1
|
Kristensen R, Andersen JB, Rybtke M, Jansen CU, Fritz BG, Kiilerich RO, Uhd J, Bjarnsholt T, Qvortrup K, Tolker-Nielsen T, Givskov M, Jakobsen TH. Inhibition of Pseudomonas aeruginosa quorum sensing by chemical induction of the MexEF-oprN efflux pump. Antimicrob Agents Chemother 2024; 68:e0138723. [PMID: 38189278 PMCID: PMC10848761 DOI: 10.1128/aac.01387-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Accepted: 11/17/2023] [Indexed: 01/09/2024] Open
Abstract
The cell-to-cell communication system quorum sensing (QS), used by various pathogenic bacteria to synchronize gene expression and increase host invasion potentials, is studied as a potential target for persistent infection control. To search for novel molecules targeting the QS system in the Gram-negative opportunistic pathogen Pseudomonas aeruginosa, a chemical library consisting of 3,280 small compounds from LifeArc was screened. A series of 10 conjugated phenones that have not previously been reported to target bacteria were identified as inhibitors of QS in P. aeruginosa. Two lead compounds (ethylthio enynone and propylthio enynone) were re-synthesized for verification of activity and further elucidation of the mode of action. The isomeric pure Z-ethylthio enynone was used for RNA sequencing, revealing a strong inhibitor of QS-regulated genes, and the QS-regulated virulence factors rhamnolipid and pyocyanin were significantly decreased by treatment with the compounds. A transposon mutagenesis screen performed in a newly constructed lasB-gfp monitor strain identified the target of Z-ethylthio enynone in P. aeruginosa to be the MexEF-OprN efflux pump, which was further established using defined mex knockout mutants. Our data indicate that the QS inhibitory capabilities of Z-ethylthio enynone were caused by the drainage of intracellular signal molecules as a response to chemical-induced stimulation of the MexEF-oprN efflux pump, thereby inhibiting the autogenerated positive feedback and its enhanced signal-molecule synthesis.
Collapse
Affiliation(s)
- Rasmus Kristensen
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | - Jens Bo Andersen
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | - Morten Rybtke
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | | | - Blaine Gabriel Fritz
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | - Rikke Overgaard Kiilerich
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | - Jesper Uhd
- Department of Chemistry, Technical University of Denmark, Lyngby, Denmark
| | - Thomas Bjarnsholt
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
- Department of Clinical Microbiology, Rigshospitalet, Copenhagen, Denmark
| | - Katrine Qvortrup
- Department of Chemistry, Technical University of Denmark, Lyngby, Denmark
| | - Tim Tolker-Nielsen
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | - Michael Givskov
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| | - Tim Holm Jakobsen
- Department of Immunology and Microbiology, Costerton Biofilm Center, University of Copenhagen, Copenhagen, Denmark
| |
Collapse
|
2
|
Lei Y, Zhu W, Zhang Y, Hu Q, Dong J, Hu Y. Benzisoxazole core and benzoxazolopyrrolidine via HDDA-derived benzyne with PTIO/DMPO. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2022.107778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
|
3
|
Fluegel LL, Hoye TR. Hexadehydro-Diels-Alder Reaction: Benzyne Generation via Cycloisomerization of Tethered Triynes. Chem Rev 2021; 121:2413-2444. [PMID: 33492939 PMCID: PMC8008985 DOI: 10.1021/acs.chemrev.0c00825] [Citation(s) in RCA: 90] [Impact Index Per Article: 30.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The hexadehydro-Diels-Alder (HDDA) reaction is the thermal cyclization of an alkyne and a 1,3-diyne to generate a benzyne intermediate. This is then rapidly trapped, in situ, by a variety of species to yield highly functionalized benzenoid products. In contrast to nearly all other methods of aryne generation, no other reagents are required to produce an HDDA benzyne. The versatile and customizable nature of the process has attracted much attention due not only to its synthetic potential but also because of the fundamental mechanistic insights the studies often afford. The authors have attempted to provide here a comprehensive compilation of publications appearing by mid-2020 that describe experimental results of HDDA reactions.
