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Singh K, Behera SS, Tyagi R, Tiwari G, Sagar R. Metal free synthesis of 2,3-dideoxy-α, β-unsaturated carbohydrate enals (Perlin aldehydes). Carbohydr Res 2023; 531:108890. [PMID: 37406515 DOI: 10.1016/j.carres.2023.108890] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 06/16/2023] [Accepted: 06/27/2023] [Indexed: 07/07/2023]
Abstract
A metal free synthesis of enantiopure 2,3-dideoxy-α, β-unsaturated carbohydrate enals (Perlin aldehydes), in CH3CN-0.02 N H2SO4 in water (1:1, v/v) with 0.5 equivalent additives (4-hydroxy-6-methyl-2-pyrone or 4-amino coumarin), has been reported. This efficient protocol works well for the acetylated glycals (glucal, galactal and arabinal) and afforded Perlin aldehydes and hemiacetals in acceptable to good yields. Whereas, benzylated glycals furnished respective Perlin aldehydes, hemiacetals and the 2-deoxy derivatives, under similar reaction conditions. The products yields were significantly reduced when the additives were removed from the reaction mixture, indicating that they constitute an essential component of this approach. Further the use of 0.02 N H2SO4 in water: acetonitrile (1:1, v/v) solvent system is essential for the formation of Perlin aldehydes. The similar reactions under neutral reaction conditions (CH3CN:H2O, 1:1, v/v) with additives, afforded the hemiacetals as major product. This methodology is a metal free approach to Perlin aldehyde synthesis and therefore having additional benefit of its use in preparation of bioactive drug molecules, where metal toxicity is the major concern.
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Affiliation(s)
- Kavita Singh
- Glycochemistry Laboratory, School of Physical Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Sourav Sagar Behera
- Glycochemistry Laboratory, School of Physical Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Rajdeep Tyagi
- Glycochemistry Laboratory, School of Physical Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Ghanshyam Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221005, India
| | - Ram Sagar
- Glycochemistry Laboratory, School of Physical Sciences, Jawaharlal Nehru University, New Delhi, 110067, India; Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, 221005, India.
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2
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Čonková M, Martinková M, Gonda J, Jacková D, Pilátová MB, Kupka D, Jáger D. Stereoselective synthesis and antiproliferative activity of the isomeric sphinganine analogues. Carbohydr Res 2019; 472:76-85. [PMID: 30529492 DOI: 10.1016/j.carres.2018.09.008] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Revised: 09/27/2018] [Accepted: 09/27/2018] [Indexed: 12/21/2022]
Abstract
A flexible synthetic approach to biologically active sphingoid base-like compounds with a 3-amino-1,2-diol framework was achieved through a [3,3]-sigmatropic rearrangement and late stage olefin cross-metathesis as the key transformations. The stereochemistry of the newly created stereogenic centre was assigned via a single crystal X-ray analysis of the (4S,5R)-5-(hydroxymethyl)-4-vinyloxazolidine-2-thione. In order to rationalise the observed stereoselectivity of the aza-Claisen rearrangement, DFT calculations were carried out. The targeted isomeric sphingoid bases were screened in vitro for anticancer activity on a panel of seven human malignant cell lines. Cell viability experiments revealed that C17-homologues are more active than their C12 congeners.
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Affiliation(s)
- Miroslava Čonková
- Institute of Chemical Sciences, Department of Organic Chemistry, P.J. Šafárik University, Moyzesova 11, 040 01, Košice, Slovak Republic
| | - Miroslava Martinková
- Institute of Chemical Sciences, Department of Organic Chemistry, P.J. Šafárik University, Moyzesova 11, 040 01, Košice, Slovak Republic.
