1
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Manna U, Das G. An overview of anion coordination by hydroxyl, amine and amide based rigid and symmetric neutral dipodal receptors. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2020.213547] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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2
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Bolshchikov B, Volkov S, Sokolova D, Gorbunov A, Serebryannikova A, Gloriozov I, Cheshkov D, Bezzubov S, Chung WS, Kovalev V, Vatsouro I. Constructing bridged multifunctional calixarenes by intramolecular indole coupling. Org Chem Front 2019. [DOI: 10.1039/c9qo00859d] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
2,2′-Bisindole bridges can be easily created at (thia)calixarene cores providing the molecules with multiple functionalities for application in supramolecular chemistry.
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Affiliation(s)
- Boris Bolshchikov
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
| | - Sergey Volkov
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
| | - Daria Sokolova
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
| | - Alexander Gorbunov
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
| | | | - Igor Gloriozov
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
| | - Dmitry Cheshkov
- State Research Institute for Chemistry and Technology of Organoelement Compounds
- 105118 Moscow
- Russia
| | - Stanislav Bezzubov
- Kurnakov Institute of General and Inorganic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russia
| | - Wen-Sheng Chung
- Department of Applied Chemistry
- National Chiao Tung University
- Hsinchu 300
- Taiwan
| | - Vladimir Kovalev
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
| | - Ivan Vatsouro
- Department of Chemistry
- M. V. Lomonosov Moscow State University
- 119991 Moscow
- Russia
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3
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Janosik T, Rannug A, Rannug U, Wahlström N, Slätt J, Bergman J. Chemistry and Properties of Indolocarbazoles. Chem Rev 2018; 118:9058-9128. [PMID: 30191712 DOI: 10.1021/acs.chemrev.8b00186] [Citation(s) in RCA: 88] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The indolocarbazoles are an important class of nitrogen heterocycles which has evolved significantly in recent years, with numerous studies focusing on their diverse biological effects, or targeting new materials with potential applications in organic electronics. This review aims at providing a broad survey of the chemistry and properties of indolocarbazoles from an interdisciplinary point of view, with particular emphasis on practical synthetic aspects, as well as certain topics which have not been previously accounted for in detail, such as the occurrence, formation, biological activities, and metabolism of indolo[3,2- b]carbazoles. The literature of the past decade forms the basis of the text, which is further supplemented with older key references.
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Affiliation(s)
- Tomasz Janosik
- Research Institutes of Sweden , Bioscience and Materials, RISE Surface, Process and Formulation , SE-151 36 Södertälje , Sweden
| | - Agneta Rannug
- Institute of Environmental Medicine , Karolinska Institutet , SE-171 77 Stockholm , Sweden
| | - Ulf Rannug
- Department of Molecular Biosciences, The Wenner-Gren Institute , Stockholm University , SE-106 91 Stockholm , Sweden
| | | | - Johnny Slätt
- Department of Chemistry, Applied Physical Chemistry , KTH Royal Institute of Technology , SE-100 44 Stockholm , Sweden
| | - Jan Bergman
- Karolinska Institutet , Department of Biosciences and Nutrition , SE-141 83 Huddinge , Sweden
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4
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Portis B, Mirchi A, Emami Khansari M, Pramanik A, Johnson CR, Powell DR, Leszczynski J, Hossain MA. An Ideal C3-Symmetric Sulfate Complex: Molecular Recognition of Oxoanions by m-Nitrophenyl- and Pentafluorophenyl-Functionalized Hexaurea Receptors. ACS OMEGA 2017; 2:5840-5849. [PMID: 28983526 PMCID: PMC5623944 DOI: 10.1021/acsomega.7b01115] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2017] [Accepted: 08/28/2017] [Indexed: 06/07/2023]
Abstract
The anion-binding properties of two tripodal-based hexaureas appended with the m-nitrophenyl (1) and pentafluorophenyl (2) groups have been studied both experimentally and theoretically, showing strong affinities for sulfate over other inorganic oxoanions such as hydrogen sulfate, dihydrogen phosphate, bicarbonate, nitrate, and perchlorate. The structural analysis of the sulfate complex with 1 reveals that the receptor organizes all urea-binding sites toward the cavity at precise orientations around a tetrahedral sulfate anion to form an ideal C3-symmetric sulfate complex that is stabilized by 12 hydrogen-bonding interactions. The receptor and the encapsulated sulfate are located on the threefold axis passing through the bridgehead nitrogen of 1 and the sulfur atom of the anionic guest. The high-level density functional theory calculations support the crystallographic results, demonstrating that the C3-symmetric conformation of the sulfate complex is achieved due to the complementary NH···O between the receptor and sulfate.
