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Ceradini D, Cacivkins P, Ramos-Llorca A, Shubin K. Improved Synthesis of the Selected Serine Protease uPA Inhibitor UAMC-00050, a Lead Compound for the Treatment of Dry Eye Disease. Org Process Res Dev 2022; 26:2937-2946. [PMID: 36311379 PMCID: PMC9594321 DOI: 10.1021/acs.oprd.2c00244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Indexed: 11/29/2022]
Abstract
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The α-aminophosphonate UAMC-00050, a newly developed
trypsin-like
serine protease inhibitor, is a lead compound for the treatment of
dry eye syndrome and ocular inflammation. The medicinal chemistry
route developed at the University of Antwerp possessed several problems
hampering the scale-up such as poor yields for some of the steps,
hazardous reagents, and environmental footprint. Herein, we report
an optimized route for the UAMC-00050, in which environmental unfriendly
solvents were excluded, hazardous reagents were replaced with safer
alternatives, and are more efficient in terms of atom economy. Every
reaction step was optimized to reach a higher yield, and design of
experiment was used to find the optimum conditions in the last step.
Furthermore, all the flash chromatography purifications of intermediates
were replaced with plug filtration, slurry purifications, or crystallization.
The overall yield was increased from 3% in the medicinal chemistry
route to 22% in the process development route.
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Affiliation(s)
- Davide Ceradini
- Latvian Institute of Organic Synthesis, Aizkraukle Iela 21, Riga LV-1006, Latvia
| | - Pavel Cacivkins
- Exponential Technologies Ltd., Dze̅rbenes iela 14, Riga LV-1006, Latvia
| | | | - Kirill Shubin
- Latvian Institute of Organic Synthesis, Aizkraukle Iela 21, Riga LV-1006, Latvia
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Shevchenko KV, Dmitriev ME, Vinyukov AV, Shevchenko VP, Kalashnikova IP, Nagaev IY, Ragulin VV, Myasoedov NF. Synthesis and Study of Properties of Phosphinic Pseudo-Prolylglycylproline. DOKLADY CHEMISTRY 2021. [DOI: 10.1134/s001250082102004x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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López R, Palomo C. N,N-Diacylaminals as Emerging Tools in Synthesis: From Peptidomimetics to Asymmetric Catalysis. Chemistry 2021; 27:20-29. [PMID: 32667706 DOI: 10.1002/chem.202002637] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 07/12/2020] [Indexed: 12/26/2022]
Abstract
N,N-Diacylaminals are flexible molecular scaffolds that have commonly been utilized as amide surrogates in peptidomimetics. The singularities of this motif as an N-acyl imine equivalent and as hydrogen-bond donor have recently opened new synthetic opportunities, especially in the field of asymmetric catalysis. This concept article highlights this diverse synthetic potential and provides the elements necessary for further developments.
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Affiliation(s)
- Rosa López
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco (UPV/EHU), Manuel de Lardizabal 3, 20018, San Sebastián, Spain
| | - Claudio Palomo
- Departamento de Química Orgánica I, Facultad de Química, Universidad del País Vasco (UPV/EHU), Manuel de Lardizabal 3, 20018, San Sebastián, Spain
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Dmitriev ME, Golovash SR, Borodachev AV, Ragulin VV. Mechanism of Phosphorus-Carbon Bond Formation in the Amidoalkylation of Phosphonous Carboxylic Acids. J Org Chem 2021; 86:593-600. [PMID: 33352042 DOI: 10.1021/acs.joc.0c02259] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
An unusual greater reactivity of phosphonous propionic acids was found in comparison with phosphonous propionic esters in carbamate version of Kabachnik-Fields reaction. Compounds of tricoordinated phosphorus generated in situ during the amidoalkylation of hydrophosphorylic compounds in acetyl chloride/acetic anhydride mixture were found by 31P NMR analysis. A hypothesis is proposed about the generation of spirophosphoranes in situ to explain the mechanism for the formation of the phosphorus-carbon bond in the reaction under study.
