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Kee CW, Wong MW. Bicyclic Guanidine-Catalyzed Asymmetric Cycloaddition Reaction of Anthrones-Bifunctional Binding Modes and Origin of Stereoselectivity. J Org Chem 2020; 85:15139-15153. [PMID: 33175532 DOI: 10.1021/acs.joc.0c02008] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
We report a computational analysis of the [5,5] bicyclic guanidine-catalyzed asymmetric cycloaddition reaction of anthrones. Based on extensive conformational search of key intermediates and transition states on the potential energy surface and density functional theory calculations, we studied five plausible binding modes between the guanidine catalyst and substrates for this reaction. Our results indicate that the most favorable pathway is a stepwise conjugate addition-Aldol sequence via the dual hydrogen-bond binding mode. The predicted level of enantioselectivity is in good agreement with experimental values. Trends in variation of substrates and catalysts have also been reproduced by our calculations. Decomposition analysis revealed the significance of aromatic interactions in stabilizing the key enantioselectivity-determining transition state structures.
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Affiliation(s)
- Choon Wee Kee
- Process & Catalysis Research, Institute of Chemical and Engineering Sciences, 1 Pesek Road, Singapore 627899.,Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371
| | - Ming Wah Wong
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543
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2
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Curti C, Battistini L, Sartori A, Zanardi F. New Developments of the Principle of Vinylogy as Applied to π-Extended Enolate-Type Donor Systems. Chem Rev 2020; 120:2448-2612. [PMID: 32040305 PMCID: PMC7993750 DOI: 10.1021/acs.chemrev.9b00481] [Citation(s) in RCA: 102] [Impact Index Per Article: 25.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Indexed: 12/19/2022]
Abstract
The principle of vinylogy states that the electronic effects of a functional group in a molecule are possibly transmitted to a distal position through interposed conjugated multiple bonds. As an emblematic case, the nucleophilic character of a π-extended enolate-type chain system may be relayed from the legitimate α-site to the vinylogous γ, ε, ..., ω remote carbon sites along the chain, provided that suitable HOMO-raising strategies are adopted to transform the unsaturated pronucleophilic precursors into the reactive polyenolate species. On the other hand, when "unnatural" carbonyl ipso-sites are activated as nucleophiles (umpolung), vinylogation extends the nucleophilic character to "unnatural" β, δ, ... remote sites. Merging the principle of vinylogy with activation modalities and concepts such as iminium ion/enamine organocatalysis, NHC-organocatalysis, cooperative organo/metal catalysis, bifunctional organocatalysis, dicyanoalkylidene activation, and organocascade reactions represents an impressive step forward for all vinylogous transformations. This review article celebrates this evolutionary progress, by collecting, comparing, and critically describing the achievements made over the nine year period 2010-2018, in the generation of vinylogous enolate-type donor substrates and their use in chemical synthesis.
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Affiliation(s)
| | | | | | - Franca Zanardi
- Dipartimento di Scienze degli
Alimenti e del Farmaco, Università
di Parma, Parco Area delle Scienze 27A, 43124 Parma, Italy
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3
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Tikhonova TA, Lyssenko KA, Zavarzin IV, Volkova YA. Synthesis of Dibenzo[ d, f][1,3]Diazepines via Elemental Sulfur-Mediated Cyclocondensation of 2,2'-Biphenyldiamines with 2-Chloroacetic Acid Derivatives. J Org Chem 2019; 84:15817-15826. [PMID: 31729874 DOI: 10.1021/acs.joc.9b02002] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The three-component reaction of 2,2'-biphenyldiamines with 2-chloroacetic acid derivatives and elemental sulfur was developed for the practical synthesis of unknown 2-carboxamide-substituted dibenzo[d,f][1,3]diazepines. This protocol is distinguished by efficiency in water and good tolerance to functional groups and can be adapted to a large-scale synthesis. The chemoselective preparation of a variety of 2-S,N,O-substituted dibenzo[d,f][1,3]diazepines was accomplished using the developed method.
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Affiliation(s)
- Tatyana A Tikhonova
- N. D. Zelinsky Institute of Organic Chemistry , Russian Academy of Sciences , 47 Leninsky prosp ., Moscow 119991 , Russia
| | - Konstantin A Lyssenko
- Department of Chemistry , Lomonosov Moscow State University , Leninskie Gory 1-3 , Moscow 119991 , Russia.,Plekhanov Russian University of Economics , Stremyanny per. 36 , Moscow 117997 , Russia
| | - Igor V Zavarzin
- N. D. Zelinsky Institute of Organic Chemistry , Russian Academy of Sciences , 47 Leninsky prosp ., Moscow 119991 , Russia
| | - Yulia A Volkova
- N. D. Zelinsky Institute of Organic Chemistry , Russian Academy of Sciences , 47 Leninsky prosp ., Moscow 119991 , Russia
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4
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Chou H, Leow D, Tan C. Recent Advances in Chiral Guanidine‐Catalyzed Enantioselective Reactions. Chem Asian J 2019; 14:3803-3822. [DOI: 10.1002/asia.201901183] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2019] [Revised: 09/27/2019] [Indexed: 12/11/2022]
Affiliation(s)
- Hsiao‐Chieh Chou
- Division of Chemistry and Biological ChemistrySchool of Physical and Mathematical SciencesNanyang Technological University 21 Nanyang Link Singapore 637371 Singapore
| | - Dasheng Leow
- Division of Chemistry and Biological ChemistrySchool of Physical and Mathematical SciencesNanyang Technological University 21 Nanyang Link Singapore 637371 Singapore
| | - Choon‐Hong Tan
- Division of Chemistry and Biological ChemistrySchool of Physical and Mathematical SciencesNanyang Technological University 21 Nanyang Link Singapore 637371 Singapore
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5
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Sakai T, Hirashima SI, Yamashita Y, Arai R, Nakashima K, Yoshida A, Koseki Y, Miura T. Squaramide–Sulfonamide Organocatalyst for Asymmetric Direct Vinylogous Aldol Reactions. J Org Chem 2017; 82:4661-4667. [DOI: 10.1021/acs.joc.7b00287] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Takaaki Sakai
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Shin-ichi Hirashima
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Yoshifumi Yamashita
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Ryoga Arai
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Kosuke Nakashima
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Akihiro Yoshida
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Yuji Koseki
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
| | - Tsuyoshi Miura
- Tokyo University of Pharmacy, Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan
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6
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Berlinck RGS, Bertonha AF, Takaki M, Rodriguez JPG. The chemistry and biology of guanidine natural products. Nat Prod Rep 2017; 34:1264-1301. [DOI: 10.1039/c7np00037e] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
The chemistry and biology of natural guanidines isolated from microbial culture media, from marine invertebrates, as well as from terrestrial plants and animals, are reviewed.