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Affiliation(s)
- Bobby Portis
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
| | - Ali Mirchi
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
| | - Maryam Emami Khansari
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
| | - Avijit Pramanik
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
| | - Corey R. Johnson
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
| | - Douglas R. Powell
- Department
of Chemistry and Biochemistry, University
of Oklahoma, Norman, Oklahoma 73019, United
States
| | - Jerzy Leszczynski
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
| | - Md. Alamgir Hossain
- Department
of Chemistry and Biochemistry, Jackson State
University, Jackson, Mississippi 39217, United States
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5
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Brown A, Lang T, Mullen KM, Beer PD. Active metal template synthesis of a neutral indolocarbazole-containing [2]rotaxane host system for selective oxoanion recognition. Org Biomol Chem 2017; 15:4587-4594. [DOI: 10.1039/c7ob01040k] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A CuAAC active metal template approach is used to prepare a new neutral indolocarbazole-containing [2]rotaxane anion host system which exhibits a rare interlocked host selectivity for oxoanions over halides.
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Affiliation(s)
- Asha Brown
- Chemistry Research Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Thomas Lang
- Chemistry Research Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Kathleen M. Mullen
- Chemistry Research Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Paul D. Beer
- Chemistry Research Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
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6
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Haque SA, Saeed MA, Jahan A, Wang J, Leszczynski J, Hossain MA. Experimental and Theoretical Aspects of Anion Complexes with a Thiophene-Based Cryptand. COMMENT INORG CHEM 2016; 36:305-326. [PMID: 28216803 PMCID: PMC5310392 DOI: 10.1080/02603594.2016.1171216] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
Selective recognition of anions has received a tremendous attention in recent years because of their significant importance in biology and environment. This article highlights our recent research on a thiophene-based azacryptand that has been shown to effectively bind anions including iodide, bromide, chloride, nitrate and sulfate. Structural studies indicate that the ligand forms inclusion complexes with chloride and iodide. On the other hand, it forms cleft-like complexes with nitrate and sulfate, where three anions are bound between the cyclic arms. The ligand binds each anion with a 1:1 binding mode in water, exhibiting strong selectivity for sulfate; which is further supported by ESI-MS and DFT calculations.
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Affiliation(s)
- Syed A Haque
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217
| | - Musabbir A Saeed
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217
| | - Afsana Jahan
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217
| | - Jing Wang
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217
| | - Jerzy Leszczynski
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217
| | - Md Alamgir Hossain
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217
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7
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Khansari ME, Johnson CR, Basaran I, Nafis A, Wang J, Leszczynski J, Hossain MA. Synthesis and anion binding studies of tris(3-aminopropyl)amine-based tripodal urea and thiourea receptors: Proton transfer-induced selectivity for hydrogen sulfate over sulfate. RSC Adv 2015; 5:17606-17614. [PMID: 28184300 PMCID: PMC5295472 DOI: 10.1039/c5ra01315a] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Abstract
Tris(3-aminopropyl)amine-based tripodal urea and thiourea receptors, tris([(4-cyanophenyl)amino]propyl)urea (L1) and tris([(4-cyanophenyl)amino]propyl)thiourea (L2), have been synthesized and their anion binding properties have been investigated for halides and oxoanions. As investigated by 1H NMR titrations, each receptor binds an anion with a 1:1 stoichiometry via hydrogen-bonding interactions (NH⋯anion), showing the binding trend in the order of F- > H2PO4- > HCO3- > HSO4- > CH3COO- > SO42- > Cl- > Br- > I in DMSO-d6 . The interactions of the receptors were further studied by 2D NOESY, showing the loss of NOESY contacts of two NH resonances for the complexes of F-, H2PO4-, HCO3-, HSO4- or CH3COO- due to the strong NH⋯anion interactions. The observed higher binding affinity for HSO4- than SO42- is attributed to the proton transfer from HSO4- to the central nitrogen of L1 or L2 which was also supported by the DFT calculations, leading to the secondary acid-base interactions. The thiourea receptor L2 has a general trend to show a higher affinity for an anion as compared to the urea receptor L1 for the corresponding anion in DMSO-d6 . In addition, the compound L2 has been exploited for its extraction properties for fluoride in water using a liquid-liquid extraction technique, and the results indicate that the receptor effectively extracts fluoride from water showing ca. 99% efficiency (based on L2).
