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The Draft Genome Sequence of Pseudomonas frederiksbergensis Strain 11-D3 Reveals Its Ability To Mobilize Phosphorus. Microbiol Resour Announc 2019; 8:8/11/e01321-18. [PMID: 30938323 PMCID: PMC6424207 DOI: 10.1128/mra.01321-18] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
Pseudomonas frederiksbergensis strain 11-D3 is a Gram-negative, nonmotile, aerobic bacterium isolated from a managed maize field in North China. This strain displays high efficiency for solubilization of inorganic phosphorus (P). Pseudomonas frederiksbergensis strain 11-D3 is a Gram-negative, nonmotile, aerobic bacterium isolated from a managed maize field in North China. This strain displays high efficiency for solubilization of inorganic phosphorus (P). We present the draft genome sequence of strain 11-D3 with P cycling genes which indicate the presence of a probable mechanism for P mobilization.
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Marques Netto CGC, Palmeira DJ, Brondani PB, Andrade LH. Enzymatic reactions involving the heteroatoms from organic substrates. AN ACAD BRAS CIENC 2018; 90:943-992. [PMID: 29742205 DOI: 10.1590/0001-3765201820170741] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2017] [Accepted: 01/01/2018] [Indexed: 11/22/2022] Open
Abstract
Several enzymatic reactions of heteroatom-containing compounds have been explored as unnatural substrates. Considerable advances related to the search for efficient enzymatic systems able to support a broader substrate scope with high catalytic performance are described in the literature. These reports include mainly native and mutated enzymes and whole cells biocatalysis. Herein, we describe the historical background along with the progress of biocatalyzed reactions involving the heteroatom(S, Se, B, P and Si) from hetero-organic substrates.
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Affiliation(s)
| | - Dayvson J Palmeira
- Departamento de Química Fundamental, Universidade de São Paulo, São Paulo, SP, Brazil
| | - Patrícia B Brondani
- Departamento de Ciências Exatas e Educação, Universidade Federal de Santa Catarina, Blumenau, SC, Brazil
| | - Leandro H Andrade
- Departamento de Química Fundamental, Universidade de São Paulo, São Paulo, SP, Brazil
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3
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Zhu YC, Li Y, Zhang BC, Zhang FX, Yang YN, Wang XS. Palladium-Catalyzed Enantioselective C−H Olefination of Diaryl Sulfoxides through Parallel Kinetic Resolution and Desymmetrization. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201801146] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Yu-Chao Zhu
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Yan Li
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Bo-Chao Zhang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Feng-Xu Zhang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Yi-Nuo Yang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Xi-Sheng Wang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
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4
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Zhu YC, Li Y, Zhang BC, Zhang FX, Yang YN, Wang XS. Palladium-Catalyzed Enantioselective C−H Olefination of Diaryl Sulfoxides through Parallel Kinetic Resolution and Desymmetrization. Angew Chem Int Ed Engl 2018; 57:5129-5133. [DOI: 10.1002/anie.201801146] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2018] [Revised: 02/15/2018] [Indexed: 11/11/2022]
Affiliation(s)
- Yu-Chao Zhu
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Yan Li
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Bo-Chao Zhang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Feng-Xu Zhang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Yi-Nuo Yang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
| | - Xi-Sheng Wang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry; Center for Excellence in Molecular Synthesis of CAS; University of Science and Technology of China; Hefei Anhui 230026 China
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5
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Oliveira RL, Nijholt T, Shakeri M, de Jongh PE, Gebbink RJMK, de Jong KP. Encapsulation of chiral Fe(salen) in mesoporous silica structures for use as catalysts to produce optically active sulfoxides. Catal Sci Technol 2016. [DOI: 10.1039/c6cy00113k] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Solid catalysts which are heterogeneous at the macroscopic scale but homogeneous at the microscopic level were prepared by the encapsulation of Fe(salen) by a “ship in a bottle” approach.
