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Vikhrankar SS, Satbhai S, Kulkarni P, Ranbhor R, Ramakrishnan V, Kodgire P. Enzymatic Routes for Chiral Amine Synthesis: Protein Engineering and Process Optimization. Biologics 2024; 18:165-179. [PMID: 38948006 PMCID: PMC11214570 DOI: 10.2147/btt.s446712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Accepted: 06/14/2024] [Indexed: 07/02/2024]
Abstract
Chiral amines are essential motifs in pharmaceuticals, agrochemicals, and specialty chemicals. While traditional chemical routes to chiral amines often lack stereoselectivity and require harsh conditions, biocatalytic methods using engineered enzymes can offer high efficiency and selectivity under sustainable conditions. This review discusses recent advances in protein engineering of transaminases, oxidases, and other enzymes to improve catalytic performance. Strategies such as directed evolution, immobilization, and computational redesign have expanded substrate scope and enhanced efficiency. Furthermore, process optimization guided by techno-economic assessments has been crucial for establishing viable biomanufacturing routes. Combining state-of-the-art enzyme engineering with multifaceted process development will enable scalable, economical enzymatic synthesis of diverse chiral amine targets.
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Affiliation(s)
| | | | | | | | - Vibin Ramakrishnan
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam, India
| | - Prashant Kodgire
- Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Indore, MP, India
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Abimbola Salubi C, Abbo HS, Jahed N, Titinchi S. Medicinal chemistry perspectives on the development of piperazine-containing HIV-1 inhibitors. Bioorg Med Chem 2024; 99:117605. [PMID: 38246116 DOI: 10.1016/j.bmc.2024.117605] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 01/10/2024] [Accepted: 01/12/2024] [Indexed: 01/23/2024]
Abstract
The Human immunodeficiency virus (HIV) is the causative agent of acquired immunodeficiency syndrome (AIDS), one of the most perilous diseases known to humankind. A 2023 estimate put the number of people living with HIV around 40 million worldwide, with the majority benefiting from various antiretroviral therapies. Consequently, the urgent need for the development of effective drugs to combat this virus cannot be overstated. In the realm of medicinal and organic chemistry, the synthesis and identification of novel compounds capable of inhibiting HIV enzymes at different stages of their life cycle are of paramount importance. Notably, the spotlight is on the progress made in enhancing the potency of HIV inhibitors through the use of piperazine-based compounds. Multiple studies have revealed that the incorporation of a piperazine moiety results in a noteworthy enhancement of anti-HIV activity. The piperazine ring assumes a pivotal role in shaping the pharmacophore responsible for inhibiting HIV-1 at critical stage, including attachment, reverse transcription, integration, and protease activity. This review also sheds light on the various opportunities that can be exploited to develop effective antiretroviral targets and eliminate latent HIV reservoirs. The advancement of highly potent analogues in HIV inhibitor research has been greatly facilitated by contemporary medicinal strategies, including molecular/fragment hybridization, structure-based drug design, and bioisosterism. These techniques have opened up new avenues for the development of compounds with enhanced efficacy in combating the virus.
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Affiliation(s)
- Christiana Abimbola Salubi
- Department of Chemistry, Faculty of Natural Sciences, University of the Western Cape, Cape Town, South Africa
| | - Hanna S Abbo
- Department of Chemistry, Faculty of Natural Sciences, University of the Western Cape, Cape Town, South Africa
| | - Nazeeen Jahed
- Department of Chemistry, Faculty of Natural Sciences, University of the Western Cape, Cape Town, South Africa
| | - Salam Titinchi
- Department of Chemistry, Faculty of Natural Sciences, University of the Western Cape, Cape Town, South Africa.
