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Harmange Magnani C, Hernández-Meléndez JR, Tantillo DJ, Maimone TJ. Total Synthesis of Altemicidin: A Surprise Ending for a Monoterpene Alkaloid. JACS AU 2023; 3:2883-2893. [PMID: 37885570 PMCID: PMC10598567 DOI: 10.1021/jacsau.3c00417] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 09/21/2023] [Accepted: 09/21/2023] [Indexed: 10/28/2023]
Abstract
Monoterpene alkaloids encompass distinct chemical diversity and wide-ranging bioactivity. Their compact complexity has made them popular as synthetic targets and has inspired many distinct strategies and tactics in the field of heterocyclic chemistry. This article documents the evolution of a synthetic program aimed at accessing the unusual sulfonamide-containing natural product altemicidin, which was generally believed to be a monoterpene alkaloid throughout our entire synthetic investigations but has recently been found to originate through an unexpected and quite disparate biosynthetic pathway. By leveraging a pyridine dearomatization/cycloaddition strategy, we developed a concise pathway to the 5,6-fused bicyclic azaindane core and, after significant experimentation, an ultimate synthesis of altemicidin itself. Tactics to productively manipulate the multiple functional groups present on this highly polar scaffold proved challenging but were eventually realized via several carefully orchestrated and chemoselective transformations-investments that paid dividends in the form of significantly shorter chemical synthesis. Surprisingly, the bond-forming logic between our presumed abiotic synthetic strategy to this alkaloid class and its subsequently identified biosynthetic pathway is eerily similar.
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Affiliation(s)
- Claire
S. Harmange Magnani
- Department
of Chemistry, University of California,
Berkeley, 826 Latimer Hall, Berkeley, California 94720, United States
| | - José R. Hernández-Meléndez
- Department
of Chemistry, University of California,
Berkeley, 826 Latimer Hall, Berkeley, California 94720, United States
| | - Dean J. Tantillo
- Department
of Chemistry, University of California−Davis; 1 Shields Avenue, Davis, California 95616, United States
| | - Thomas J. Maimone
- Department
of Chemistry, University of California,
Berkeley, 826 Latimer Hall, Berkeley, California 94720, United States
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2
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Harmange Magnani CS, Maimone TJ. Dearomative Synthetic Entry into the Altemicidin Alkaloids. J Am Chem Soc 2021; 143:7935-7939. [PMID: 34018391 DOI: 10.1021/jacs.1c04147] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Altemicidin and related Streptomyces-derived monoterpene alkaloids possess dense, highly polar azaindane cores as well as potent cytotoxic and tRNA synthetase inhibitory properties. The congested α-amino acid motif decorating their presumed iridoid-like core structure has proven to be both a synthetic challenge and a biosynthetic mystery to date. Herein, we report a distinct, abiotic strategy to these alkaloids resulting in a concise synthesis of altemicidin from simple chemical feedstocks. Key chemical findings include the exploitation of a dearomative pyridinium addition and dipolar cycloaddition sequence to stereospecifically install the quaternary amine moiety, and a chemoselective molybdenum-mediated double reduction to establish the fully functionalized azaindane nucleus with minimal redox manipulations.
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Affiliation(s)
- Claire S Harmange Magnani
- Department of Chemistry, University of California-Berkeley, 826 Latimer Hall, Berkeley, California 94720, United States
| | - Thomas J Maimone
- Department of Chemistry, University of California-Berkeley, 826 Latimer Hall, Berkeley, California 94720, United States
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3
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Chernysheva GN, Katerinich MD, Ushakov IA, Rozentsveig IB. Diels–Alder trapping vs. amidoalkylation of cyclopentadiene with polychloroacetaldehyde sulfonylimines. MENDELEEV COMMUNICATIONS 2020. [DOI: 10.1016/j.mencom.2020.09.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Hayakawa I, Nagayasu A, Sakakura A. Toward the Synthesis of SB-203207: Construction of Four Contiguous Nitrogen-Containing Stereogenic Centers. J Org Chem 2019; 84:15614-15623. [PMID: 31702152 DOI: 10.1021/acs.joc.9b02627] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
SB-203207 is an altemicidin-type alkaloid that potently inhibits isoleucyl tRNA synthetase activity. Its main structural feature is a hexahydro-6-azaindene framework containing a unique β-hydroxy α,α-disubstituted α-amino acid moiety on the cyclopentane portion. Herein we have established a method for constructing the four contiguous nitrogen-containing stereogenic centers of SB-203207 by using as key steps the stereoselective alkylation of bowl-shaped tricyclic lactone to construct a quaternary carbon at C1, the stereoselective hydroboration-oxidation reaction to install the C2 hydroxy group, and the Curtius rearrangement to introduce a nitrogen atom onto the C1 quaternary carbon.