Collapse
Affiliation(s)
- Lucas L Fluegel
- Department of Chemistry, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Thomas R Hoye
- Department of Chemistry, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| |
Collapse
|
4
|
Mitake A, Nagai R, Sekine A, Takano H, Sugimura N, Kanyiva KS, Shibata T. Consecutive HDDA and TDDA reactions of silicon-tethered tetraynes for the synthesis of dibenzosilole-fused polycyclic compounds and their unique reactivity. Chem Sci 2019; 10:6715-6720. [PMID: 31367326 PMCID: PMC6625486 DOI: 10.1039/c9sc00960d] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Accepted: 05/25/2019] [Indexed: 12/28/2022] Open
Abstract
Silicon-tethered tetraynes possessing a 1,3-diyne moiety underwent consecutive hexadehydro- and tetradehydro-Diels-Alder reactions to give a series of fused polycyclic aromatic compounds containing a dibenzosilole skeleton. The benzene ring in the product acted as a 1,3-diene and reacted with the active alkyne as well as oxygen to provide [4 + 2] cycloadducts.
Collapse
Affiliation(s)
- Akihito Mitake
- Department of Chemistry and Biochemistry , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan .
| | - Rikako Nagai
- Department of Chemistry and Biochemistry , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan .
| | - Ayato Sekine
- Department of Chemistry and Biochemistry , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan .
| | - Hideaki Takano
- Department of Chemistry and Biochemistry , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan .
| | - Natsuhiko Sugimura
- Materials Characterization Central Laboratory , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan
| | - Kyalo Stephen Kanyiva
- Global Center for Science and Engineering , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan
| | - Takanori Shibata
- Department of Chemistry and Biochemistry , School of Advanced Science and Engineering , Waseda University , Shinjuku , Tokyo 169-8555 , Japan .
| |
Collapse
|
5
|
Uchida K, Yoshida S, Hosoya T. Synthetic Aryne Chemistry toward Multicomponent Coupling. J SYN ORG CHEM JPN 2019. [DOI: 10.5059/yukigoseikyokaishi.77.145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
| | - Suguru Yoshida
- Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University
| | - Takamitsu Hosoya
- Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University
| |
Collapse
|
6
|
Hamal KB, Chalifoux WA. One-Pot Synthesis of α-Carbonyl Bicyclic Furans via a Sequential Diels–Alder/5-Exo-Dig Cyclization/Oxidation Reaction. J Org Chem 2017; 82:12920-12927. [DOI: 10.1021/acs.joc.7b02479] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Khagendra B. Hamal
- Department of Chemistry, University of Nevada, Reno, Nevada 89557-0216, United States
| | - Wesley A. Chalifoux
- Department of Chemistry, University of Nevada, Reno, Nevada 89557-0216, United States
| |
Collapse
|
7
|
Gupta S, Xie P, Xia Y, Lee D. Reactivity and Selectivity in the Intermolecular Alder–Ene Reactions of Arynes with Functionalized Alkenes. Org Lett 2017; 19:5162-5165. [PMID: 28901155 DOI: 10.1021/acs.orglett.7b02438] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Saswata Gupta
- Department
of Chemistry, University of Illinois at Chicago, 845 West Taylor
Street, Chicago, Illinois 60607, United States
| | - Peipei Xie
- College
of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, Zhejiang Province 325035, P. R. China
| | - Yuanzhi Xia
- College
of Chemistry and Materials Engineering, Wenzhou University, Wenzhou, Zhejiang Province 325035, P. R. China
| | - Daesung Lee
- Department
of Chemistry, University of Illinois at Chicago, 845 West Taylor
Street, Chicago, Illinois 60607, United States
| |
Collapse
|
8
|
Ghorai S, Lee D. Aryne formation via the hexadehydro Diels-Alder reaction and their Ritter-type transformations catalyzed by a cationic silver complex. Tetrahedron 2017. [DOI: 10.1016/j.tet.2017.02.008] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
9
|
|
10
|
Diamond OJ, Marder TB. Methodology and applications of the hexadehydro-Diels–Alder (HDDA) reaction. Org Chem Front 2017. [DOI: 10.1039/c7qo00071e] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Hexadehydro-Diels–Alder (HDDA) reactions between alkynes and 1,3-diynes readily generate highly reactive and synthetically useful arynes.