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Affiliation(s)
- Maryam Emami Khansari
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA
| | - Corey R Johnson
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA
| | - Ismet Basaran
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA; Department of Chemistry, Balikesir University, 10145, Balikesir, Turkey
| | - Aemal Nafis
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA
| | - Jing Wang
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA
| | - Jerzy Leszczynski
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA
| | - Md Alamgir Hossain
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39217, USA
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8
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Areti S, Khedkar JK, Chilukula R, Rao CP. Thiourea linked peracetylated glucopyranosyl–anthraquinone conjugate as reversible ON–OFF receptor for fluoride in acetonitrile. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.08.008] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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9
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Gogoi A, Das G. Electronic substitution effects on anion coordination of a tripodal thiourea receptor: evidences of deprotonation of oxy-anions in solid and solution. Supramol Chem 2013. [DOI: 10.1080/10610278.2013.808343] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Abhijit Gogoi
- Department of Chemistry, Indian Institute of Technology, GuwahatiAssam781039, India
| | - Gopal Das
- Department of Chemistry, Indian Institute of Technology, GuwahatiAssam781039, India
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10
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Wang C, Sperry J. Total syntheses of the dipyrrolobenzoquinone (+)-terreusinone enabled by an evaluation of 4-methylpent-1-yn-3-ols in the Larock indole synthesis. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.04.025] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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11
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Bao XP, Zheng PC, Liu Y, Tan Z, Zhou YH, Song BA. Salicylaldehyde-indole-2-acylhydrazone: a simple, colorimetric and absorption ratiometric chemosensor for acetate ion. Supramol Chem 2013. [DOI: 10.1080/10610278.2012.758368] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Xiao-ping Bao
- a Center for Research and Development of Fine Chemicals, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University , Guiyang , 550025 , P. R. China
| | - Peng-cheng Zheng
- a Center for Research and Development of Fine Chemicals, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University , Guiyang , 550025 , P. R. China
| | - Yong Liu
- a Center for Research and Development of Fine Chemicals, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University , Guiyang , 550025 , P. R. China
| | - Zan Tan
- a Center for Research and Development of Fine Chemicals, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University , Guiyang , 550025 , P. R. China
| | - Yu-hui Zhou
- b Department of Chemistry , Guizhou University , Guiyang , P. R. China
| | - Bao-an Song
- a Center for Research and Development of Fine Chemicals, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University , Guiyang , 550025 , P. R. China
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12
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Suk JM, Kim DA, Jeong KS. Helicity Control of an Indolocarbazole Foldamer by Chiral Organic Anions. Org Lett 2012; 14:5018-21. [DOI: 10.1021/ol3022148] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jae-min Suk
- Department of Chemistry, Yonsei University, Seoul 120-749, South Korea
| | - Dan A Kim
- Department of Chemistry, Yonsei University, Seoul 120-749, South Korea
| | - Kyu-Sung Jeong
- Department of Chemistry, Yonsei University, Seoul 120-749, South Korea
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13
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14
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Pramanik A, Powell DR, Wong BM, Hossain MA. Spectroscopic, structural, and theoretical studies of halide complexes with a urea-based tripodal receptor. Inorg Chem 2012; 51:4274-84. [PMID: 22409384 PMCID: PMC3399518 DOI: 10.1021/ic202747q] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
A urea-based tripodal receptor L substituted with p-cyanophenyl groups has been studied for halide anions using (1)H NMR spectroscopy, density functional theory (DFT) calculations, and X-ray crystallography. The (1)H NMR titration studies suggest that the receptor forms a 1:1 complex with an anion, showing a binding trend in the order of fluoride > chloride > bromide > iodide. The interaction of a fluoride anion with the receptor was further confirmed by 2D NOESY and (19)F NMR spectroscopy in DMSO-d(6). DFT calculations indicate that the internal halide anion is held by six NH···X interactions with L, showing the highest binding energy for the fluoride complex. Structural characterization of the chloride, bromide, and silicon hexafluoride complexes of [LH(+)] reveals that the anion is externally located via hydrogen bonding interactions. For the bromide or chloride complex, two anions are bridged with two receptors to form a centrosymmetric dimer, while for the silicon hexafluoride complex, the anion is located within a cage formed by six ligands and two water molecules.