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Zhu Y, Li H, Lin K, Wang B, Zhou W. A novel and efficient asymmetric synthesis of anti-HIV drug maraviroc. SYNTHETIC COMMUN 2019. [DOI: 10.1080/00397911.2019.1607875] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Yijun Zhu
- Changzhou Pharmaceutical Factory, Changzhou, China
| | - Hongyan Li
- State Key Laboratory of New Drug & Pharmaceutical Process, Shanghai Key Laboratory of Anti-Infectives, State Institute of Pharmaceutical Industry, Shanghai, China
| | - Kuaile Lin
- State Key Laboratory of New Drug & Pharmaceutical Process, Shanghai Key Laboratory of Anti-Infectives, State Institute of Pharmaceutical Industry, Shanghai, China
| | - Bing Wang
- Changzhou Pharmaceutical Factory, Changzhou, China
| | - Weicheng Zhou
- State Key Laboratory of New Drug & Pharmaceutical Process, Shanghai Key Laboratory of Anti-Infectives, State Institute of Pharmaceutical Industry, Shanghai, China
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Afewerki S, Wang JX, Liao WW, Córdova A. The Chemical Synthesis and Applications of Tropane Alkaloids. THE ALKALOIDS. CHEMISTRY AND BIOLOGY 2018; 81:151-233. [PMID: 30685050 DOI: 10.1016/bs.alkal.2018.06.001] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Tropanes are an important class of alkaloid natural products that are found in plants all over the world. These compounds can exhibit significant biological activity and are among the oldest known medicines. In the early 19th century, tropanes were isolated, characterized, and synthesized by notable chemical researchers. Their significant biological activities have inspired tremendous research efforts toward their synthesis and the elucidation of their pharmacological activity both in academia and in industry. In this chapter, which addresses the developments in this field since 1994, the focus is on the synthesis of these compounds, and several examples of sophisticated synthetic protocols involving both asymmetric and catalytic approaches are described. In addition, the structures of more than 100 new alkaloids are included as well as the applications and pharmacological properties of some tropane alkaloids.
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Affiliation(s)
- Samson Afewerki
- Department of Natural Sciences, Mid Sweden University, Sundsvall, Sweden; Berzelii Center EXSELENT, The Arrhenius Laboratory, Stockholm University, Stockholm, Sweden
| | - Jia-Xin Wang
- Department of Organic Chemistry, College of Chemistry, Jilin University, Changchun, China
| | - Wei-Wei Liao
- Department of Organic Chemistry, College of Chemistry, Jilin University, Changchun, China.
| | - Armando Córdova
- Department of Natural Sciences, Mid Sweden University, Sundsvall, Sweden; Berzelii Center EXSELENT, The Arrhenius Laboratory, Stockholm University, Stockholm, Sweden.
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Zhou S, Wang S, Wang J, Nian Y, Peng P, Soloshonok VA, Liu H. Configurationally Stable (S
)- and (R
)-α-Methylproline-Derived Ligands for the Direct Chemical Resolution of Free Unprotected β3
-Amino Acids. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800120] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Shengbin Zhou
- University of Chinese Academy of Sciences; No.19A Yuquan Road 100049 Beijing China
- CAS Key Laboratory of Receptor Research; Shanghai Institute of Materia Medica; Chinese Academy of Sciences; 555 Zuchongzhi Road 201203 Shanghai China
| | - Shuni Wang
- University of Chinese Academy of Sciences; No.19A Yuquan Road 100049 Beijing China
- CAS Key Laboratory of Receptor Research; Shanghai Institute of Materia Medica; Chinese Academy of Sciences; 555 Zuchongzhi Road 201203 Shanghai China
| | - Jiang Wang
- University of Chinese Academy of Sciences; No.19A Yuquan Road 100049 Beijing China
- CAS Key Laboratory of Receptor Research; Shanghai Institute of Materia Medica; Chinese Academy of Sciences; 555 Zuchongzhi Road 201203 Shanghai China
| | - Yong Nian
- University of Chinese Academy of Sciences; No.19A Yuquan Road 100049 Beijing China
- CAS Key Laboratory of Receptor Research; Shanghai Institute of Materia Medica; Chinese Academy of Sciences; 555 Zuchongzhi Road 201203 Shanghai China
| | - Panfeng Peng
- University of Chinese Academy of Sciences; No.19A Yuquan Road 100049 Beijing China
- CAS Key Laboratory of Receptor Research; Shanghai Institute of Materia Medica; Chinese Academy of Sciences; 555 Zuchongzhi Road 201203 Shanghai China
| | - Vadim A. Soloshonok
