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Alotayeq A, Ghannay S, Alhagri IA, Ahmed I, Hammami B, E. A. E. Albadri A, Patel H, Messaoudi S, Kadri A, M. Al-Hazmy S, Aouadi K. Synthesis, optical properties, DNA, β-cyclodextrin interaction, hydrogen isotope sensor and computational study of new enantiopure isoxazolidine derivative (ISoXD). Heliyon 2024; 10:e26341. [PMID: 38404822 PMCID: PMC10884473 DOI: 10.1016/j.heliyon.2024.e26341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Revised: 02/12/2024] [Accepted: 02/12/2024] [Indexed: 02/27/2024] Open
Abstract
A novel isoxazolidine derivative (ISoXD) dye was successfully synthesized and comprehensively characterized. In this study, we conducted a thorough examination of its various properties, including optical characteristics, interactions with DNA and β-cyclodextrin (β-CD), molecular docking, molecular dynamic simulation, and density functional theory (DFT) calculations. Our investigation encompassed a systematic analysis of the absorption and emission spectra of ISoXD in diverse solvents. The observed variations in the spectroscopic data were attributed to the specific solvent's capacity to engage in hydrogen bonding interactions. Remarkably, the most pronounced intensities were observed in glycol, which can establish many hydrogen bonds with ISoXD. Furthermore, our study revealed a significant distinction in the fluorescence behavior of ISoXD when subjected to different solvents, particularly between CHCl3 and CDCl3. Moreover, we explored the fluorescence intensity of the ISoXD complex in the presence of various metals, both in ethanol and water. The ISoXD complex exhibited a substantial increase of fluorescence upon interaction with different metal ions. The utilization of DFT calculations allowed us to propose an intramolecular charge transfer (ICT) mechanism as a plausible explanation for this quenching phenomenon. The interaction of ISoXD with DNA and β-CD was studied using absorption spectra. The binding constant (K) and the standard Gibbs free energy change (ΔGo) for the interaction between DNA and β-CD with ISoXD were determined. In docking study, ISoXD exhibited significant docking scores (-6.511) and MM-GBSA binding free energies (-66.27 kcal/mol) within the PARP-1 binding cavity. Its binding pattern closely resembles to the co-crystal ligand veliparib, and during a 100ns MD simulation, ISoXD displayed strong stability and formed robust hydrogen bonds with key amino acids. These findings suggest ISoXD's potential as a PARP-1 inhibitor for further investigation in therapeutic development.
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Affiliation(s)
- Afnan Alotayeq
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Siwar Ghannay
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Ibrahim A. Alhagri
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
- Department of Chemistry, Faculty of Sciences, Ibb University, Ibb, Yemen
| | - Iqrar Ahmed
- Department of Pharmaceutical Chemistry, Prof. Ravindra Nikam College of Pharmacy, Gondur, Dhule, 424002, India
- Division of Computer Aided Drug Design, Department of Pharmaceutical Chemistry, R. C. Patel Institute of Pharmaceutical Education and Research, Shirpur, 425405, Maharashtra, India
| | - Bechir Hammami
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Abuzar E. A. E. Albadri
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Harun Patel
- Division of Computer Aided Drug Design, Department of Pharmaceutical Chemistry, R. C. Patel Institute of Pharmaceutical Education and Research, Shirpur, 425405, Maharashtra, India
| | - Sabri Messaoudi
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
- Faculty of Sciences of Bizerte, Carthage University, Jarzouna, Bizerte 7021, Tunisia
| | - Adel Kadri
