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Han Z, Angerer H, Bischoff I, Qin Y, Stegmann D, Tuz K, Fritz G, Juarez O, Fürst R, Lashley D, Nasiri HR. Concise Synthesis of 1,4-Benzoquinone-Based Natural Products as Mitochondrial Complex I Substrates and Substrate-Based Inhibitors. ChemMedChem 2020; 15:2491-2499. [PMID: 32730688 DOI: 10.1002/cmdc.202000307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 07/22/2020] [Indexed: 11/06/2022]
Abstract
A short, efficient one-step synthesis of 2-methyl-5-(3-methyl-2-butenyl)-1,4-benzoquinone, a natural product from Pyrola media is described. The synthesis is based on a direct late C-H functionalization of the quinone scaffold. The formation of the natural product was confirmed by means of 2D-NMR spectroscopy. Additional derivatives were synthesized and tested alongside the natural product as potential substrate and substrate-based inhibitors of mitochondrial complex I (MCI). The structure-activity relationship study led to the discovery of 3-methylbuteneoxide-1,4-anthraquinone (1 i), an inhibitor with an IC50 of 5 μM against MCI. The identified molecule showed high selectivity for MCI when tested against other quinone-converting enzymes, including succinate dehydrogenase, and the Na (+)-translocating NADH:quinone oxidoreductase. Moreover, the identified inhibitor was also active in cell-based proliferation assays. Therefore, 1 i can be considered as a novel chemical probe for MCI.
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Affiliation(s)
- Zhenyu Han
- Department of Chemistry, William & Mary, Williamsburg, VA, 23185, USA
| | - Heike Angerer
- Medical School, Institute of Biochemistry II Structural Bioenergetics Group, Goethe University, 60590, Frankfurt am Main, Germany.,Centre for Biomolecular Magnetic Resonance Institute for Biophysical Chemistry, Goethe University, 60438, Frankfurt am Main, Germany
| | - Iris Bischoff
- Institute of Pharmaceutical Biology, Goethe University, 60438, Frankfurt am Main, Germany
| | - Yihan Qin
- Department of Chemistry, William & Mary, Williamsburg, VA, 23185, USA
| | - Dennis Stegmann
- Department of Cellular Microbiology, University Hohenheim, 70599, Stuttgart, Germany
| | - Karina Tuz
- Department of Biological Sciences, Illinois Institute of Technology, Chicago, IL, 60616, USA
| | - Günter Fritz
- Department of Cellular Microbiology, University Hohenheim, 70599, Stuttgart, Germany
| | - Oscar Juarez
- Department of Biological Sciences, Illinois Institute of Technology, Chicago, IL, 60616, USA
| | - Robert Fürst
- Institute of Pharmaceutical Biology, Goethe University, 60438, Frankfurt am Main, Germany
| | - Dana Lashley
- Department of Chemistry, William & Mary, Williamsburg, VA, 23185, USA
| | - Hamid R Nasiri
- Department of Cellular Microbiology, University Hohenheim, 70599, Stuttgart, Germany
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Leishmanicidal and antimicrobial activity of primin and primin-containing extracts from Miconia willdenowii. Fitoterapia 2019; 138:104297. [PMID: 31404617 DOI: 10.1016/j.fitote.2019.104297] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Revised: 08/06/2019] [Accepted: 08/06/2019] [Indexed: 11/23/2022]
Abstract
As a part of an ongoing bioprospective project, searching for potential medicinal plants from the Brazilian Atlantic Forest, Miconia willdenowii was selected for its potential leishmanicidal and antimicrobial activities. The crude ethanolic extract of M. willdenowii showed an inhibition of 99.7% of the promastigote forms of Leishmania amazonensis at the concentration of 80 μg/mL. Further investigation of its antimicrobial activity against pathogenic fungi and Gram positive and negative bacteria, revealed a significant antimicrobial activity. A bioguided study with its liquid-liquid partition fractions revealed the hexane fraction (Hex) as the most active against Leishmania, inhibiting 99.2% and 46.9% of the protozoan at concentrations of 40 and 20 μg/mL, respectively. Hex also showed significant antimicrobial activity against Staphylococcus aureus and Candida krusei with IC50 of 15.6 and 62.5 μg/mL, respectively. Purification of Hex led to the isolation of 2-methoxy-6-pentyl-benzoquinone (1, also known as primin) as the active metabolite, probably responsible for the observed antimicrobial and anti-leishmania effects. Primin (1) disclosed leishmanicidal activity (IC50 = 1.25 μM), showing higher potency than the standard drug amphotericin B (IC50 = 5.08 μM), with additional antifungal effects against all tested fungi species. Compound 1 also showed significant activity against S. aureus (IC50 = 8.94 μM), showing a comparable potency with the reference drug chloramphenicol (IC50 = 6.19 μM), but with a potential cytotoxicity towards peripheral human blood mononuclear cells (CC50 = 255.15 μM). Here in, the antimicrobial and anti-L. amazonensis effects of M. willdenowii are reported for the first time, as well as Primin (1) as its probable bioactive metabolite.