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Affiliation(s)
- Maxim E Dmitriev
- Institute of Physiologically Active Substances of the Russian Academy of Sciences, Severny pr. 1, Chernoglovka, Moscow Region 142432, Russia
| | - Sofia R Golovash
- Institute of Physiologically Active Substances of the Russian Academy of Sciences, Severny pr. 1, Chernoglovka, Moscow Region 142432, Russia
| | - Alexei V Borodachev
- Institute of Physiologically Active Substances of the Russian Academy of Sciences, Severny pr. 1, Chernoglovka, Moscow Region 142432, Russia
| | - Valery V Ragulin
- Institute of Physiologically Active Substances of the Russian Academy of Sciences, Severny pr. 1, Chernoglovka, Moscow Region 142432, Russia
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Golovash SR, Dmitriev ME, Shestov VI, Ragulin VV. Synthesis of Phosphinic Isosteres of Leucyl- and Isoleucylglycines. RUSS J GEN CHEM+ 2020. [DOI: 10.1134/s107036322009008x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Golovash SR, Grigorkevich OS, Tsebrikova GS, Dmitriev ME, Ragulin VV. Synthesis of Phosphinic Analogue of Alanylleucine. RUSS J GEN CHEM+ 2020. [DOI: 10.1134/s1070363220040313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abdou MM, El-Saeed RA. Potential chemical transformation of phosphinic acid derivatives and their applications in the synthesis of drugs. Bioorg Chem 2019; 90:103039. [PMID: 31220667 DOI: 10.1016/j.bioorg.2019.103039] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2018] [Revised: 05/28/2019] [Accepted: 06/03/2019] [Indexed: 11/29/2022]
Abstract
The chemical transformation of phosphinic acid is a well-considered mature area of research on account of the historical significant reactions such as Kabachnik-Fields, Mannich, Arbuzov, Michaelis-Becker, etc. Considerable advances have been made over last years especially in metal-catalyzed, free-radical processes and asymmetric synthesis using catalytic enantioselective. As a result, the aim of this synopsis is to make the reader familiar with advances in the approaches of phosphinic acids toward the synthesis of highly functionalized and valuable buildings blocks. Another purpose of this survey is to provide the current status of the applications of phosphinic acids in the synthesis of drugs.
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Affiliation(s)
- Moaz M Abdou
- Egyptian Petroleum Research Institute, Nasr City, P.O. 11727, Cairo, Egypt; Department of Chemistry, University of Liverpool, Liverpool L69 7ZD, UK.
| | - Rasha A El-Saeed
- Department of Chemistry, Faculty of Science, Mansoura University, ET-35516 Mansoura, Egypt
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Tripolszky A, Zoboki L, Bálint E, Kóti J, Keglevich G. Microwave-assisted synthesis of α-aminophosphine oxides by the Kabachnik-Fields reaction applying amides as the starting materials. SYNTHETIC COMMUN 2019. [DOI: 10.1080/00397911.2019.1584675] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Anna Tripolszky
- Department of Organic Chemistry and Technology, Budapest University of Technology and Economics, Budapest, Hungary
| | - Lili Zoboki
- Department of Organic Chemistry and Technology, Budapest University of Technology and Economics, Budapest, Hungary
| | - Erika Bálint
- Department of Organic Chemistry and Technology, Budapest University of Technology and Economics, Budapest, Hungary
| | | | - György Keglevich
- Department of Organic Chemistry and Technology, Budapest University of Technology and Economics, Budapest, Hungary
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Talma M, Maślanka M, Mucha A. Recent developments in the synthesis and applications of phosphinic peptide analogs. Bioorg Med Chem Lett 2019; 29:1031-1042. [PMID: 30846252 DOI: 10.1016/j.bmcl.2019.02.034] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Revised: 02/25/2019] [Accepted: 02/27/2019] [Indexed: 01/20/2023]
Abstract
Synthetic pseudopeptides that fit well with the active site architecture allow the most effective binding to enzymes, similar to native substrates in high-energy transition states. Phosphinic acid peptide analogs that comprise the tetrahedral phosphorus moiety introduced to replace an internal amide bond exert such an isosteric or isoelectronic resemblance, combined with providing other advantageous features, for example, metal complexing properties. Accordingly, they are capable of inhibiting metal-dependent enzymes involved in biological functions in eukaryotic and prokaryotic cells. These enzymes are associated with notorious human diseases, such as cancer, e.g., matrix metalloproteinases, or are etiological factors of protozoal and bacterial infections, e.g., metalloaminopeptidases. The affinity and selectivity of these compounds can be conveniently adjusted, either by structural modification of dedicated side chains or by backbone elongation to enhance specific interactions with the corresponding binding pockets. Recent approaches to the synthesis of these compounds are illustrated by examples of the preparation of rationally designed structures of inhibitors of particular enzymes. Activity against appealing enzymatic targets is presented, along with the molecular mechanisms of action and therapeutic implications. Innovative aspects of phosphinic peptide application, e.g., as activity-based probes, and ligands of complexes of radioisotopes for nuclear medicine are also outlined.