- Faculty of Science of Sfax, Department of Chemistry, University of Sfax, B.P. 1171, 3000 Sfax, Tunisia
- Department of Chemistry, Faculty of Science and Arts of Baljurashi, Al- Baha University, Saudi Arabia
| | - Sadeq M. Al-Hazmy
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Kaiss Aouadi
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
- Department of Chemistry, Laboratory of Heterocyclic Chemistry Natural Product and Reactivity/CHPNR, Faculty of Science of Monastir, University of Monastir, Avenue of the Environment, Monastir, 5019, Tunisia
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Ben Hammouda M, Ahmad I, Hamdi A, Dbeibia A, Patel H, Bouali N, Sabri Hamadou W, Hosni K, Ghannay S, Alminderej F, Noumi E, Snoussi M, Aouadi K, Kadri A. Design, synthesis, biological evaluation and in silico studies of novel 1,2,3-triazole linked benzoxazine-2,4-dione conjugates as potent antimicrobial, antioxidant and anti-inflammatory agents. ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2022.104226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022] Open
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Ghannay S, Snoussi M, Messaoudi S, Kadri A, Aouadi K. Novel enantiopure isoxazolidine and C-alkyl imine oxide derivatives as potential hypoglycemic agents: Design, synthesis, dual inhibitors of α-amylase and α-glucosidase, ADMET and molecular docking study. Bioorg Chem 2020; 104:104270. [PMID: 32947132 DOI: 10.1016/j.bioorg.2020.104270] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Accepted: 09/06/2020] [Indexed: 12/16/2022]
Abstract
In an effort to explore a new class of antidiabetic inhibitors, a new series of isoxazolidine and C-alkyl imine oxide derivatives scaffolds were designed, synthesized and fully characterized. The newly synthesized analogues were evaluated for their human pancreatic α-amylase (HPA) and human lysosomal acid-α-glucosidase (HLAG) inhibitory activities and have shown a higher potency than acarbose. The compounds 7b (23.1 ± 1.1 μM) and 7a (36.3 ± 1.6 μM) were identified as the potent HPA and HLAG inhibitors with inhibitory effect up to 9 and 21-fold higher than acarbose, respectively. Antihyperglycemic activity results were supported by molecular docking approach of the most potent compounds 7b and 7a showing stronger interactions with the active site of HPA and HLAG as well as by in silico absorption, distribution, metabolism, excretion and toxicity (ADMET) profile suggesting their satisfactory oral druglikeness without toxic effect. Therefore, it can be concluded that both 7b and 7a can be used as effective lead molecules for the development of HPA and HLAG inhibitors for the management of T2DM.
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Affiliation(s)
- Siwar Ghannay
- University of Monastir, Faculty of Sciences of Monastir, Avenue of the Environment, 5019 Monastir, Tunisia; Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia
| | - Mejdi Snoussi
- Department of Biology, College of Science, Hail, P.O. 2440, University of Ha'il City 2440, Saudi Arabia; Laboratory of Genetics, Biodiversity and Valorization of Bio-resources (LR11ES41), University of Monastir, Higher Institute of Biotechnology of Monastir, Avenue Tahar Haddad, BP74, 5000 Monastir, Tunisia
| | - Sabri Messaoudi
- Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia; Carthage University, Faculty of Sciences of Bizerte, 7021 Jarzouna, Tunisia
| | - Adel Kadri
- Faculty of Science of Sfax, Department of Chemistry, Sfax University, B.P. 1171, 3000 Sfax, Tunisia; College of Science and Arts in Baljurashi, Albaha University, P.O. Box (1988), Albaha, Saudi Arabia
| | - Kaïss Aouadi
- University of Monastir, Faculty of Sciences of Monastir, Avenue of the Environment, 5019 Monastir, Tunisia; Department of Chemistry, College of Science, Qassim University, Buraidah 51452, Saudi Arabia.
