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Koshizuka M, Takahashi N, Shimada N. Organoboron catalysis for direct amide/peptide bond formation. Chem Commun (Camb) 2024; 60:11202-11222. [PMID: 39196535 DOI: 10.1039/d4cc02994a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/29/2024]
Abstract
Amides and peptides are ubiquitous functional groups found in several natural and artificial materials, and they are essential for the advancement of life and material sciences. In particular, their relevance in clinical medicine and drug discovery has increased in recent years. Dehydrative condensation of readily available carboxylic acids with amines is the most "direct" method for amide synthesis; however, this methodology generally requires a stoichiometric amount of condensation agent (coupling reagent). Catalytic direct dehydrative amidation has become an "ideal" methodology for synthesizing amides from the perspective of green chemistry, with water as the only byproduct in principle, high atom efficiency, environmentally friendly, energy saving, and safety. Conversely, organoboron compounds, such as boronic acids, which are widely used in various industries as coupling reagents for Suzuki-Miyaura cross-coupling reactions or pharmaceutical structures, are environmentally friendly molecules that have low toxicity and are easy to handle. Based on the chemical properties of organoboron compounds, they have potential Lewis acidity and the ability to form reversible covalent bonds with dehydration, making them attractive as catalysts. This review explores studies on the development of direct dehydrative amide/peptide bond formation reactions from carboxylic acids using organoboron catalysis, classifying them based on chemical bonding and catalysis over approximately 25 years, from the early developmental days to 2023.
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Affiliation(s)
- Masayoshi Koshizuka
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, 5-9-1 Shirokane, Minatao-ku, Tokyo 108-8641, Japan
| | - Naoya Takahashi
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, 5-9-1 Shirokane, Minatao-ku, Tokyo 108-8641, Japan
| | - Naoyuki Shimada
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, 3-25-40 Sakurajosui, Setagaya-ku, Tokyo 156-8550, Japan.
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Catalytic and non-catalytic amidation of carboxylic acid substrates. Mol Divers 2021; 26:1311-1344. [PMID: 34120303 DOI: 10.1007/s11030-021-10252-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Accepted: 06/08/2021] [Indexed: 10/21/2022]
Abstract
The present review offers an apt summary of amide bond formation with carboxylic acid substrates by taking advantage of several methods. Carboxamides can be regarded as a substantial part of organic and medicinal chemistry due to their utility in synthesizing peptides, lactams, and more than 25% of familiar drugs. Moreover, they play a leading role in the synthesis of bioactive products with anticancer, antifungal, and antibacterial properties. The data are arranged based on the type and amount of reagents used to conduct amidation and are also divided into the following categories: catalytic amidation of carboxylic acids, non-catalytic amidation, and transamidation.
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Yılmaz Ö, Çevik PK, Yılmaz MK. Synthesis of New Substituted Diamides. Investigation of Their Antioxidant and Antibacterial Properties. RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 2021. [DOI: 10.1134/s1068162021020278] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Affiliation(s)
- Mihajlo Todorovic
- Department of Chemistry University of British Columbia Vancouver British Columbia Canada
| | - David M. Perrin
- Department of Chemistry University of British Columbia Vancouver British Columbia Canada
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Reyes RL, Sato M, Iwai T, Suzuki K, Maeda S, Sawamura M. RETRACTED: Asymmetric remote C-H borylation of aliphatic amides and esters with a modular iridium catalyst. Science 2020; 369:970-974. [PMID: 32820123 DOI: 10.1126/science.abc8320] [Citation(s) in RCA: 87] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Accepted: 06/29/2020] [Indexed: 01/14/2023]
Abstract
Site selectivity and stereocontrol remain major challenges in C-H bond functionalization chemistry, especially in linear aliphatic saturated hydrocarbon scaffolds. We report the highly enantioselective and site-selective catalytic borylation of remote C(sp3)-H bonds γ to the carbonyl group in aliphatic secondary and tertiary amides and esters. A chiral C-H activation catalyst was modularly assembled from an iridium center, a chiral monophosphite ligand, an achiral urea-pyridine receptor ligand, and pinacolatoboryl groups. Quantum chemical calculations support an enzyme-like structural cavity formed by the catalyst components, which bind the substrate through multiple noncovalent interactions. Versatile synthetic utility of the enantioenriched γ-borylcarboxylic acid derivatives was demonstrated.
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Affiliation(s)
- Ronald L Reyes
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan.,Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Miyu Sato
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Tomohiro Iwai
- Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Kimichi Suzuki
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan.,Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Satoshi Maeda
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan.,Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Masaya Sawamura
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo 001-0021, Japan. .,Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
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Cao Y, Sun W, Luo G, Yu Y, Zhou Y, Zhao Y, Yang J, Luo Y. Mechanistic Insights into La-Catalyzed Amidation of Aldehyde with Amine. Org Lett 2020; 22:705-708. [PMID: 31873034 DOI: 10.1021/acs.orglett.9b04445] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A new mechanism of La-catalyzed amidation of N-methylbenzylamine with p-chlorobenzaldehyde has been computationally proposed, where L2La[NR1R2] (I) rather than previously proposed L2La[OCHRNR1R2] (II) is the catalytically active species. Interestingly, the side-product alcohol acting as a proton relay to reduce reaction energy barrier could participate in the regeneration of I. Besides, DFT calculations suggest that an addition of alcohol additive into the initial reaction system could accelerate the reaction, which has been further verified by experiments.
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Affiliation(s)
- Yu Cao
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Wuding Sun
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Gen Luo
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Yang Yu
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Yuhan Zhou
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Yanan Zhao
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Jimin Yang
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
| | - Yi Luo
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering , Dalian University of Technology , Dalian 116024 , China
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YILMAZ Ö. Synthesis of trans-diamide derivatives from fumaryl chloride and determination of DPPH scavenging activity of synthesized molecules. JOURNAL OF THE TURKISH CHEMICAL SOCIETY, SECTION A: CHEMISTRY 2019. [DOI: 10.18596/jotcsa.627805] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
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Sivasakthikumaran R, Jambu S, Jeganmohan M. Ruthenium(II)-Catalyzed Distal Weak O-Coordinating C–H Alkylation of Arylacetamides with Alkenes: Combined Experimental and DFT Studies. J Org Chem 2019; 84:3977-3989. [DOI: 10.1021/acs.joc.8b03257] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | - Subramanian Jambu
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, Tamil Nadu, India
| | - Masilamani Jeganmohan
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, Tamil Nadu, India
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