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Affiliation(s)
- Ichiro Hayakawa
- Division of Applied Chemistry, Graduate School of Natural Science and Technology , Okayama University , 3-1-1 Tsushima-naka , Kita-ku, Okayama 700-8530 , Japan
| | - Anna Nagayasu
- Division of Applied Chemistry, Graduate School of Natural Science and Technology , Okayama University , 3-1-1 Tsushima-naka , Kita-ku, Okayama 700-8530 , Japan
| | - Akira Sakakura
- Division of Applied Chemistry, Graduate School of Natural Science and Technology , Okayama University , 3-1-1 Tsushima-naka , Kita-ku, Okayama 700-8530 , Japan
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5
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Dorovatovskii PV, Sadigova ND, Huseynzada AE, Hajiyeva SF, Cárdenas A, Cisterna J, Brito I. Crystal structure of dimethyl (3aS,6R,6aS,7S)-2-pivaloyl-2,3-dihydro-1 H,6 H,7 H-3a,6:7,9a-diepoxybenzo[de]isoquinoline-3a1,6a-dicarboxylate, C 21H 25NO 8. Z KRIST-NEW CRYST ST 2019. [DOI: 10.1515/ncrs-2018-0192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
C21H25NO8 , P21/n, (no. 14), a = 12.905(3) Å, b = 13.370(3) Å, c = 13.090(3) Å, β = 118.19(3)°, V = 1990.5(8) Å3, Z = 4, R
gt(F) = 0.0629, wR
ref(F
2) = 0.1966, T = 100(2) K.
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Affiliation(s)
| | - Nurlana D. Sadigova
- Organic Chemistry Department , Baku State University , Z. Xalilov Str. 23, Az , 1148 Baku , Azerbaijan
| | - Alakbar E. Huseynzada
- Organic Chemistry Department , Baku State University , Z. Xalilov Str. 23, Az , 1148 Baku , Azerbaijan
| | - Sarvinaz F. Hajiyeva
- Organic Chemistry Department , Baku State University , Z. Xalilov Str. 23, Az , 1148 Baku , Azerbaijan
| | - Alejandro Cárdenas
- Departamento de Física, Facultad de Ciencias Básicas , Universidad de Antofagasta , Casilla 170 , Antofagasta , Chile
| | - Jonathan Cisterna
- Departamento de Química, Facultad de Ciencias Básicas , Universidad de Antofagasta , Casilla 170 , Antofagasta , Chile
| | - Iván Brito
- Departamento de Química, Facultad de Ciencias Básicas , Universidad de Antofagasta , Casilla 170 , Antofagasta , Chile
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6
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Mahmoud AG, Guedes da Silva MFC, Mahmudov KT, Pombeiro AJL. Arylhydrazone ligands as Cu-protectors and -catalysis promoters in the azide-alkyne cycloaddition reaction. Dalton Trans 2019; 48:1774-1785. [PMID: 30640328 DOI: 10.1039/c8dt04771e] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
A series of water soluble copper(ii) complexes, [Cu(κO1O2N-H2L1)(H2O)2]·2H2O (2), [Cu(κO-H3L1)2(H2O)4] (3), [Cu(κO-H4L2)2(H2O)4] (5) and [Cu(H2O)6]·2H2L3·2(CH3)2NCHO (7), were prepared by the reaction of Cu(NO3)2·3H2O with sodium (Z)-2-(2-(1-amino-1,3-dioxobutan-2-ylidene)hydrazineyl)benzenesulfonate, [Na(μ4-1:2κO1,2κO2,3κO3,4κO4-H3L1)]n (1; for 2 and 3), sodium (Z)-3-(2-(1-amino-1,3-dioxobutan-2-ylidene)hydrazineyl)-4-hydroxybenzene-sulfonate, [Na(μ-1κO1,2κO2-H4L2)]2 (4; for 5) or sodium (Z)-2-(2-(1,3-dioxo-1-(phenylamino)butan-2-ylidene)hydrazineyl)naphthalene-1-sulfonate, [Na(μ-1κO1O2,2κO3-H2L3)(CH3OH)2]2 (6; for 7). Compounds 1-7 were fully characterized, also by single-crystal X-ray diffraction analysis, and applied as homogeneous catalysts for the azide-alkyne cycloaddition (AAC) reaction to afford 1,4-disubstituted 1,2,3-triazoles. A structure-catalytic activity relationship has been recognized for the first time on the basis of the occurrence of resonance- and charge-assisted hydrogen bond interactions (RAHB and CAHB), in charge and ligand binding modes, enabling the catalytic activity of the compounds to be ordered as follows: Cu(NO3)2≪7 (complex salt with RAHB and CAHB) < 3 (with RAHB and CAHB) < 5 (with RAHB) < 2 (neither RAHB nor CAHB). Complex 2, without such non-covalent interactions, was found to be the most efficient catalyst for the AAC reaction, affording up to 98% product yield after being placed for 15 min, at 125 °C, in a water/acetonitrile mixture under low power (10 W) MW irradiation.