Collapse
Affiliation(s)
- Oliver J. Diamond
- Institut für Anorganische Chemie
- Julius-Maximilians-Universität Würzburg
- 97074 Würzburg
- Germany
- Department of Chemistry
| | - Todd B. Marder
- Institut für Anorganische Chemie
- Julius-Maximilians-Universität Würzburg
- 97074 Würzburg
- Germany
| |
Collapse
|
11
|
|
12
|
Wang T, Hoye TR. Hexadehydro-Diels-Alder (HDDA)-Enabled Carbazolyne Chemistry: Single Step, de Novo Construction of the Pyranocarbazole Core of Alkaloids of the Murraya koenigii (Curry Tree) Family. J Am Chem Soc 2016; 138:13870-13873. [PMID: 27734671 DOI: 10.1021/jacs.6b09628] [Citation(s) in RCA: 76] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Here we report the use of the hexadehydro-Diels-Alder (HDDA) reaction for the de novo construction of a benzenoid ring in fused polycyclic heteroaromatic carbazole (i.e., [2,3]-benzoindole) skeletons. The strategy allows creation of highly substituted benzenoids. We also describe the HDDA-enabled chemical synthesis of the natural product alkaloids mahanimbine and koenidine. Trapping of the intermediate carbazolyne with a conjugated enal, proceeding through formal [2+2] cycloaddition, 4π-electrocyclic ring opening, and 6π-electrocyclic ring-closing events, constitutes a robust method for producing pyranocarbazoles.
Collapse
Affiliation(s)
- Tao Wang
- Department of Chemistry, 207 Pleasant Street, SE, University of Minnesota , Minneapolis, Minnesota 55455, United States
| | - Thomas R Hoye
- Department of Chemistry, 207 Pleasant Street, SE, University of Minnesota , Minneapolis, Minnesota 55455, United States
| |
Collapse
|
13
|
Sieck C, Tay MG, Thibault MH, Edkins RM, Costuas K, Halet JF, Batsanov AS, Haehnel M, Edkins K, Lorbach A, Steffen A, Marder TB. Reductive Coupling of Diynes at Rhodium Gives Fluorescent Rhodacyclopentadienes or Phosphorescent Rhodium 2,2'-Biphenyl Complexes. Chemistry 2016; 22:10523-32. [PMID: 27355689 DOI: 10.1002/chem.201601912] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2016] [Indexed: 01/08/2023]
Abstract
Reactions of [Rh(κ(2) -O,O-acac)(PMe3 )2 ] (acac=acetylacetonato) and α,ω-bis(arylbutadiynyl)alkanes afford two isomeric types of MC4 metallacycles with very different photophysical properties. As a result of a [2+2] reductive coupling at Rh, 2,5-bis(arylethynyl)rhodacyclopentadienes (A) are formed, which display intense fluorescence (Φ=0.07-0.54, τ=0.2-2.5 ns) despite the presence of the heavy metal atom. Rhodium biphenyl complexes (B), which show exceptionally long-lived (hundreds of μs) phosphorescence (Φ=0.01-0.33) at room temperature in solution, have been isolated as a second isomer originating from an unusual [4+2] cycloaddition reaction and a subsequent β-H-shift. We attribute the different photophysical properties of isomers A and B to a higher excited state density and a less stabilized T1 state in the biphenyl complexes B, allowing for more efficient intersystem crossing S1 →Tn and T1 →S0 . Control of the isomer distribution is achieved by modification of the bis- (diyne) linker length, providing a fundamentally new route to access photoactive metal biphenyl compounds.