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Hamdi A, Laurent MY, Hémon-Ribaud A, Mostafa AS, Massoud MA, Selim KB, Dujardin G. 1,3-Dipolar cycloaddition of vinyloxy quinolines with α-alkoxy carbonyl aldonitrones or cyclic surrogates: A comparative study for an asymmetric access to trans 4-quinolinoxy oxaprolines. Tetrahedron 2019. [DOI: 10.1016/j.tet.2018.12.019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Sambasiva Rao P, Ashalu KC, Dev GJ, Ravi Kumar N, Srinivas PVSS, Thomas BV, Narsaiah B. Efficient method for the synthesis of 1,2,3-triazole functionalized isoxazolidine derivatives by 1,3-dipolar cycloaddition of nitrones with terminal olefins. SYNTHETIC COMMUN 2017. [DOI: 10.1080/00397911.2016.1271133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- P. Sambasiva Rao
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
| | - K. Chinna Ashalu
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
| | - G. Jitender Dev
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
| | - N. Ravi Kumar
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
| | - P. V. S. S. Srinivas
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
| | - B. V. Thomas
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
| | - B. Narsaiah
- Fluoroorganic Division, CSIR-Indian Institute of Chemical Technology, Tarnaka, Hyderabad, India
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Berthet M, Cheviet T, Dujardin G, Parrot I, Martinez J. Isoxazolidine: A Privileged Scaffold for Organic and Medicinal Chemistry. Chem Rev 2016; 116:15235-15283. [PMID: 27981833 DOI: 10.1021/acs.chemrev.6b00543] [Citation(s) in RCA: 164] [Impact Index Per Article: 20.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
The isoxazolidine ring represents one of the privileged structures in medicinal chemistry, and there have been an increasing number of studies on isoxazolidine and isoxazolidine-containing compounds. Optimization of the 1,3-dipolar cycloaddition (1,3-DC), original methods including electrophilic or palladium-mediated cyclization of unsaturated hydroxylamine, has been developed to obtain isoxazolidines. Novel reactions involving the isoxazolidine ring have been highlighted to accomplish total synthesis or to obtain bioactive compounds, one of the most significant examples being probably the thermic ring contraction applied to the total synthesis of (±)-Gelsemoxonine. The unique isoxazolidine scaffold also exhibits an impressive potential as a mimic of nucleosides, carbohydrates, PNA, amino acids, and steroid analogs. This review aims to be a comprehensive and general summary of the different isoxazolidine syntheses, their use as starting building blocks for the preparation of natural compounds, and their main biological activities.
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Affiliation(s)
- Mathéo Berthet
- Institut des Biomolécules Max Mousseron , IBMM UMR-5247 CNRS, Université de Montpellier, ENSCM, CC17-03, Pl. E. Bataillon, 34095 Montpellier Cedex 5, France
| | - Thomas Cheviet
- Institut des Biomolécules Max Mousseron , IBMM UMR-5247 CNRS, Université de Montpellier, ENSCM, CC17-03, Pl. E. Bataillon, 34095 Montpellier Cedex 5, France
| | - Gilles Dujardin
- Institut des Molécules et Matériaux du Mans , IMMM UMR 6283 CNRS, Université du Maine, UFR Sciences et Techniques, Avenue Olivier Messiaen, 72085 Le Mans, France
| | - Isabelle Parrot
- Institut des Biomolécules Max Mousseron , IBMM UMR-5247 CNRS, Université de Montpellier, ENSCM, CC17-03, Pl. E. Bataillon, 34095 Montpellier Cedex 5, France
| | - Jean Martinez
- Institut des Biomolécules Max Mousseron , IBMM UMR-5247 CNRS, Université de Montpellier, ENSCM, CC17-03, Pl. E. Bataillon, 34095 Montpellier Cedex 5, France
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Brahmi J, Aouadi K, Msaddek M, Praly JP, Vidal S. A stereoselective method for the synthesis of enantiopure 3-substituted 4-hydroxyproline derivatives via 1,3-dipolar cycloadditions. CR CHIM 2016. [DOI: 10.1016/j.crci.2016.03.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Abda H, Aouadi K, Perrin L, Msaddek M, Praly JP, Vidal S. Stereoselective Synthesis of Enantiopure Cycloalkylglycines by 1,3-Dipolar Cycloaddition of a Chiral Nitrone to Cycloalkenes. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402842] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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Aouadi K, Abdoul-Zabar J, Msaddek M, Praly JP. A Cycloaddition-Cyclization Combined Approach to Enantiopure 3-Glycinyl-4-hydroxypyrrolidines and 3-Substituted 4-Hydroxyprolines. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402215] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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