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Affiliation(s)
- Avijit Pramanik
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39212
| | - Douglas R. Powell
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, OK 73019
| | - Bryan M. Wong
- Materials Chemistry Department, Sandia National Laboratories, Livermore, CA 94551
| | - Md. Alamgir Hossain
- Department of Chemistry and Biochemistry, Jackson State University, Jackson, MS 39212
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15
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Gale PA, Haynes CJE. Anion Receptors Containing Heterocyclic Rings. Supramol Chem 2012. [DOI: 10.1002/9780470661345.smc062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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16
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Lee SK, Han Y, Choi Y, Kang J. A new dihydrogen phosphate selective anion receptor utilizing carbazole and indole. J INCL PHENOM MACRO 2012. [DOI: 10.1007/s10847-011-0098-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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17
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Wu HH, Sun YL, Wan CF, Yang ST, Chen SJ, Hu CH, Wu AT. Highly selective and sensitive fluorescent chemosensor for Hg2+ in aqueous solution. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2011.12.110] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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18
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Wei W, Guo Y, Xu J, Shao S. Spectroscopic properties of the receptors based on 2- and 3-linked tri(indolyl)methanes for anion binding. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2010; 77:620-624. [PMID: 20643574 DOI: 10.1016/j.saa.2010.06.036] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2010] [Revised: 06/01/2010] [Accepted: 06/21/2010] [Indexed: 05/29/2023]
Abstract
The anion binding properties of two title tri(indolyl)methane compounds have been evaluated by using UV-vis absorption and fluorescence spectroscopy. Different from 3-linked receptor which exhibited faint even no obvious spectral response to anions, 2-linked receptor can bind F(-), AcO(-) and H(2)PO(4)(-), with the bathochromic shifts of the UV absorption and fluorescence quenching. This selectivity will be attributed to suitable steric array of NH binding sites of 2-linked receptor, which helps to form multiple hydrogen bonding interactions with anions.
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Affiliation(s)
- Wei Wei
- Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, People's Republic of China
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19
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Carroll CN, Naleway JJ, Haley MM, Johnson DW. Arylethynyl receptors for neutral molecules and anions: emerging applications in cellular imaging. Chem Soc Rev 2010; 39:3875-88. [PMID: 20820467 PMCID: PMC3062433 DOI: 10.1039/b926231h] [Citation(s) in RCA: 74] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This critical review will focus on the application of shape-persistent receptors for anions that derive their rigidity and optoelectronic properties from the inclusion of arylethynyl linkages. It will highlight a few of the design strategies involved in engineering selective and sensitive fluorescent probes and how arylacetylenes can offer a design pathway to some of the more desirable properties of a selective sensor. Additionally, knowledge gained in the study of these receptors in organic media often leads to improved receptor design and the production of chromogenic and fluorogenic probes capable of detecting specific substrates among the multitude of ions present in biological systems. In this ocean of potential targets exists a large number of geometrically distinct anions, which present their own problems to the design of receptors with complementary binding for each preferred coordination geometry. Our interest in targeting charged substrates, specifically how previous work on receptors for cations or neutral guests can be adapted to anions, will be addressed. Additionally, we will focus on the design and development of supramolecular arylethynyl systems, their shape-persistence and fluorogenic or chromogenic optoelectronic responses to complexation. We will also examine briefly how the "chemistry in the cuvet" translates into biological media (125 references).