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Kim HY, Saurí J, Cohen RD, Martin GE. Observation of untoward 3 J cc correlations in 1,1-ADEQUATE spectra of pyrimidine analogs: Avoiding potential interpretation pitfalls. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2018; 56:775-781. [PMID: 29603782 DOI: 10.1002/mrc.4736] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Revised: 03/19/2018] [Accepted: 03/20/2018] [Indexed: 06/08/2023]
Abstract
Recently, it has been reported that large n JCC correlations can sometimes be observed in 1,1-ADEQUATE spectra with significant intensity, which opens the possibility of structural misassignment. In this work, we have focused on pyrimidine-based compounds, which exhibit multiple bond correlations in the 1,1-ADEQUATE experiment as a consequence of 3 JCC coupling constants greater than 10 Hz. Results are supported by both the experimental measurement of 3 JCC coupling constants in question using J-modulated-ADEQUATE and density functional theory calculations.
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Affiliation(s)
- Hai-Young Kim
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co., Inc., 33 Avenue Louis Pasteur, Boston, MA, 02115, USA
| | - Josep Saurí
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co., Inc., 33 Avenue Louis Pasteur, Boston, MA, 02115, USA
| | - Ryan D Cohen
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co., Inc., P.O. Box 2000, Rahway, NJ, 07065, USA
| | - Gary E Martin
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co., Inc., P.O. Box 2000, Rahway, NJ, 07065, USA
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Gutiérrez-Bonet Á, Remeur C, Matsui JK, Molander GA. Late-Stage C-H Alkylation of Heterocycles and 1,4-Quinones via Oxidative Homolysis of 1,4-Dihydropyridines. J Am Chem Soc 2017; 139:12251-12258. [PMID: 28832137 PMCID: PMC5599171 DOI: 10.1021/jacs.7b05899] [Citation(s) in RCA: 201] [Impact Index Per Article: 25.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Under oxidative conditions, 1,4-dihydropyridines (DHPs) undergo a homolytic cleavage, forming exclusively a Csp3-centered radical that can engage in the C-H alkylation of heterocyclic bases and 1,4-quinones. DHPs are readily prepared from aldehydes, and considering that aldehydes normally require harsh reaction conditions to take part in such transformations, with mixtures of alkylated and acylated products often being obtained, this net decarbonylative alkylation approach becomes particularly useful. The present method takes place under mild reaction conditions and requires only persulfate as a stoichiometric oxidant, making the procedure suitable for the late-stage C-H alkylation of complex molecules. Notably, structurally complex pharmaceutical agents could be functionalized or prepared with this protocol, such as the antimalarial Atovaquone and antitheilerial Parvaquone, thus evidencing its applicability. Mechanistic studies revealed a likely radical chain process via the formation of a dearomatized intermediate, providing a deeper understanding of the factors governing the reactivity of these radical forebears.
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Affiliation(s)
| | | | - Jennifer K. Matsui
- Roy and Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, United States
| | - Gary A. Molander
- Roy and Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, United States
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Sisa M, Dvorakova M, Vanek T. Concise access to primin, miconidin and related natural resorcinols. Tetrahedron 2017. [DOI: 10.1016/j.tet.2017.07.029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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Fang G, Cong X, Zanoni G, Liu Q, Bi X. Silver-Based Radical Reactions: Development and Insights. Adv Synth Catal 2017. [DOI: 10.1002/adsc.201601179] [Citation(s) in RCA: 82] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Guichun Fang
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Department of Chemistry; Northeast Normal University; Changchun 130024 People's Republic of China
| | - Xuefeng Cong
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Department of Chemistry; Northeast Normal University; Changchun 130024 People's Republic of China
| | - Giuseppe Zanoni
- Department of Chemistry; University of Pavia; Viale Taramelli 10 27100 Pavia Italy
| | - Qun Liu
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Department of Chemistry; Northeast Normal University; Changchun 130024 People's Republic of China
| | - Xihe Bi
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Department of Chemistry; Northeast Normal University; Changchun 130024 People's Republic of China
- State Key Laboratory of Elemento-Organic Chemistry; Nankai University, Tianjin; 300071 People's Republic of China
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Yan M, Lo JC, Edwards JT, Baran PS. Radicals: Reactive Intermediates with Translational Potential. J Am Chem Soc 2016; 138:12692-12714. [PMID: 27631602 PMCID: PMC5054485 DOI: 10.1021/jacs.6b08856] [Citation(s) in RCA: 712] [Impact Index Per Article: 79.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Indexed: 02/08/2023]
Abstract
This Perspective illustrates the defining characteristics of free radical chemistry, beginning with its rich and storied history. Studies from our laboratory are discussed along with recent developments emanating from others in this burgeoning area. The practicality and chemoselectivity of radical reactions enable rapid access to molecules of relevance to drug discovery, agrochemistry, material science, and other disciplines. Thus, these reactive intermediates possess inherent translational potential, as they can be widely used to expedite scientific endeavors for the betterment of humankind.
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Affiliation(s)
- Ming Yan
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Julian C. Lo
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Jacob T. Edwards
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Phil S. Baran
- Department
of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
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