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Affiliation(s)
- Rafael L. Oliveira
- Inorganic Chemistry and Catalysis
- Debye Institute for Nanomaterials Science
- Utrecht University
- Netherlands
- Institute of Chemistry
| | - Tom Nijholt
- Inorganic Chemistry and Catalysis
- Debye Institute for Nanomaterials Science
- Utrecht University
- Netherlands
| | - Mozaffar Shakeri
- Inorganic Chemistry and Catalysis
- Debye Institute for Nanomaterials Science
- Utrecht University
- Netherlands
| | - Petra E. de Jongh
- Inorganic Chemistry and Catalysis
- Debye Institute for Nanomaterials Science
- Utrecht University
- Netherlands
| | | | - Krijn P. de Jong
- Inorganic Chemistry and Catalysis
- Debye Institute for Nanomaterials Science
- Utrecht University
- Netherlands
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Stereoselective oxidation of sulfides to optically active sulfoxides with resting cells of Pseudomonas monteilii CCTCC M2013683. ACTA ACUST UNITED AC 2014. [DOI: 10.1016/j.molcatb.2014.05.004] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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7
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Mascotti ML, Palazzolo MA, Lewkowicz E, Kurina-Sanz M. Expanding the toolbox for enantioselective sulfide oxidations: Streptomyces strains as biocatalysts. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2013. [DOI: 10.1016/j.bcab.2013.08.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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8
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Affiliation(s)
- Graham E. O'Mahony
- a Department of Chemistry, Analytical and Biological Chemistry Research Facility , University College Cork , Cork , Ireland
| | - Alan Ford
- a Department of Chemistry, Analytical and Biological Chemistry Research Facility , University College Cork , Cork , Ireland
| | - Anita R. Maguire
- b Department of Chemistry and School of Pharmacy, Analytical and Biological Chemistry Research Facility , University College Cork , Cork , Ireland
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García-Urdiales E, Alfonso I, Gotor V. Update 1 of: Enantioselective Enzymatic Desymmetrizations in Organic Synthesis. Chem Rev 2011; 111:PR110-80. [DOI: 10.1021/cr100330u] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Eduardo García-Urdiales
- Departamento de Química
Orgánica e Inorgánica, Facultad de Química, Universidad
de Oviedo, Julián Clavería, 8, 33006 Oviedo, Spain,
and
| | - Ignacio Alfonso
- Departamento de Química Biológica
y Modelización Molecular, Instituto de Química Avanzada
de Cataluña (IQAC, CSIC), Jordi Girona, 18-26, 08034, Barcelona,
Spain
| | - Vicente Gotor
- Departamento de Química
Orgánica e Inorgánica, Facultad de Química, Universidad
de Oviedo, Julián Clavería, 8, 33006 Oviedo, Spain,
and
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Wojaczyńska E, Wojaczyński J. Enantioselective synthesis of sulfoxides: 2000-2009. Chem Rev 2010; 110:4303-56. [PMID: 20415478 DOI: 10.1021/cr900147h] [Citation(s) in RCA: 314] [Impact Index Per Article: 22.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Elzbieta Wojaczyńska
- Department of Organic Chemistry, Faculty of Chemistry, Wrocław University of Technology, Wybrzeze Wyspiańskiego 27, 50 370 Wrocław, Poland.
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Dong Y, Teng H, Qi S, Liu L, Wang H, Zhao Y, Xiu Z. Pathways and kinetics analysis of biotransformation of Dioscorea zingiberensis by Aspergillus oryzae. Biochem Eng J 2010. [DOI: 10.1016/j.bej.2010.07.011] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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12
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de Gonzalo G, Torres Pazmiño DE, Ottolina G, Fraaije MW, Carrea G. 4-Hydroxyacetophenone monooxygenase from Pseudomonas fluorescens ACB as an oxidative biocatalyst in the synthesis of optically active sulfoxides. ACTA ACUST UNITED AC 2006. [DOI: 10.1016/j.tetasy.2005.11.024] [Citation(s) in RCA: 71] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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13
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Adam W, Heckel F, Saha-Möller CR, Taupp M, Meyer JM, Schreier P. Opposite enantioselectivities of two phenotypically and genotypically similar strains of Pseudomonas frederiksbergensis in bacterial whole-cell sulfoxidation. Appl Environ Microbiol 2005; 71:2199-202. [PMID: 15812060 PMCID: PMC1082553 DOI: 10.1128/aem.71.4.2199-2202.2005] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Soil samples were screened to select microorganisms with the capability to oxidize organic sulfides into the corresponding sulfoxides with differential enantioselectivities. Several bacterial strains that preferentially produced the S-configured sulfoxide enantiomer were isolated. Surprisingly, one bacterial strain, genotypically and phenotypically characterized as Pseudomonas frederiksbergensis, selectively gave the R enantiomer. The finding that two apparently identical organisms displayed opposite enantioselectivities is novel for non-genetically modified organisms.
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Affiliation(s)
- Waldemar Adam
- Institute of Organic Chemistry, University of Würzburg, Am Hubland, D-97074 Würzburg, Germany
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García-Urdiales E, Alfonso I, Gotor V. Enantioselective enzymatic desymmetrizations in organic synthesis. Chem Rev 2005; 105:313-54. [PMID: 15720156 DOI: 10.1021/cr040640a] [Citation(s) in RCA: 393] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Eduardo García-Urdiales
- Departamento de Química Orgánica e Inorgánica, Facultad de Química, Universidad de Oviedo, Julián Clavería, 8, 33071 Oviedo, Spain
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