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Affiliation(s)
- Calden N. Carroll
- Department of Chemistry and the Materials Science Institute, 1253 University of Oregon, Eugene, Oregon 97403-1253 USA
- The Oregon Nanoscience and Microtechnologies Institute (ONAMI), P.O. Box 2041, Corvallis, OR 97339 USA url: http://onami.us/
| | - John J. Naleway
- The Oregon Nanoscience and Microtechnologies Institute (ONAMI), P.O. Box 2041, Corvallis, OR 97339 USA url: http://onami.us/
- Marker Gene Technologies, Inc., University of Oregon Riverfront Research Park, 1850 Millrace Drive, Eugene, OR 97403 USA
| | - Michael M. Haley
- Department of Chemistry and the Materials Science Institute, 1253 University of Oregon, Eugene, Oregon 97403-1253 USA
- The Oregon Nanoscience and Microtechnologies Institute (ONAMI), P.O. Box 2041, Corvallis, OR 97339 USA url: http://onami.us/
| | - Darren W. Johnson
- Department of Chemistry and the Materials Science Institute, 1253 University of Oregon, Eugene, Oregon 97403-1253 USA
- The Oregon Nanoscience and Microtechnologies Institute (ONAMI), P.O. Box 2041, Corvallis, OR 97339 USA url: http://onami.us/
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20
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Abstract
A new set of diamide receptors containing anthracene and carbazole bridging subunits and either pyrrole or phenyl substituents were synthesized. The four systems produced in this way were shown to bind representative anions in DMSO-d(6) solution and in the solid state. A higher relative affinity for two test oxoanions, namely dihydrogen phosphate and benzoate, over chloride anion was seen in solution, with the anions in question being studied in the form of their respective tetrabutylammonium salts. However, the specifics of the anion recognition process were seen to depend on structure, with the pyrrole-containing systems displaying higher relative affinities than their corresponding phenyl-containing congeners, and the carbazole receptors proving more effective than the anthracene analogues. Such observations provide support for the notion that both the carbazole NH and the pyrrolic NH protons play an important role in stabilizing the receptor-bound anions in solution. Structural analyses of several anion complexes of the diamidopyrrole carbazole receptor reveal that this is not necessarily the case in the solid state; specifically, the pyrrole NH protons are seen to interact with the amide oxygen of another molecule. The net result is an extended a one-dimensional coordinaton polymer.
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Affiliation(s)
- Dustin E. Gross
- Department of Chemistry and Biochemistry, Institute for Cellular and Molecular Biology, 1 University Station-A5300, The University of Texas, Austin, Texas 78712-0165, USA
| | - Vinay Mikkilineni
- Department of Chemistry and Biochemistry, Institute for Cellular and Molecular Biology, 1 University Station-A5300, The University of Texas, Austin, Texas 78712-0165, USA
| | - Vincent M. Lynch
- Department of Chemistry and Biochemistry, Institute for Cellular and Molecular Biology, 1 University Station-A5300, The University of Texas, Austin, Texas 78712-0165, USA
| | - Jonathan L. Sessler
- Department of Chemistry and Biochemistry, Institute for Cellular and Molecular Biology, 1 University Station-A5300, The University of Texas, Austin, Texas 78712-0165, USA
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21
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Pyrrole-Based Anion Sensors, Part I: Colorimetric Sensors. TOPICS IN HETEROCYCLIC CHEMISTRY 2010. [DOI: 10.1007/7081_2010_40] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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22
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Curiel D, Más-Montoya M, Sánchez G, Orenes RA, Molina P, Tárraga A. A new building block for anion supramolecular chemistry. Study of carbazolocarbazole as anion receptor. Org Biomol Chem 2010; 8:4811-4. [DOI: 10.1039/c0ob00522c] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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23
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Biindolyls. ADVANCES IN HETEROCYCLIC CHEMISTRY 2010. [DOI: 10.1016/s0065-2725(10)01003-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
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24
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Juwarker H, Suk JM, Jeong KS. Indoles and Related Heterocycles. TOPICS IN HETEROCYCLIC CHEMISTRY 2010. [DOI: 10.1007/7081_2010_31] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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25
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Lee CH, Yoon H, Jang WD. Biindole-Bridged Porphyrin Dimer as Allosteric Molecular Tweezers. Chemistry 2009; 15:9972-6. [DOI: 10.1002/chem.200901988] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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26