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Affiliation(s)
| | - Ariane F. Bertonha
- Instituto de Química de São Carlos
- Universidade de São Paulo
- São Carlos
- Brazil
| | - Mirelle Takaki
- Instituto de Química de São Carlos
- Universidade de São Paulo
- São Carlos
- Brazil
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7
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Taimoory SM, Dudding T. An Evolving Insight into Chiral H-Bond Catalyzed Aza-Henry Reactions: A Cooperative Role for Noncovalent Attractive Interactions Unveiled by Density Functional Theory. J Org Chem 2016; 81:3286-95. [PMID: 27008440 DOI: 10.1021/acs.joc.6b00248] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The role of cooperative effects arising from noncovalent attractive interactions as a vital factor governing stereoinduction in chiral H-bond catalyzed aza-Henry reactions is reported. Supporting this finding were density functional theory (DFT) calculations which revealed a shape and size dependency existed between the catalyst and substrates that when matched lead to high enantioselectivity, as reflected by favorable activation parameters. Associated with optimal catalyst and substrate pairing were a closed catalytic binding pocket and a synclinal orientation of the substrates that reinforced favorable stereoelectronic effects and dispersive type forces. Meanwhile, unfavorable steric interactions were found to be a dominant effect controlling diastereoselection.
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Affiliation(s)
| | - Travis Dudding
- Brock University , 1812 Sir Isaac Brock Way, St. Catharines, ON, L2S 3A1 Canada
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8
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Jiang Y, Fu JH, Li TZ, Sha F, Wu XY. Enantioselective direct vinylogous aldol-cyclization cascade reaction between β,γ-unsaturated amides and o-quinones. Org Biomol Chem 2016; 14:6435-41. [DOI: 10.1039/c6ob00893c] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The first enantioselective vinylogous reaction with 1,2-dikeones as aldol donors has been developed to provide chiral spirocyclic dihydropyranones.
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Affiliation(s)
- Yu Jiang
- A Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Jun-Hao Fu
- A Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Tian-Ze Li
- A Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Feng Sha
- A Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Xin-Yan Wu
- A Key Laboratory for Advanced Materials and Institute of Fine Chemicals
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
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Development of Guanidine-Bisurea Bifunctional Organocatalysts with a Chiral Pyrrolidine Moiety and Application to α-Hydroxylation of Tetralone-Derived β-Keto Esters. Molecules 2015; 20:12590-8. [PMID: 26184142 PMCID: PMC6331824 DOI: 10.3390/molecules200712590] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Revised: 07/05/2015] [Accepted: 07/06/2015] [Indexed: 12/03/2022] Open
Abstract
Novel guanidine-bisurea bifunctional organocatalysts 5 bearing a chiral pyrrolidine moiety on guanidine were designed with the guidance of DFT calculations. The resulting organocatalysts 5 were examined for α-hydroxylation of tetralone-derived β-keto esters, and good selectivity was obtained with 5j bearing a methoxymethyl ether-containing chiral pyrrolidine moiety.
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Wezeman T, Hu Y, McMurtrie J, Bräse S, Masters KS. Synthesis of Non-Symmetrical and Atropisomeric Dibenzo[1,3]diazepines: Pd/CPhos-Catalysed Direct Arylation of Bis-Aryl Aminals. Aust J Chem 2015. [DOI: 10.1071/ch15465] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Pd/CPhos-catalysis provides direct arylation/cyclisation of methylene-linked bis-anilines to dibenzo[1,3]diazepines v, which are both non-(C2)-symmetrical and axially chiral. Synthesis of the direct arylation substrates commences with substitution of (N-acyl)anilines to methylene methyl sulfide derivatives, followed by halogenation/de-thiomethylation to N-(chloromethyl)anilines. These are substituted with a second aniline derivative, allowing modular preparation of (ortho-halo)aryl-aminal-linked arenes 4. The C–H functionalising direct arylation conditions were adapted from Fagnou and co-workers: substrates and potassium carbonate were heated in dimethylacetamide in the presence of palladium acetate and an electron-rich and sterically hindered biarylphosphine ligand, here CPhos 5. These conditions delivered the C1-(a)symmetric dibenzo[1,3]diazepine targets, which, due to torsion around the axis of the newly formed biaryl bond, are also intrinsically atropisomeric. The axially twisted scaffold is known to impart special properties to ligands/catalysts when the products are further converted into the corresponding seven-membered ring-containing N-heterocyclic carbenes (e.g. xii and xiv).
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