| | - Jozef Gonda
- Institute of Chemical Sciences, Department of Organic Chemistry, P.J. Šafárik University, Moyzesova 11, 040 01, Košice, Slovak Republic
| | - Dominika Jacková
- Institute of Chemical Sciences, Department of Organic Chemistry, P.J. Šafárik University, Moyzesova 11, 040 01, Košice, Slovak Republic
| | - Martina Bago Pilátová
- Institute of Pharmacology, Faculty of Medicine, P.J. Šafárik University, SNP 1, 040 66, Košice, Slovak Republic
| | - Daniel Kupka
- Institute of Geotechnics, Slovak Academy of Sciences, Watsonova 45, 040 01, Košice, Slovak Republic
| | - Dávid Jáger
- Institute of Geotechnics, Slovak Academy of Sciences, Watsonova 45, 040 01, Košice, Slovak Republic
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3
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Hunter CD, Guo T, Daskhan G, Richards MR, Cairo CW. Synthetic Strategies for Modified Glycosphingolipids and Their Design as Probes. Chem Rev 2018; 118:8188-8241. [DOI: 10.1021/acs.chemrev.8b00070] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Carmanah D. Hunter
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
| | - Tianlin Guo
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
| | - Gour Daskhan
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
| | - Michele R. Richards
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
| | - Christopher W. Cairo
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada
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4
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Garg Y, Kaur R, Kumar Pandey S. Organocatalytic Asymmetric Tandem α-Aminooxylation-Henry Reactions for the Synthesis of 1,2-Diols: Total Synthesis of (-)-l-threo-Sphinganine. European J Org Chem 2017. [DOI: 10.1002/ejoc.201701289] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Yuvraj Garg
- School of Chemistry and Biochemistry; Thapar University; -147001 Patiala India
| | - Ramandeep Kaur
- School of Chemistry and Biochemistry; Thapar University; -147001 Patiala India
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5
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Martinková M, Gonda J, Jacková D. Simple marine 1-deoxysphingoid bases: biological activity and syntheses. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.tetasy.2016.10.009] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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6
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Das P, Kundooru S, Shaw AK. ‘Chiron’ approach to stereoselective synthesis of sphinganine and unnatural safingol, an antineoplastic and antipsoriatic agent. RSC Adv 2016. [DOI: 10.1039/c5ra27342k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Highly stereoselective total syntheses of sphinganine 1 and antineoplastic and antipsoriatic drug safingol 17 have been demonstrated.
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Affiliation(s)
- Pintu Das
- Division of Medicinal and Process Chemistry
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Somireddy Kundooru
- Division of Medicinal and Process Chemistry
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Arun K. Shaw
- Division of Medicinal and Process Chemistry
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
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7
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Mukherjee M, Zhou Y, Gupta AK, Guan Y, Wulff WD. A General Synthesis of Sphinganines through Multicomponent Catalytic Asymmetric Aziridination. European J Org Chem 2014. [DOI: 10.1002/ejoc.201301766] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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8
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Qin D, Yu W, Zhou J, Zhang Y, Ruan Y, Zhou Z, Chen H. syn
‐ and Enantioselective Henry Reactions of Aliphatic Aldehydes and Application to the Synthesis of Safingol. Chemistry 2013; 19:16541-4. [DOI: 10.1002/chem.201303650] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2013] [Indexed: 11/08/2022]
Affiliation(s)
- Dan‐Dan Qin
- Department of Chemistry and State Key Laboratory of Physical Chemistry for Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005 (P. R. China), Fax: (+86) 592‐2185192
| | - Wen Yu
- Department of Chemistry and State Key Laboratory of Physical Chemistry for Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005 (P. R. China), Fax: (+86) 592‐2185192
| | - Jie‐Dan Zhou
- Department of Chemistry and State Key Laboratory of Physical Chemistry for Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005 (P. R. China), Fax: (+86) 592‐2185192
| | - Yan‐Cheng Zhang
- Nantong Huafeng Chemical Co. Ltd., Nantong, Jiangsu, 226531 (P. R. China)
| | - Yuan‐Ping Ruan
- Department of Chemistry and State Key Laboratory of Physical Chemistry for Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005 (P. R. China), Fax: (+86) 592‐2185192
| | - Zhao‐Hui Zhou
- Department of Chemistry and State Key Laboratory of Physical Chemistry for Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005 (P. R. China), Fax: (+86) 592‐2185192
| | - Hong‐Bin Chen
- Department of Chemistry and State Key Laboratory of Physical Chemistry for Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005 (P. R. China), Fax: (+86) 592‐2185192
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9
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Calder ED, Zaed AM, Sutherland A. Preparation of anti-vicinal amino alcohols: asymmetric synthesis of D-erythro-sphinganine, (+)-spisulosine, and D-ribo-phytosphingosine. J Org Chem 2013; 78:7223-33. [PMID: 23795558 PMCID: PMC3719175 DOI: 10.1021/jo401211j] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2013] [Indexed: 02/05/2023]
Abstract
Two variations of the Overman rearrangement have been developed for the highly selective synthesis of anti-vicinal amino alcohol natural products. A MOM ether-directed palladium(II)-catalyzed rearrangement of an allylic trichloroacetimidate was used as the key step for the preparation of the protein kinase C inhibitor D-erythro-sphinganine and the antitumor agent (+)-spisulosine, whereas the Overman rearrangement of chiral allylic trichloroacetimidates generated by the asymmetric reduction of an α,β-unsaturated methyl ketone allowed rapid access both to D-ribo-phytosphingosine and L-arabino-phytosphingosine.