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Makuc D, Triyanti, Albrecht M, Plavec J, Rissanen K, Valkonen A, Schalley CA. The Halide Binding Behavior of 2-Carbamoyl-7-ureido-1H-indoles: Conformational Aspects. European J Org Chem 2009. [DOI: 10.1002/ejoc.200900721] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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27
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Capelli L, Manini P, Pezzella A, Napolitano A, d’Ischia M. Efficient Synthesis of 5,6-Dihydroxyindole Dimers, Key Eumelanin Building Blocks, by a Unified o-Ethynylaniline-Based Strategy for the Construction of 2-Linked Biindolyl Scaffolds. J Org Chem 2009; 74:7191-4. [DOI: 10.1021/jo901259s] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Luigia Capelli
- Department of Organic Chemistry and Biochemistry, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 4, I-80126 Naples, Italy
| | - Paola Manini
- Department of Organic Chemistry and Biochemistry, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 4, I-80126 Naples, Italy
| | - Alessandro Pezzella
- Department of Organic Chemistry and Biochemistry, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 4, I-80126 Naples, Italy
| | - Alessandra Napolitano
- Department of Organic Chemistry and Biochemistry, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 4, I-80126 Naples, Italy
| | - Marco d’Ischia
- Department of Organic Chemistry and Biochemistry, University of Naples Federico II, Complesso Universitario Monte S. Angelo, via Cintia 4, I-80126 Naples, Italy
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Brown A, Mullen KM, Ryu J, Chmielewski MJ, Santos SM, Felix V, Thompson AL, Warren JE, Pascu SI, Beer PD. Interlocked Host Anion Recognition by an Indolocarbazole-Containing [2]Rotaxane. J Am Chem Soc 2009; 131:4937-52. [DOI: 10.1021/ja809905x] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Asha Brown
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Kathleen M. Mullen
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Jay Ryu
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Michał J. Chmielewski
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Sérgio M. Santos
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Vitor Felix
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Amber L. Thompson
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - John E. Warren
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Sofia I. Pascu
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
| | - Paul D. Beer
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford, OX1 3TA U.K., Departamento de Química, CICECO and Secção Autónoma de Ciências da Saúde, Universidade de Aveiro, 3810-193 Aveiro, Portugal, Synchrotron Radiation Source, Daresbury Laboratory, Warrington, WA4 4AD U.K., and Department of Chemistry, University of Bath, Bath, BA2 7AY U.K
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Makuc D, Lenarčič M, Bates GW, Gale PA, Plavec J. Anion-induced conformational changes in 2,7-disubstituted indole-based receptors. Org Biomol Chem 2009; 7:3505-11. [DOI: 10.1039/b908947k] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Curiel D, Espinosa A, Más-Montoya M, Sánchez G, Tárraga A, Molina P. A new open benzodipyrrole-based chemosensor for hydrogenpyrophosphate anion in aqueous environment. Chem Commun (Camb) 2009:7539-41. [DOI: 10.1039/b913345c] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Mullen KM, Beer PD. Sulfate anion templation of macrocycles, capsules, interpenetrated and interlocked structures. Chem Soc Rev 2009; 38:1701-13. [DOI: 10.1039/b806041j] [Citation(s) in RCA: 197] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Kuhn P, Alix A, Kumarraja M, Louis B, Pale P, Sommer J. Copper-Zeolites as Catalysts for the Coupling of Terminal Alkynes: An Efficient Synthesis of Diynes. European J Org Chem 2009. [DOI: 10.1002/ejoc.200800848] [Citation(s) in RCA: 86] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Zhao L, Mullen KM, Chmielewski MJ, Brown A, Bampos N, Beer PD, Davis JJ. Anion templated assembly of an indolocarbazole containing pseudorotaxane on beads and silica nanoparticles. NEW J CHEM 2009. [DOI: 10.1039/b818854h] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Janosik T, Wahlström N, Bergman J. Recent progress in the chemistry and applications of indolocarbazoles. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.06.101] [Citation(s) in RCA: 102] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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Yu JO, Scott Browning C, Farrar DH. Tris-2-(3-methylindolyl)phosphine as an anion receptor. Chem Commun (Camb) 2008:1020-2. [DOI: 10.1039/b714889e] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Gale PA. Synthetic indole, carbazole, biindole and indolocarbazole-based receptors: applications in anion complexation and sensing. Chem Commun (Camb) 2008:4525-40. [PMID: 18815678 DOI: 10.1039/b809508f] [Citation(s) in RCA: 224] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- Philip A Gale
- School of Chemistry, University of Southampton, Southampton, UK SO17 1BJ.