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Affiliation(s)
- Michał Talma
- Wrocław University of Science and Technology, Department of Bioorganic Chemistry, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
| | - Marta Maślanka
- Wrocław University of Science and Technology, Department of Bioorganic Chemistry, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
| | - Artur Mucha
- Wrocław University of Science and Technology, Department of Bioorganic Chemistry, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland.
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Vinyukov AV, Borodachev AV, Starikov AS, Afanasyev AV, Dmitriev ME, Lednev BV, Ragulin VV. An efficient one-pot synthesis of bis(α-aminoalkyl)phosphinic acids, phosphorus-isosteric analogues of HIV protease inhibitors. MENDELEEV COMMUNICATIONS 2018. [DOI: 10.1016/j.mencom.2018.05.022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Vinyukov AV, Dmitriev ME, Yarkevich AN, Ragulin VV. Cyclic Amidoalkylation of Hydrophosphorylic Compounds. Synthesis of Proline Analogs. RUSS J GEN CHEM+ 2017. [DOI: 10.1134/s107036321712026x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Dmitriev ME, Vinyukov AV, Lednev BV, Ragulin VV. Synthesis of prolyl-glutamate phosphoisostere. RUSS J GEN CHEM+ 2017. [DOI: 10.1134/s1070363217100358] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Vinyukov AV, Dmitriev ME, Afanas’ev AV, Ragulin VV, Andreeva LA, Myasoedov NF. Synthesis of P,N-protected phosphinic pseudoprolylglycine block. RUSS J GEN CHEM+ 2017. [DOI: 10.1134/s1070363217020189] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Ragulin VV. Double Michael–Pudovik addition of generated in situ silylic esters of trivalent phosphorus to unsaturated compounds. RUSS J GEN CHEM+ 2017. [DOI: 10.1134/s1070363216120240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Affiliation(s)
- Yi-Yong Huang
- Department
of Chemistry, School of Chemistry, Chemical Engineering and Life Science, Wuhan University of Technology, Wuhan 430070, P.R. China
| | - Chen Cai
- Department
of Chemistry, School of Chemistry, Chemical Engineering and Life Science, Wuhan University of Technology, Wuhan 430070, P.R. China
| | - Xing Yang
- Department
of Chemistry, School of Chemistry, Chemical Engineering and Life Science, Wuhan University of Technology, Wuhan 430070, P.R. China
| | - Zong-Chao Lv
- Department
of Chemistry, School of Chemistry, Chemical Engineering and Life Science, Wuhan University of Technology, Wuhan 430070, P.R. China
| | - Uwe Schneider
- EaStCHEM
School of Chemistry, The University of Edinburgh, The King’s Buildings, David
Brewster Road, Edinburgh EH9 3FJ, United Kingdom
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Dmitriev ME, Ragulin VV. Synthesis of phosphorus isosters of β-amyloid peptides fragments. RUSS J GEN CHEM+ 2015. [DOI: 10.1134/s1070363215090121] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Dmitriev ME, Vinyukov AV, Ragulin VV, Myasoedov NF. Synthesis of pseudo-methionyl-glutamate. RUSS J GEN CHEM+ 2015. [DOI: 10.1134/s1070363215090315] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Dmitriev ME, Yurkova LL, Lermontov SA, Ragulin VV. Formation of phosphorus-carbon bond in the course of amidoalkylation of hydrophosphorylic compounds. RUSS J GEN CHEM+ 2015. [DOI: 10.1134/s1070363215020231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Kataja AO, Masson G. Imine and iminium precursors as versatile intermediates in enantioselective organocatalysis. Tetrahedron 2014. [DOI: 10.1016/j.tet.2014.06.101] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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George N, Bekkaye M, Alix A, Zhu J, Masson G. NIS-Assisted Aza-Friedel-Crafts Reaction with α-Carbamoysulfides as Precursors ofN-Carbamoylimines. Chemistry 2014; 20:3621-5. [DOI: 10.1002/chem.201400117] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2014] [Indexed: 11/06/2022]