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Affiliation(s)
- Ewen D.
D. Calder
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, United Kingdom
| | - Ahmed M. Zaed
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, United Kingdom
| | - Andrew Sutherland
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, United Kingdom
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Reddy LVR, Kumar V, Sagar R, Shaw AK. Glycal-Derived δ-Hydroxy α,β-Unsaturated Aldehydes (Perlin Aldehydes): Versatile Building Blocks in Organic Synthesis. Chem Rev 2013; 113:3605-31. [DOI: 10.1021/cr200016m] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- L. Vijaya Raghava Reddy
- Division of Medicinal and Process Chemistry, CSIR-Central Drug Research Institute, Lucknow, India-226001
| | - Vikas Kumar
- Division of Medicinal and Process Chemistry, CSIR-Central Drug Research Institute, Lucknow, India-226001
| | - Ram Sagar
- Division of Medicinal and Process Chemistry, CSIR-Central Drug Research Institute, Lucknow, India-226001
| | - Arun K. Shaw
- Division of Medicinal and Process Chemistry, CSIR-Central Drug Research Institute, Lucknow, India-226001
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11
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12
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Jung ME, Yi SW. Synthesis of threo-β-aminoalcohols from aminoaldehydes via chelation-controlled additions. Total synthesis of l-threo sphingosine and safingol. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.05.153] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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13
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Diastereoselective synthesis and bioactivity of long-chain anti-2-amino-3-alkanols. Eur J Med Chem 2011; 46:5480-6. [DOI: 10.1016/j.ejmech.2011.09.010] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2011] [Revised: 09/06/2011] [Accepted: 09/07/2011] [Indexed: 12/25/2022]
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14
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A concise enantioselective synthesis of l-(−)-733,061 and (2S,3S)-methyl 3-aminopiperidine-2-carboxylate using catalytic enantioselective aza-Henry reaction as key step. Tetrahedron 2011. [DOI: 10.1016/j.tet.2011.02.031] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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15
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Mina JG, Mosely JA, Ali HZ, Denny PW, Steel PG. Exploring Leishmania major inositol phosphorylceramide synthase (LmjIPCS): insights into the ceramide binding domain. Org Biomol Chem 2011; 9:1823-30. [PMID: 21267500 DOI: 10.1039/c0ob00871k] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis of set of ceramide analogues exploring hydrophobicity in the acyl chains and the degree and nature of hydroxylation is described. These have been assayed against the parasitic protozoan enzyme LmjIPCS. These studies showed that whilst the C-3 hydroxyl group was not essential for turnover it provided enhanced affinity. Reflecting the membrane bound nature of the enzyme a long (C(13)) hydrocarbon ceramide tail was necessary for both high affinity and turnover. Whilst the N-acyl chain also contributed to affinity, analogues lacking the amide linkage functioned as competitive inhibitors in both enzyme and cell-based assays. A model that accounts for this observation is proposed.