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Wang T, Bai Y, Ma L, Yan XP. Synthesis and characterization of indolocarbazole-quinoxalines with flat rigid structure for sensing fluoride and acetate anions. Org Biomol Chem 2008; 6:1751-5. [DOI: 10.1039/b801447g] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Caltagirone C, Gale PA, Hiscock JR, Brooks SJ, Hursthouse MB, Light ME. 1,3-Diindolylureas: high affinity dihydrogen phosphate receptors. Chem Commun (Camb) 2008:3007-9. [DOI: 10.1039/b806238b] [Citation(s) in RCA: 121] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Gale PA, García-Garrido SE, Garric J. Anion receptors based on organic frameworks: highlights from 2005 and 2006. Chem Soc Rev 2008; 37:151-90. [DOI: 10.1039/b715825d] [Citation(s) in RCA: 715] [Impact Index Per Article: 44.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Abstract
Indole-based synthetic receptors which bind anions by multiple hydrogen bonds in organic solvents have been prepared. The biindole scaffold bearing two good hydrogen bond donors of indole NHs has been used as a molecular building block to construct the receptors. Incorporation of more hydrogen bond donors or acceptors increases the binding strength and selectivity toward a specific ion. Two macrocycles having different sizes of the internal cavities have been also synthesized, and their binding properties have been compared. Two macrocycles display distinct binding modes with polyatomic anions such as azide, as unequivocally proven by X-ray crystal structures. Finally, a series of oligoindoles containing four, six, and eight indoles have been prepared by Sonogashira reactions. The oligoindoles fold into helical structures upon binding with chloride. The binding affinities of the oligoindoles with chloride increase with increasing of the chain length, which provides an additional evidence for helical folding of the complexes.
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Chae MK, Lee JI, Kim NK, Jeong KS. An ion pair receptor showing remarkable enhancement of anion-binding strengths in the presence of alkali metal cations. Tetrahedron Lett 2007. [DOI: 10.1016/j.tetlet.2007.07.115] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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42
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Lee JY, Lee MH, Jeong KS. Synthesis and Binding Properties of Anion Receptors Containing Multiple Hydrogen Bond Donors. Supramol Chem 2007. [DOI: 10.1080/10610270701294472] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Ji-Yeon Lee
- a Department of Chemistry , Center for Bioactive Molecular Hybrids, Yonsei University , Seoul, 120-749, South Korea
| | - Min-Hee Lee
- a Department of Chemistry , Center for Bioactive Molecular Hybrids, Yonsei University , Seoul, 120-749, South Korea
| | - Kyu-Sung Jeong
- a Department of Chemistry , Center for Bioactive Molecular Hybrids, Yonsei University , Seoul, 120-749, South Korea
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43
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Kim NK, Chang KJ, Moon D, Lah MS, Jeong KS. Two distinct anion-binding modes and their relative stabilities. Chem Commun (Camb) 2007:3401-3. [DOI: 10.1039/b707032b] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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44
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Bates GW, Gale PA, Light ME. Isophthalamides and 2,6-dicarboxamidopyridines with pendant indole groups: a ‘twisted’ binding mode for selective fluoride recognition. Chem Commun (Camb) 2007:2121-3. [PMID: 17520109 DOI: 10.1039/b703905k] [Citation(s) in RCA: 121] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two cleft-like anion receptors have been synthesised that contain indole hydrogen-bond donors and show fluoride selectively in a DMSO-water solution with crystallographic studies showing a 'twisted' binding mode for fluoride in the solid state.
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Affiliation(s)
- Gareth W Bates
- School of Chemistry, University of Southampton, Southampton, UKSO17 1BJ
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