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Affiliation(s)
- Abdallah G Mahmoud
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal. and Department of Chemistry, Faculty of Science, Helwan University, Ain Helwan, 11795 Cairo, Egypt
| | - M Fátima C Guedes da Silva
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - Kamran T Mahmudov
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal. and Department of Chemistry, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan.
| | - Armando J L Pombeiro
- Centro de Química Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
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7
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Atioğlu Z, Akkurt M, Toze FAA, Huseynov FE, Hajiyeva SF. Crystal structure and Hirshfeld surface analysis of ethane-1,2-diaminium 3-[2-(1,3-dioxo-1,3-di-phenyl-propan-2-yl-idene)hydrazin-yl]-5-nitro-2-oxido-benzene-sulfonate dihydrate. Acta Crystallogr E Crystallogr Commun 2018; 74:1021-1025. [PMID: 30002908 PMCID: PMC6038648 DOI: 10.1107/s2056989018009118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Accepted: 06/22/2018] [Indexed: 11/10/2022]
Abstract
In the anion of the title hydrated salt, C2H10N22+·C21H13N3O8S2-·2H2O, the planes of the phenyl rings and the benzene ring of the 5-nitro-2-oxido-benzene-sulfonate group are inclined to one another by 44.42 (11), 56.87 (11) and 77.70 (12)°. In the crystal, the anions are linked to the cations and the water mol-ecules by N-H⋯O and O-H⋯O hydrogen bonds, forming a three-dimensional network. Furthermore, there are face-to-face π-π stacking inter-actions between the centroids of one phenyl ring and the benzene ring of the 5-nitro-2-oxido-benzene-sulfonate group [centroid-centroid distance = 3.8382 (13) Å and slippage = 1.841 Å]. A Hirshfeld surface analysis was conducted to verify the contributions of the different inter-molecular inter-actions.
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Affiliation(s)
- Zeliha Atioğlu
- İlke Education and Health Foundation, Cappadocia University, Cappadocia Vocational College, The Medical Imaging Techniques Program, 50420 Mustafapaşa, Ürgüp, Nevşehir, Turkey
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Flavien A. A. Toze
- Department of Chemistry, Faculty of Sciences, University of Douala, PO Box 24157, Douala, Republic of , Cameroon
| | - Fatali E. Huseynov
- Department of Ecology and Soil Sciences, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan
| | - Sarvinaz F. Hajiyeva
- Organic Chemistry Department, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan
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Atioğlu Z, Akkurt M, Toze FAA, Mammadova GZ, Panahova HM. Crystal structure and Hirshfeld surface analysis of 3,3',3''-[(1,3,5-triazine-2,4,6-tri-yl)tris-(-oxy)]tris-(5,5-di-methyl-cyclo-hex-2-en-1-one). Acta Crystallogr E Crystallogr Commun 2018; 74:1035-1038. [PMID: 30002911 PMCID: PMC6038646 DOI: 10.1107/s2056989018009003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2018] [Accepted: 06/20/2018] [Indexed: 11/28/2022]
Abstract
The three cyclo-hexenone rings of the title compound, C27H33N3O6, adopt slightly distorted envelope conformations, with the C atom bearing two methyl groups as the flap atom in each case. These cyclo-hexenone mean planes form dihedral angles of 87.41 (11), 70.73 (11) and 70.47 (11)° with the 1,3,5-triazine ring, while the dihedral angle between the cyclo-hexenone mean planes are 57.52 (12), 23.75 (12) and 53.21 (12)°. In the crystal, mol-ecules are linked via C-H⋯O hydrogen bonds, forming a three-dimensional network.
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Affiliation(s)
- Zeliha Atioğlu
- İlke Education and Health Foundation, Cappadocia University, Cappadocia Vocational College, The Medical Imaging Techniques Program, 50420 Mustafapaşa, Ürgüp, Nevşehir, Turkey
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Flavien A. A. Toze
- Department of Chemistry, Faculty of Sciences, University of Douala, PO Box 24157, Douala, Republic of Cameroon
| | - Gunay Z. Mammadova
- Organic Chemistry Department, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan
| | - Humay M. Panahova
- State Economic University of Azerbaijan, Istiqlaliyyat St, 6, AZ1001, Baku, Azerbaijan
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