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Affiliation(s)
- John G Mina
- Centre for Bioactive Chemistry, Biophysical Sciences Institute, Department of Chemistry and School of Biological Sciences, Durham University, Science Laboratories, South Road, Durham, UK DH1 3LE
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16
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InCl3–CH3CN–H2O: an efficient catalyst-solvent combination for the synthesis of Perlin aldehydes and related compounds. Application in the synthesis of unnatural l-azasugars. Tetrahedron 2011. [DOI: 10.1016/j.tet.2010.11.050] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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17
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Kokatla HP, Lahiri R, Kancharla PK, Doddi VR, Vankar YD. Synthesis of (-)-deoxoprosophylline, (+)-2-epi-deoxoprosopinine, and (2R,3R)- and (2R,3S)-3-hydroxypipecolic acids from D-glycals. J Org Chem 2010; 75:4608-11. [PMID: 20524655 DOI: 10.1021/jo100489k] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
New syntheses of (-)-deoxoprosophylline, (+)-2-epi-deoxoprosopinine, and (2R,3R)- and (2R,3S)-3-hydroxypipecolic acids are reported. Utilization of the chiral functionalities of Perlin aldehydes, derived from 3,4,6-tri-O-benzyl glycals, has been done along with chemoselective saturation of olefins and reductive aminations as key steps.
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Affiliation(s)
- Hari Prasad Kokatla
- Department of Chemistry, Indian Institute of Technology Kanpur 208 016, India
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18
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Kumar P, Dubey A, Puranik VG. A general and concise asymmetric synthesis of sphingosine, safingol and phytosphingosines via tethered aminohydroxylation. Org Biomol Chem 2010; 8:5074-86. [PMID: 20844791 DOI: 10.1039/c0ob00117a] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/03/2024]
Abstract
A novel, practical and efficient enantioselective synthesis of sphingoid bases, l-threo-[2S,3S]-sphinganine (safingol), l-threo-[2S,3S]-sphingosine, l-arabino-[2R,3S,4R] and l-xylo-[2R,3S,4S]-C(18)-phytosphingosine is described. The synthetic strategy features the Sharpless kinetic resolution and tethered aminohydroxylation (TA) as the key steps.
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Affiliation(s)
- Pradeep Kumar
- Division of Organic Chemistry, National Chemical Laboratory, Pune 411008, India.
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19
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Ait-Youcef R, Moreau X, Greck C. Asymmetric Synthesis of Sphinganine and Clavaminol H. J Org Chem 2010; 75:5312-5. [DOI: 10.1021/jo1003899] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Ramzi Ait-Youcef
- Institut Lavoisier de Versailles, UMR CNRS 8180, Université de Versailles-St-Quentin-en Yvelines, 45 Avenue des Etats-Unis, 78035 Versailles Cedex, France
| | - Xavier Moreau
- Institut Lavoisier de Versailles, UMR CNRS 8180, Université de Versailles-St-Quentin-en Yvelines, 45 Avenue des Etats-Unis, 78035 Versailles Cedex, France
| | - Christine Greck
- Institut Lavoisier de Versailles, UMR CNRS 8180, Université de Versailles-St-Quentin-en Yvelines, 45 Avenue des Etats-Unis, 78035 Versailles Cedex, France
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20
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Pilgrim W, Murphy PV. Alpha-glycosphingolipids via chelation-induced anomerization of O- and S-glucuronic and galacturonic acid derivatives. Org Lett 2009; 11:939-42. [PMID: 19178158 DOI: 10.1021/ol802915h] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Bacterial glycolipids containing either alpha-glucuronic acid or alpha-galacturonic acid residues have an important role in the innate-type immune response to gram-negative bacteria. Synthesis of closely related compounds, including a novel alpha-SO(2) glycolipid mimetic, is described from carbohydrate precursors where anomerization is a key step. Very high stereoselectivites (>97:3 in favor of alpha) were observed from O-glycoside precursors.
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Affiliation(s)
- Wayne Pilgrim
- UCD School of Chemistry and Chemical Biology and Centre for Synthesis and Chemical Biology, University College Dublin, Belfield, Dublin 4, Ireland, and School of Chemistry, National University of Ireland, Galway, University Road, Galway, Ireland
| | - Paul V. Murphy
- UCD School of Chemistry and Chemical Biology and Centre for Synthesis and Chemical Biology, University College Dublin, Belfield, Dublin 4, Ireland, and School of Chemistry, National University of Ireland, Galway, University Road, Galway, Ireland
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22
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Gupta P, Vankar YD. Facile Aza-Claisen Rearrangement of Glycals: Application in the Synthesis of 1-Deoxy-L-iminosugars. European J Org Chem 2009. [DOI: 10.1002/ejoc.200801301] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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