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Yamada H, Wu ZQ, Furusho Y, Yashima E. Thermodynamic and Kinetic Stabilities of Complementary Double Helices Utilizing Amidinium–Carboxylate Salt Bridges. J Am Chem Soc 2012; 134:9506-20. [DOI: 10.1021/ja303701d] [Citation(s) in RCA: 84] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Hidekazu Yamada
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Zong-Quan Wu
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Yoshio Furusho
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Eiji Yashima
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
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Iida H, Shimoyama M, Furusho Y, Yashima E. Double-Stranded Supramolecular Assembly through Salt Bridge Formation between Rigid and Flexible Amidine and Carboxylic Acid Strands. J Org Chem 2009; 75:417-23. [DOI: 10.1021/jo902158v] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Hiroki Iida
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Munenori Shimoyama
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Yoshio Furusho
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Eiji Yashima
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
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Lataifeh A, Bondy CR, Kraatz H. Ferrocene Conjugates Containing Diarginine and Aspartic Acid: Salt Bridge Interactions in Water. Eur J Inorg Chem 2009. [DOI: 10.1002/ejic.200900444] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Anas Lataifeh
- Department of Chemistry, University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada
| | - Chantelle R. Bondy
- Department of Chemistry, University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada
| | - Heinz‐Bernhard Kraatz
- Department of Chemistry, University of Western Ontario, 1151 Richmond Street, London, Ontario, N6A 5B7, Canada
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Casas-Solvas J, Ortiz-Salmerón E, Fernández I, García-Fuentes L, Santoyo-González F, Vargas-Berenguel A. Ferrocene-β-Cyclodextrin Conjugates: Synthesis, Supramolecular Behavior, and Use as Electrochemical Sensors. Chemistry 2009; 15:8146-62. [DOI: 10.1002/chem.200900593] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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N,N′-Dimethylbenzamidine and derivatives: Preparations, structures, and hydrogen bond networks therein. J Mol Struct 2008. [DOI: 10.1016/j.molstruc.2008.03.018] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Ito H, Furusho Y, Hasegawa T, Yashima E. Sequence- and chain-length-specific complementary double-helix formation. J Am Chem Soc 2008; 130:14008-15. [PMID: 18823119 DOI: 10.1021/ja806194e] [Citation(s) in RCA: 113] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The artificial sequential strands consisting of two, three, or four m-terphenyl groups joined by diacetylene linkers with complementary binding sites, either the chiral amidine (A) or achiral carboxyl (C) group, were synthesized in a stepwise manner. Using circular dichroism and (1)H NMR spectroscopies along with liquid chromatography, we showed that, when three dimeric molecular strands (AA, CC, and AC) or six trimeric molecular strands (AAA, CCC, AAC, CCA, ACA, and CAC) were mixed in solution, the complementary strands were sequence-specifically hybridized to form one-handed double-helical dimers AA.CC and (AC) 2 or trimers AAA.CCC, AAC.CCA, and ACA.CAC, respectively, through complementary amidinium-carboxylate salt bridges. Upon the addition of CCA to a mixture of AAA, AAC, and ACA, the AAC.CCA double helix was selectively formed and then isolated from the mixture by chromatography. Moreover, the homo-oligomer mixtures of amidine or carboxylic acid from the monomers to tetramers (A, AA, AAAA, C, CC, and CCCC) assembled with a precise chain length specificity to form A.C, AA.CC, and AAAA.CCCC, which were separated by chromatography.