- Department of Organic Chemistry I; Faculty of Chemistry; University of the Basque Country UPV/EHU; Paseo Manuel Lardizábal 3 20018 San Sebastián Spain
- IKERBASQUE - Basque Foundation for Science; Maria Diaz de Haro 3 48013 Bilbao Spain
| | - Hong Liu
- University of Chinese Academy of Sciences; No.19A Yuquan Road 100049 Beijing China
- CAS Key Laboratory of Receptor Research; Shanghai Institute of Materia Medica; Chinese Academy of Sciences; 555 Zuchongzhi Road 201203 Shanghai China
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A novel dual-luciferase assay for anti-HIV drug screening based on the CCR5/CXCR4 promoters. J Virol Methods 2018; 256:17-23. [PMID: 29481882 DOI: 10.1016/j.jviromet.2018.02.016] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2017] [Revised: 02/20/2018] [Accepted: 02/20/2018] [Indexed: 02/07/2023]
Abstract
Acquired immunodeficiency syndrome (AIDS) is a serious worldwide disease caused by infection with the human immunodeficiency virus (HIV). C-C chemokine receptor 5 (CCR5) and C-X-C chemokine receptor 4 (CXCR4) are important coreceptors mediating HIV-1 cell entry. Many new anti-HIV drugs are currently in preclinical and clinical trials; however, drug development has proceeded slowly partly because of the lack of a high-throughput system to screen these drugs. Here, we describe the development of a novel dual-luciferase assay using a CCR5/CXCR4 promoter-driven firefly and Renilla luciferase vector (pGL4.10-RLUC-CCR5/CXCR4). Drugs were screened for the ability to regulate CCR5 and CXCR4 promoter activities. The CCR5 and CXCR4 promoters were inserted separately into the recombinant vector and transfected into the acute T lymphocyte leukemia cell line H9. Treatment of stable transfected cells with four traditional Chinese medicine compounds resulted in the dose-dependent inhibition of the CXCR4 and CCR5 promoter activities. The dual-luciferase reporter assay provides a rapid and direct method to screen anti-AIDS/HIV drugs.
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Spreider PA, Haydl AM, Heinrich M, Breit B. Rhodium-Catalyzed Diastereoselective Cyclization of Allenyl-Sulfonylcarbamates: A Stereodivergent Approach to 1,3-Aminoalcohol Derivatives. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201609366] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Pierre A. Spreider
- Institut für Organische Chemie; Albert-Ludwigs-Universität Freiburg; Albertstrasse 21 79104 Freiburg im Breisgau Germany
| | - Alexander M. Haydl
- Institut für Organische Chemie; Albert-Ludwigs-Universität Freiburg; Albertstrasse 21 79104 Freiburg im Breisgau Germany
| | - Marc Heinrich
- Institut für Organische Chemie; Albert-Ludwigs-Universität Freiburg; Albertstrasse 21 79104 Freiburg im Breisgau Germany
| | - Bernhard Breit
- Institut für Organische Chemie; Albert-Ludwigs-Universität Freiburg; Albertstrasse 21 79104 Freiburg im Breisgau Germany
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Spreider PA, Haydl AM, Heinrich M, Breit B. Rhodium-Catalyzed Diastereoselective Cyclization of Allenyl-Sulfonylcarbamates: A Stereodivergent Approach to 1,3-Aminoalcohol Derivatives. Angew Chem Int Ed Engl 2016; 55:15569-15573. [PMID: 27862829 DOI: 10.1002/anie.201609366] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Indexed: 11/06/2022]
Abstract
A diastereoselective and stereodivergent rhodium-catalyzed intramolecular coupling of sulfonylcarbamates with terminal allenes is described and it provides selective access to 1,3-aminoalcohol derivatives, scaffolds found in bioactive compounds. The reaction is compatible with a large range of different functional groups, thus furnishing products with high diastereoselectivities and yields. Moreover, multigram scale reactions, as well as the application of suitable product transformations were demonstrated.
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Affiliation(s)
- Pierre A Spreider
- Institut für Organische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, 79104, Freiburg im Breisgau, Germany
| | - Alexander M Haydl
- Institut für Organische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, 79104, Freiburg im Breisgau, Germany
| | - Marc Heinrich
- Institut für Organische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, 79104, Freiburg im Breisgau, Germany
| | - Bernhard Breit
- Institut für Organische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, 79104, Freiburg im Breisgau, Germany
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