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Mazurkiewicz R, Październiok-Holewa A, Adamek J, Zielińska K. α-Amidoalkylating Agents. ADVANCES IN HETEROCYCLIC CHEMISTRY 2014. [DOI: 10.1016/b978-0-12-420160-6.00002-1] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Dmitriev ME, Ragulin VV. Acyloxy derivatives of trivalent phosphorus in amidoalkylation of hydrophosphoryl compounds. RUSS J GEN CHEM+ 2013. [DOI: 10.1134/s1070363213100150] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Kano T, Yurino T, Asakawa D, Maruoka K. Acid-Catalyzed In Situ Generation of Less Accessible or UnprecedentedN-Boc Imines fromN-Boc Aminals. Angew Chem Int Ed Engl 2013; 52:5532-4. [DOI: 10.1002/anie.201300231] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2013] [Revised: 03/02/2013] [Indexed: 11/07/2022]
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Kano T, Yurino T, Asakawa D, Maruoka K. Acid-Catalyzed In Situ Generation of Less Accessible or UnprecedentedN-Boc Imines fromN-Boc Aminals. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201300231] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Dmitriev ME, Ragulin VV. Acetals and N,N′-alkylidenebiscarbamates in the synthesis of N-protected α-aminophosphinic acids. RUSS J GEN CHEM+ 2012. [DOI: 10.1134/s107036321211028x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Synthesis and modifications of phosphinic dipeptide analogues. Molecules 2012; 17:13530-68. [PMID: 23154272 PMCID: PMC6268094 DOI: 10.3390/molecules171113530] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2012] [Revised: 11/09/2012] [Accepted: 11/12/2012] [Indexed: 01/01/2023] Open
Abstract
Pseudopeptides containing the phosphinate moiety (-P(O)(OH)CH2-) have been studied extensively, mainly as transition state analogue inhibitors of metalloproteases. The key synthetic aspect of their chemistry is construction of phosphinic dipeptide derivatives bearing appropriate side-chain substituents. Typically, this synthesis involves a multistep preparation of two individual building blocks, which are combined in the final step. As this methodology does not allow simple variation of the side-chain structure, many efforts have been dedicated to the development of alternative approaches. Recent achievements in this field are summarized in this review. Improved methods for the formation of the phosphinic peptide backbone, including stereoselective and multicomponent reactions, are presented. Parallel modifications leading to the structurally diversified substituents are also described. Finally, selected examples of the biomedical applications of the title compounds are given.
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Arbuzov-type reaction of acylphosphonites and N-alkoxycarbonylimine cations generated in situ with trifluoroacetic anhydride. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.01.094] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Dmitriev ME, Ragulin VV. Method of synthesis of phosphinic acids based on hypophosphites: VIII. Synthesis of α-aminoalkylphenethylphosphinic acids. RUSS J GEN CHEM+ 2011. [DOI: 10.1134/s107036321109009x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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