Collapse
Affiliation(s)
- Carolin Sieck
- Institut für Anorganische Chemie, Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Meng Guan Tay
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK.,Faculty of Resource Science and Technology, Universiti Malaysia Sarawak, 94300, Kota Samarahan, Malaysia
| | | | - Robert M Edkins
- Institut für Anorganische Chemie, Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Karine Costuas
- Institut des Sciences Chimiques de Rennes, UMR 6226 CNRS, Université de Rennes 1, 35042, Rennes Cedex, France
| | - Jean-François Halet
- Institut des Sciences Chimiques de Rennes, UMR 6226 CNRS, Université de Rennes 1, 35042, Rennes Cedex, France
| | - Andrei S Batsanov
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
| | - Martin Haehnel
- Institut für Anorganische Chemie, Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Katharina Edkins
- School of Medicine, Pharmacy and Health, Durham University, University Boulevard, Stockton-on-Tees, TS17 6BH, UK
| | - Andreas Lorbach
- Institut für Anorganische Chemie, Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Andreas Steffen
- Institut für Anorganische Chemie, Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany.,Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
| | - Todd B Marder
- Institut für Anorganische Chemie, Julius-Maximilians-Universität Würzburg, Am Hubland, 97074, Würzburg, Germany. .,Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK.
| |
Collapse
|
14
|
Chen J, Palani V, Hoye TR. Reactions of HDDA-Derived Benzynes with Sulfides: Mechanism, Modes, and Three-Component Reactions. J Am Chem Soc 2016; 138:4318-21. [PMID: 27010747 DOI: 10.1021/jacs.6b01025] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report here reactions of alkyl sulfides with benzynes thermally generated by the hexadehydro-Diels-Alder (HDDA) cycloisomerization. The initially produced 1,3-betaine (o-sulfonium/aryl carbanion) undergoes intramolecular proton transfer to generate a more stable S-aryl sulfur ylide. This can react in various manners, including engaging weak acids (HA) in the reaction medium. This can produce transient ion pairs ArSR2(+)A(-) that proceed to the products ArSR + RA. When cyclic sulfides are used, A(-) opens the ring and is incorporated into the product, an outcome that constitutes a versatile, three-component coupling process.
Collapse
Affiliation(s)
- Junhua Chen
- Department of Chemistry, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Vignesh Palani
- Department of Chemistry, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Thomas R Hoye
- Department of Chemistry, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| |
Collapse
|
15
|
Li W, Zhou L, Zhang J. Recent Progress in Dehydro(genative) Diels-Alder Reaction. Chemistry 2015; 22:1558-71. [DOI: 10.1002/chem.201503571] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2015] [Indexed: 11/08/2022]
Affiliation(s)
- Wenbo Li
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes; School of Chemistry and Molecular Engineering; East China Normal University; 3663 N. Zhongshan Road Shanghai 200062 P. R. China
| | - Liejin Zhou
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes; School of Chemistry and Molecular Engineering; East China Normal University; 3663 N. Zhongshan Road Shanghai 200062 P. R. China
| | - Junliang Zhang
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes; School of Chemistry and Molecular Engineering; East China Normal University; 3663 N. Zhongshan Road Shanghai 200062 P. R. China
- State Key Laboratory of Organometallic Chemistry; Shanghai Institute of Organic Chemistry; CAS; 345 Lingling Road Shanghai 200032 China
| |
Collapse
|
16
|
Skraba-Joiner SL, Johnson RP, Agarwal J. Dehydropericyclic Reactions: Symmetry-Controlled Routes to Strained Reactive Intermediates. J Org Chem 2015; 80:11779-87. [DOI: 10.1021/acs.joc.5b01488] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sarah L. Skraba-Joiner
- Department of Chemistry and
Materials Science Program, University of New Hampshire, Durham, New Hampshire 03824, United States
| | - Richard P. Johnson
- Department of Chemistry and
Materials Science Program, University of New Hampshire, Durham, New Hampshire 03824, United States
| | - Jay Agarwal
- Center for Computational
Quantum Chemistry, University of Georgia , Athens, Georgia 30602, United States
| |
Collapse
|