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Affiliation(s)
- Hiroshi Ito
- Yashima Super-structured Helix Project, ERATO, Japan Science and Technology Agency (JST)
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Katagiri H, Tanaka Y, Furusho Y, Yashima E. Multicomponent Cylindrical Assemblies Driven by Amidinium–Carboxylate Salt-Bridge Formation. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200603921] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Katagiri H, Tanaka Y, Furusho Y, Yashima E. Multicomponent Cylindrical Assemblies Driven by Amidinium–Carboxylate Salt-Bridge Formation. Angew Chem Int Ed Engl 2007; 46:2435-9. [PMID: 17309084 DOI: 10.1002/anie.200603921] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Hiroshi Katagiri
- Yashima Super-structured Helix Project, Exploratory Research for Advanced Technology (ERATO), Japan Science and Technology Agency (JST), Creation Core Nagoya 101, 2266-22 Anagahora, Shimoshidami, Moriyama-ku, Nagoya 463-0003, Japan
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Tanaka Y, Katagiri H, Furusho Y, Yashima E. A Modular Strategy to Artificial Double Helices. Angew Chem Int Ed Engl 2005. [DOI: 10.1002/ange.200501028] [Citation(s) in RCA: 80] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Tanaka Y, Katagiri H, Furusho Y, Yashima E. A Modular Strategy to Artificial Double Helices. Angew Chem Int Ed Engl 2005; 44:3867-70. [PMID: 15900525 DOI: 10.1002/anie.200501028] [Citation(s) in RCA: 197] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yoshie Tanaka
- Yashima Super-structured Helix Project, Exploratory Research for Advanced Technology (ERATO), Japan Science and Technology Agency (JST), Creation Core Nagoya 101, 2266-22 Anagahora, Shimoshidami, Moriyama-ku, Nagoya 463-0003, Japan
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Bu J, Lilienthal ND, Woods JE, Nohrden CE, Hoang KT, Truong D, Smith DK. Electrochemically Controlled Hydrogen Bonding. Nitrobenzenes as Simple Redox-Dependent Receptors for Arylureas. J Am Chem Soc 2005; 127:6423-9. [PMID: 15853350 DOI: 10.1021/ja0462272] [Citation(s) in RCA: 72] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Reduction of nitrobenzene derivatives in the presence of arylureas in aprotic solvents results in large positive shifts in potential of the nitrobenzene(0/)(-) cyclic voltammetry wave with little change in wave shape. This behavior is indicative of reversible hydrogen bonding between nitrobenzene radical anions and arylureas. Computer fitting of the cyclic voltammetry of 4-nitroaniline, NA, plus 1,3-diphenylurea in DMF shows essentially no binding between urea and NA in the oxidized state (K(ox) < 1 M(-)(1)), but very strong binding in the reduced state (K(red) = 8 x 10(4) M(-)(1)), along with very rapid rates of hydrogen bond formation (k(f)'s approximately 10(8)-10(10) M(-)(1) s(-)(1)), making this system a fast on/off redox switch.
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Affiliation(s)
- Jingjing Bu
- Department of Chemistry and Biochemistry, San Diego State University, San Diego, California 92182-1030, USA
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Oms O, van der Lee A, Le Bideau J, Leclercq D. Redox-active pH-responsive molecules: ferrocenylphosphonic acid, ferrocenylmethylphosphonic acid and 1,1′-ferrocenylbisphosphonic acid. Structural determination of FcPO3Na2·5H2O. Dalton Trans 2005:1903-9. [PMID: 15909036 DOI: 10.1039/b503193a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The acidity constants of the reduced and oxidized species of ferrocenylphosphonic acids FcPO3H2, FcCH2PO3H2 and fc(PO3H2)2 (Fc = (eta5-C5H5)Fe(eta5-C5H4), fc = (eta5-C5H4)Fe(eta5-C5H4)) in water have been evaluated by potentiometric, 31P NMR, and electrochemical methods. The oxidized forms are more acidic than the reduced ones. The interaction between the redox centre and the charged oxygen atoms of the phosphonate group is shown to be electrostatic. The maximum oxidation shift DeltaE between the protonated and unprotonated species increases with the number of charges of the substrate and decreases with the increase of the distance between the ferrocenyl centre and the oxygen atoms of the phosphonate group. The structure of FcPO3Na2.5H2O is determined. The compound crystallizes in the monoclinic system. It is lamellar with an inorganic layer formed by tetramers Na4O14, the ferrocenyl groups occupying the interlamellar space.
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Affiliation(s)
- Olivier Oms
- Laboratoire de Chimie Moléculaire et Organisation du Solide, CNRS UMR 5637, Université Montpellier 2, Place Eugène Bataillon, Case courrier 007, 34095 Montpellier cedex 05, France
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Miyaji H, Gasser G, Green SJ, Molard Y, Strawbridge SM, Tucker JHR. Selective electrochemical sensing of acidic organic molecules via a novel guest-to-host proton transfer reaction. Chem Commun (Camb) 2005:5355-7. [PMID: 16244753 DOI: 10.1039/b510513g] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ferrocene-containing amidopyridine receptors bind carboxylic acids and the amino acid phenylalanine in acetonitrile via a novel proton transfer process that enables guests to be electrochemically sensed by positive shifts in the ferrocene-centred redox potentials.
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Affiliation(s)
- Hidekazu Miyaji
- Department of Chemistry, University of Exeter, Stocker Road, Exeter EX4 4QD, UK
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