkawachi
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences , Tokushima University , Tokushima 770-8505 , Japan
| | - Akira Shigenaga
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences , Tokushima University , Tokushima 770-8505 , Japan
| | - Akira Otaka
- Institute of Biomedical Sciences and Graduate School of Pharmaceutical Sciences , Tokushima University , Tokushima 770-8505 , Japan
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Bermejo-Velasco D, Nawale GN, Oommen OP, Hilborn J, Varghese OP. Thiazolidine chemistry revisited: a fast, efficient and stable click-type reaction at physiological pH. Chem Commun (Camb) 2018; 54:12507-12510. [DOI: 10.1039/c8cc05405c] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
We describe the fast reaction kinetics between 1,2-aminothiols and aldehydes that afforded a stable thiazolidine product under physiological pH. This efficient and biocompatible reaction offers enormous potential for the coupling of biomolecules.
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Affiliation(s)
- Daniel Bermejo-Velasco
- Translational Chemical Biology Laboratory
- Division of Polymer Chemistry
- Department of Chemistry-Ångstrom
- Uppsala University
- Uppsala
| | - Ganesh N. Nawale
- Translational Chemical Biology Laboratory
- Division of Polymer Chemistry
- Department of Chemistry-Ångstrom
- Uppsala University
- Uppsala
| | - Oommen P. Oommen
- Bioengineering and Nanomedicine Lab
- Faculty of Biomedical Sciences and Engineering
- Tampere University of Technology, and BioMediTech Institute
- Tampere
- Finland
| | - Jöns Hilborn
- Translational Chemical Biology Laboratory
- Division of Polymer Chemistry
- Department of Chemistry-Ångstrom
- Uppsala University
- Uppsala
| | - Oommen P. Varghese
- Translational Chemical Biology Laboratory
- Division of Polymer Chemistry
- Department of Chemistry-Ångstrom
- Uppsala University
- Uppsala
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